co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G09020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
2	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
3	GO:0043069: negative regulation of programmed cell death	2.65E-06
4	GO:0009617: response to bacterium	1.94E-05
5	GO:0071456: cellular response to hypoxia	2.01E-05
6	GO:0009759: indole glucosinolate biosynthetic process	2.72E-05
7	GO:0070370: cellular heat acclimation	5.19E-05
8	GO:0010120: camalexin biosynthetic process	8.55E-05
9	GO:0080136: priming of cellular response to stress	1.12E-04
10	GO:0006643: membrane lipid metabolic process	1.12E-04
11	GO:1902065: response to L-glutamate	1.12E-04
12	GO:0006144: purine nucleobase metabolic process	1.12E-04
13	GO:0010266: response to vitamin B1	1.12E-04
14	GO:0019628: urate catabolic process	1.12E-04
15	GO:0051245: negative regulation of cellular defense response	1.12E-04
16	GO:0010941: regulation of cell death	1.12E-04
17	GO:0009682: induced systemic resistance	1.78E-04
18	GO:0052544: defense response by callose deposition in cell wall	1.78E-04
19	GO:0019483: beta-alanine biosynthetic process	2.61E-04
20	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.61E-04
21	GO:0019441: tryptophan catabolic process to kynurenine	2.61E-04
22	GO:0015914: phospholipid transport	2.61E-04
23	GO:0002215: defense response to nematode	2.61E-04
24	GO:0006212: uracil catabolic process	2.61E-04
25	GO:0034605: cellular response to heat	2.68E-04
26	GO:0042343: indole glucosinolate metabolic process	3.01E-04
27	GO:0042742: defense response to bacterium	3.12E-04
28	GO:0009738: abscisic acid-activated signaling pathway	3.79E-04
29	GO:0006970: response to osmotic stress	3.80E-04
30	GO:0010359: regulation of anion channel activity	4.32E-04
31	GO:0048281: inflorescence morphogenesis	4.32E-04
32	GO:0035556: intracellular signal transduction	4.45E-04
33	GO:0010200: response to chitin	4.98E-04
34	GO:0046777: protein autophosphorylation	5.24E-04
35	GO:0006612: protein targeting to membrane	6.19E-04
36	GO:0048530: fruit morphogenesis	6.19E-04
37	GO:0019438: aromatic compound biosynthetic process	6.19E-04
38	GO:0048194: Golgi vesicle budding	6.19E-04
39	GO:0018105: peptidyl-serine phosphorylation	6.68E-04
40	GO:0061025: membrane fusion	7.87E-04
41	GO:0010508: positive regulation of autophagy	8.23E-04
42	GO:2000038: regulation of stomatal complex development	8.23E-04
43	GO:0080142: regulation of salicylic acid biosynthetic process	8.23E-04
44	GO:0010222: stem vascular tissue pattern formation	8.23E-04
45	GO:0010483: pollen tube reception	8.23E-04
46	GO:1902584: positive regulation of response to water deprivation	8.23E-04
47	GO:0010363: regulation of plant-type hypersensitive response	8.23E-04
48	GO:0022622: root system development	8.23E-04
49	GO:0006891: intra-Golgi vesicle-mediated transport	8.98E-04
50	GO:0009697: salicylic acid biosynthetic process	1.04E-03
51	GO:0030308: negative regulation of cell growth	1.04E-03
52	GO:1902456: regulation of stomatal opening	1.27E-03
53	GO:0009816: defense response to bacterium, incompatible interaction	1.35E-03
54	GO:0009612: response to mechanical stimulus	1.52E-03
55	GO:0010199: organ boundary specification between lateral organs and the meristem	1.52E-03
56	GO:2000037: regulation of stomatal complex patterning	1.52E-03
57	GO:0000911: cytokinesis by cell plate formation	1.52E-03
58	GO:0008219: cell death	1.65E-03
59	GO:0010044: response to aluminum ion	1.78E-03
60	GO:0046470: phosphatidylcholine metabolic process	1.78E-03
61	GO:0010119: regulation of stomatal movement	1.91E-03
62	GO:0009061: anaerobic respiration	2.06E-03
63	GO:0009819: drought recovery	2.06E-03
64	GO:0009867: jasmonic acid mediated signaling pathway	2.08E-03
65	GO:0045087: innate immune response	2.08E-03
66	GO:0006468: protein phosphorylation	2.14E-03
67	GO:0043562: cellular response to nitrogen levels	2.35E-03
68	GO:0009808: lignin metabolic process	2.35E-03
69	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.35E-03
70	GO:0010112: regulation of systemic acquired resistance	2.66E-03
71	GO:0048268: clathrin coat assembly	2.97E-03
72	GO:0006952: defense response	3.06E-03
73	GO:0009651: response to salt stress	3.49E-03
74	GO:0030148: sphingolipid biosynthetic process	3.65E-03
75	GO:0006886: intracellular protein transport	3.76E-03
76	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	4.00E-03
77	GO:0071365: cellular response to auxin stimulus	4.00E-03
78	GO:0002213: defense response to insect	4.00E-03
79	GO:0010229: inflorescence development	4.36E-03
80	GO:0009626: plant-type hypersensitive response	4.52E-03
81	GO:0002237: response to molecule of bacterial origin	4.74E-03
82	GO:0070588: calcium ion transmembrane transport	5.13E-03
83	GO:0007031: peroxisome organization	5.13E-03
84	GO:0009737: response to abscisic acid	5.24E-03
85	GO:2000377: regulation of reactive oxygen species metabolic process	5.93E-03
86	GO:0009863: salicylic acid mediated signaling pathway	5.93E-03
87	GO:0006979: response to oxidative stress	5.97E-03
88	GO:0031408: oxylipin biosynthetic process	6.78E-03
89	GO:0048278: vesicle docking	6.78E-03
90	GO:0009625: response to insect	7.67E-03
91	GO:0006012: galactose metabolic process	7.67E-03
92	GO:0071215: cellular response to abscisic acid stimulus	7.67E-03
93	GO:0009306: protein secretion	8.13E-03
94	GO:0010584: pollen exine formation	8.13E-03
95	GO:0015031: protein transport	8.48E-03
96	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.60E-03
97	GO:0042147: retrograde transport, endosome to Golgi	8.60E-03
98	GO:0050832: defense response to fungus	9.33E-03
99	GO:0009409: response to cold	9.33E-03
100	GO:0008360: regulation of cell shape	9.57E-03
101	GO:0010197: polar nucleus fusion	9.57E-03
102	GO:0046323: glucose import	9.57E-03
103	GO:0010468: regulation of gene expression	1.05E-02
104	GO:0008654: phospholipid biosynthetic process	1.06E-02
105	GO:0006623: protein targeting to vacuole	1.06E-02
106	GO:0010183: pollen tube guidance	1.06E-02
107	GO:0046686: response to cadmium ion	1.15E-02
108	GO:0019760: glucosinolate metabolic process	1.27E-02
109	GO:0006904: vesicle docking involved in exocytosis	1.33E-02
110	GO:0051607: defense response to virus	1.38E-02
111	GO:0000910: cytokinesis	1.38E-02
112	GO:0009607: response to biotic stimulus	1.50E-02
113	GO:0006906: vesicle fusion	1.56E-02
114	GO:0009627: systemic acquired resistance	1.56E-02
115	GO:0006950: response to stress	1.62E-02
116	GO:0048481: plant ovule development	1.74E-02
117	GO:0009817: defense response to fungus, incompatible interaction	1.74E-02
118	GO:0007165: signal transduction	1.78E-02
119	GO:0010311: lateral root formation	1.80E-02
120	GO:0009813: flavonoid biosynthetic process	1.80E-02
121	GO:0006499: N-terminal protein myristoylation	1.86E-02
122	GO:0009407: toxin catabolic process	1.86E-02
123	GO:0006099: tricarboxylic acid cycle	2.12E-02
124	GO:0009414: response to water deprivation	2.31E-02
125	GO:0006887: exocytosis	2.32E-02
126	GO:0006897: endocytosis	2.32E-02
127	GO:0032259: methylation	2.40E-02
128	GO:0016042: lipid catabolic process	2.43E-02
129	GO:0051707: response to other organism	2.46E-02
130	GO:0009636: response to toxic substance	2.67E-02
131	GO:0009753: response to jasmonic acid	2.69E-02
132	GO:0031347: regulation of defense response	2.82E-02
133	GO:0009846: pollen germination	2.89E-02
134	GO:0006486: protein glycosylation	3.04E-02
135	GO:0010224: response to UV-B	3.12E-02
136	GO:0048367: shoot system development	3.51E-02
137	GO:0009742: brassinosteroid mediated signaling pathway	4.08E-02
138	GO:0009611: response to wounding	4.52E-02
139	GO:0055114: oxidation-reduction process	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
2	GO:0004846: urate oxidase activity	0.00E+00
3	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
4	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
5	GO:0004157: dihydropyrimidinase activity	0.00E+00
6	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
7	GO:0004168: dolichol kinase activity	0.00E+00
8	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
9	GO:0005516: calmodulin binding	1.68E-07
10	GO:0004707: MAP kinase activity	1.73E-05
11	GO:0015168: glycerol transmembrane transporter activity	1.12E-04
12	GO:2001147: camalexin binding	1.12E-04
13	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.12E-04
14	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.12E-04
15	GO:2001227: quercitrin binding	1.12E-04
16	GO:0004683: calmodulin-dependent protein kinase activity	1.22E-04
17	GO:0016301: kinase activity	2.57E-04
18	GO:0045140: inositol phosphoceramide synthase activity	2.61E-04
19	GO:0004061: arylformamidase activity	2.61E-04
20	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	4.32E-04
21	GO:0016595: glutamate binding	4.32E-04
22	GO:0005354: galactose transmembrane transporter activity	6.19E-04
23	GO:0004672: protein kinase activity	6.85E-04
24	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	8.23E-04
25	GO:0005496: steroid binding	1.04E-03
26	GO:0045431: flavonol synthase activity	1.04E-03
27	GO:0015145: monosaccharide transmembrane transporter activity	1.04E-03
28	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.04E-03
29	GO:0005509: calcium ion binding	1.21E-03
30	GO:0004605: phosphatidate cytidylyltransferase activity	1.27E-03
31	GO:0004012: phospholipid-translocating ATPase activity	1.52E-03
32	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.57E-03
33	GO:0043295: glutathione binding	1.78E-03
34	GO:0004620: phospholipase activity	1.78E-03
35	GO:0004033: aldo-keto reductase (NADP) activity	2.06E-03
36	GO:0004034: aldose 1-epimerase activity	2.06E-03
37	GO:0003843: 1,3-beta-D-glucan synthase activity	2.35E-03
38	GO:0004630: phospholipase D activity	2.35E-03
39	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.35E-03
40	GO:0071949: FAD binding	2.66E-03
41	GO:0005484: SNAP receptor activity	2.68E-03
42	GO:0008171: O-methyltransferase activity	3.30E-03
43	GO:0005545: 1-phosphatidylinositol binding	3.30E-03
44	GO:0004713: protein tyrosine kinase activity	3.30E-03
45	GO:0005543: phospholipid binding	3.65E-03
46	GO:0047372: acylglycerol lipase activity	3.65E-03
47	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.36E-03
48	GO:0004022: alcohol dehydrogenase (NAD) activity	4.36E-03
49	GO:0005388: calcium-transporting ATPase activity	4.36E-03
50	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.74E-03
51	GO:0015144: carbohydrate transmembrane transporter activity	7.62E-03
52	GO:0008565: protein transporter activity	7.62E-03
53	GO:0005351: sugar:proton symporter activity	8.60E-03
54	GO:0005524: ATP binding	8.62E-03
55	GO:0030276: clathrin binding	9.57E-03
56	GO:0008080: N-acetyltransferase activity	9.57E-03
57	GO:0010181: FMN binding	1.01E-02
58	GO:0005355: glucose transmembrane transporter activity	1.01E-02
59	GO:0016853: isomerase activity	1.01E-02
60	GO:0008168: methyltransferase activity	1.31E-02
61	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.33E-02
62	GO:0051213: dioxygenase activity	1.44E-02
63	GO:0043531: ADP binding	1.50E-02
64	GO:0050897: cobalt ion binding	1.93E-02
65	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.06E-02
66	GO:0005515: protein binding	2.17E-02
67	GO:0000149: SNARE binding	2.19E-02
68	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.19E-02
69	GO:0004674: protein serine/threonine kinase activity	2.22E-02
70	GO:0043565: sequence-specific DNA binding	2.37E-02
71	GO:0004364: glutathione transferase activity	2.39E-02
72	GO:0016298: lipase activity	3.12E-02
73	GO:0008234: cysteine-type peptidase activity	3.27E-02
74	GO:0016491: oxidoreductase activity	3.36E-02
75	GO:0045735: nutrient reservoir activity	3.43E-02
76	GO:0016746: transferase activity, transferring acyl groups	3.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.64E-06
2	GO:0045252: oxoglutarate dehydrogenase complex	1.12E-04
3	GO:0009898: cytoplasmic side of plasma membrane	8.23E-04
4	GO:0009504: cell plate	8.42E-04
5	GO:0005802: trans-Golgi network	9.27E-04
6	GO:0016021: integral component of membrane	1.40E-03
7	GO:0016020: membrane	1.91E-03
8	GO:0000148: 1,3-beta-D-glucan synthase complex	2.35E-03
9	GO:0005794: Golgi apparatus	2.37E-03
10	GO:0017119: Golgi transport complex	3.30E-03
11	GO:0012505: endomembrane system	4.95E-03
12	GO:0030176: integral component of endoplasmic reticulum membrane	5.13E-03
13	GO:0005795: Golgi stack	5.13E-03
14	GO:0005905: clathrin-coated pit	6.78E-03
15	GO:0030136: clathrin-coated vesicle	8.60E-03
16	GO:0019898: extrinsic component of membrane	1.06E-02
17	GO:0005829: cytosol	1.27E-02
18	GO:0005783: endoplasmic reticulum	1.45E-02
19	GO:0005618: cell wall	1.54E-02
20	GO:0005768: endosome	2.09E-02
21	GO:0031902: late endosome membrane	2.32E-02
22	GO:0031201: SNARE complex	2.32E-02
23	GO:0005856: cytoskeleton	2.67E-02
24	GO:0005887: integral component of plasma membrane	3.40E-02
25	GO:0000139: Golgi membrane	3.47E-02
26	GO:0010008: endosome membrane	3.51E-02
27	GO:0009524: phragmoplast	4.76E-02