Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G08600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015805: S-adenosyl-L-methionine transport0.00E+00
2GO:0042493: response to drug0.00E+00
3GO:0097164: ammonium ion metabolic process0.00E+00
4GO:0006833: water transport1.12E-05
5GO:0010442: guard cell morphogenesis1.16E-04
6GO:0042371: vitamin K biosynthetic process1.16E-04
7GO:0046167: glycerol-3-phosphate biosynthetic process1.16E-04
8GO:1902458: positive regulation of stomatal opening1.16E-04
9GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.16E-04
10GO:0046520: sphingoid biosynthetic process1.16E-04
11GO:0010411: xyloglucan metabolic process1.30E-04
12GO:0006631: fatty acid metabolic process2.66E-04
13GO:0010115: regulation of abscisic acid biosynthetic process2.69E-04
14GO:0070981: L-asparagine biosynthetic process2.69E-04
15GO:0006529: asparagine biosynthetic process2.69E-04
16GO:1903426: regulation of reactive oxygen species biosynthetic process2.69E-04
17GO:0052541: plant-type cell wall cellulose metabolic process2.69E-04
18GO:0006650: glycerophospholipid metabolic process2.69E-04
19GO:0042546: cell wall biogenesis3.12E-04
20GO:0009826: unidimensional cell growth3.42E-04
21GO:0042254: ribosome biogenesis3.74E-04
22GO:0046168: glycerol-3-phosphate catabolic process4.45E-04
23GO:0015840: urea transport4.45E-04
24GO:0009650: UV protection6.38E-04
25GO:0046739: transport of virus in multicellular host6.38E-04
26GO:0006072: glycerol-3-phosphate metabolic process6.38E-04
27GO:0051016: barbed-end actin filament capping6.38E-04
28GO:0034220: ion transmembrane transport7.13E-04
29GO:0042335: cuticle development7.13E-04
30GO:0015689: molybdate ion transport8.47E-04
31GO:0006183: GTP biosynthetic process8.47E-04
32GO:0016132: brassinosteroid biosynthetic process9.38E-04
33GO:0010583: response to cyclopentenone9.98E-04
34GO:0045038: protein import into chloroplast thylakoid membrane1.07E-03
35GO:0048359: mucilage metabolic process involved in seed coat development1.07E-03
36GO:0016126: sterol biosynthetic process1.33E-03
37GO:0042372: phylloquinone biosynthetic process1.56E-03
38GO:0006694: steroid biosynthetic process1.56E-03
39GO:0009610: response to symbiotic fungus1.84E-03
40GO:0051693: actin filament capping1.84E-03
41GO:0030497: fatty acid elongation1.84E-03
42GO:2000070: regulation of response to water deprivation2.13E-03
43GO:0006526: arginine biosynthetic process2.43E-03
44GO:0009808: lignin metabolic process2.43E-03
45GO:0009932: cell tip growth2.43E-03
46GO:0015996: chlorophyll catabolic process2.43E-03
47GO:0007186: G-protein coupled receptor signaling pathway2.43E-03
48GO:0010497: plasmodesmata-mediated intercellular transport2.43E-03
49GO:0000902: cell morphogenesis2.74E-03
50GO:0015780: nucleotide-sugar transport2.74E-03
51GO:0010345: suberin biosynthetic process2.74E-03
52GO:0008643: carbohydrate transport3.03E-03
53GO:0043069: negative regulation of programmed cell death3.41E-03
54GO:0006949: syncytium formation3.41E-03
55GO:0042538: hyperosmotic salinity response3.50E-03
56GO:0000038: very long-chain fatty acid metabolic process3.76E-03
57GO:0045037: protein import into chloroplast stroma4.13E-03
58GO:0030036: actin cytoskeleton organization4.50E-03
59GO:0050826: response to freezing4.50E-03
60GO:0010207: photosystem II assembly4.89E-03
61GO:0007015: actin filament organization4.89E-03
62GO:0010143: cutin biosynthetic process4.89E-03
63GO:0006541: glutamine metabolic process4.89E-03
64GO:0055114: oxidation-reduction process4.91E-03
65GO:0010025: wax biosynthetic process5.70E-03
66GO:0006071: glycerol metabolic process5.70E-03
67GO:0009414: response to water deprivation6.10E-03
68GO:0005992: trehalose biosynthetic process6.12E-03
69GO:0000027: ribosomal large subunit assembly6.12E-03
70GO:0071555: cell wall organization6.32E-03
71GO:0010026: trichome differentiation6.56E-03
72GO:0009411: response to UV7.92E-03
73GO:0009831: plant-type cell wall modification involved in multidimensional cell growth7.92E-03
74GO:0006633: fatty acid biosynthetic process8.39E-03
75GO:0019722: calcium-mediated signaling8.40E-03
76GO:0006412: translation9.04E-03
77GO:0045490: pectin catabolic process9.21E-03
78GO:0006520: cellular amino acid metabolic process9.89E-03
79GO:0010182: sugar mediated signaling pathway9.89E-03
80GO:0009741: response to brassinosteroid9.89E-03
81GO:0009646: response to absence of light1.04E-02
82GO:0008654: phospholipid biosynthetic process1.09E-02
83GO:0009556: microsporogenesis1.09E-02
84GO:0006810: transport1.13E-02
85GO:0071554: cell wall organization or biogenesis1.15E-02
86GO:0002229: defense response to oomycetes1.15E-02
87GO:0005975: carbohydrate metabolic process1.19E-02
88GO:1901657: glycosyl compound metabolic process1.26E-02
89GO:0009828: plant-type cell wall loosening1.31E-02
90GO:0007267: cell-cell signaling1.37E-02
91GO:0055085: transmembrane transport1.40E-02
92GO:0010027: thylakoid membrane organization1.49E-02
93GO:0016311: dephosphorylation1.73E-02
94GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.84E-02
95GO:0000160: phosphorelay signal transduction system1.86E-02
96GO:0009813: flavonoid biosynthetic process1.86E-02
97GO:0009834: plant-type secondary cell wall biogenesis1.92E-02
98GO:0006839: mitochondrial transport2.33E-02
99GO:0006869: lipid transport2.33E-02
100GO:0051707: response to other organism2.54E-02
101GO:0009640: photomorphogenesis2.54E-02
102GO:0016042: lipid catabolic process2.55E-02
103GO:0006629: lipid metabolic process2.62E-02
104GO:0009664: plant-type cell wall organization2.99E-02
105GO:0009736: cytokinin-activated signaling pathway3.15E-02
106GO:0006364: rRNA processing3.15E-02
107GO:0006857: oligopeptide transport3.30E-02
108GO:0009735: response to cytokinin4.24E-02
109GO:0009416: response to light stimulus4.63E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
3GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
4GO:0050614: delta24-sterol reductase activity0.00E+00
5GO:0016762: xyloglucan:xyloglucosyl transferase activity5.85E-05
6GO:0015250: water channel activity1.02E-04
7GO:0015200: methylammonium transmembrane transporter activity1.16E-04
8GO:0000248: C-5 sterol desaturase activity1.16E-04
9GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity1.16E-04
10GO:0000170: sphingosine hydroxylase activity1.16E-04
11GO:0004560: alpha-L-fucosidase activity1.16E-04
12GO:0080132: fatty acid alpha-hydroxylase activity1.16E-04
13GO:0004071: aspartate-ammonia ligase activity1.16E-04
14GO:0016798: hydrolase activity, acting on glycosyl bonds1.30E-04
15GO:0003938: IMP dehydrogenase activity2.69E-04
16GO:0050062: long-chain-fatty-acyl-CoA reductase activity2.69E-04
17GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity2.69E-04
18GO:0042284: sphingolipid delta-4 desaturase activity2.69E-04
19GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity2.69E-04
20GO:0005504: fatty acid binding4.45E-04
21GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity4.45E-04
22GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor4.45E-04
23GO:0070330: aromatase activity4.45E-04
24GO:0030570: pectate lyase activity5.64E-04
25GO:0008514: organic anion transmembrane transporter activity6.12E-04
26GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.18E-04
27GO:0045430: chalcone isomerase activity8.47E-04
28GO:0015204: urea transmembrane transporter activity8.47E-04
29GO:0052793: pectin acetylesterase activity8.47E-04
30GO:0004506: squalene monooxygenase activity8.47E-04
31GO:0015098: molybdate ion transmembrane transporter activity8.47E-04
32GO:0019843: rRNA binding9.02E-04
33GO:0018685: alkane 1-monooxygenase activity1.07E-03
34GO:0009922: fatty acid elongase activity1.07E-03
35GO:0016208: AMP binding1.31E-03
36GO:0008519: ammonium transmembrane transporter activity1.31E-03
37GO:0003735: structural constituent of ribosome1.36E-03
38GO:0080019: fatty-acyl-CoA reductase (alcohol-forming) activity1.56E-03
39GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors2.74E-03
40GO:0008889: glycerophosphodiester phosphodiesterase activity2.74E-03
41GO:0051287: NAD binding3.38E-03
42GO:0004805: trehalose-phosphatase activity3.41E-03
43GO:0052689: carboxylic ester hydrolase activity3.46E-03
44GO:0008146: sulfotransferase activity5.29E-03
45GO:0102337: 3-oxo-cerotoyl-CoA synthase activity5.70E-03
46GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity5.70E-03
47GO:0102336: 3-oxo-arachidoyl-CoA synthase activity5.70E-03
48GO:0005528: FK506 binding6.12E-03
49GO:0005506: iron ion binding6.17E-03
50GO:0000156: phosphorelay response regulator activity1.26E-02
51GO:0051015: actin filament binding1.26E-02
52GO:0016722: oxidoreductase activity, oxidizing metal ions1.37E-02
53GO:0016413: O-acetyltransferase activity1.43E-02
54GO:0016788: hydrolase activity, acting on ester bonds1.46E-02
55GO:0005507: copper ion binding1.62E-02
56GO:0050660: flavin adenine dinucleotide binding1.66E-02
57GO:0102483: scopolin beta-glucosidase activity1.67E-02
58GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.99E-02
59GO:0003993: acid phosphatase activity2.19E-02
60GO:0042803: protein homodimerization activity2.23E-02
61GO:0008422: beta-glucosidase activity2.26E-02
62GO:0003824: catalytic activity2.84E-02
63GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.84E-02
64GO:0003690: double-stranded DNA binding3.22E-02
65GO:0003777: microtubule motor activity3.38E-02
66GO:0045735: nutrient reservoir activity3.54E-02
67GO:0008289: lipid binding3.64E-02
68GO:0004650: polygalacturonase activity3.79E-02
69GO:0016746: transferase activity, transferring acyl groups4.13E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0031225: anchored component of membrane2.94E-12
3GO:0046658: anchored component of plasma membrane7.39E-08
4GO:0009505: plant-type cell wall1.83E-06
5GO:0048046: apoplast9.33E-05
6GO:0005576: extracellular region1.04E-04
7GO:0008290: F-actin capping protein complex2.69E-04
8GO:0016020: membrane4.20E-04
9GO:0009528: plastid inner membrane4.45E-04
10GO:0009331: glycerol-3-phosphate dehydrogenase complex6.38E-04
11GO:0005886: plasma membrane7.16E-04
12GO:0009527: plastid outer membrane8.47E-04
13GO:0009507: chloroplast1.02E-03
14GO:0005840: ribosome1.64E-03
15GO:0042807: central vacuole1.84E-03
16GO:0009941: chloroplast envelope2.36E-03
17GO:0000326: protein storage vacuole2.43E-03
18GO:0031969: chloroplast membrane3.05E-03
19GO:0009506: plasmodesma3.20E-03
20GO:0005884: actin filament3.76E-03
21GO:0009570: chloroplast stroma4.86E-03
22GO:0009532: plastid stroma7.00E-03
23GO:0005887: integral component of plasma membrane7.36E-03
24GO:0022626: cytosolic ribosome9.78E-03
25GO:0005789: endoplasmic reticulum membrane1.20E-02
26GO:0009534: chloroplast thylakoid1.32E-02
27GO:0005778: peroxisomal membrane1.37E-02
28GO:0010319: stromule1.37E-02
29GO:0005618: cell wall1.66E-02
30GO:0005874: microtubule1.71E-02
31GO:0009707: chloroplast outer membrane1.80E-02
32GO:0022625: cytosolic large ribosomal subunit1.87E-02
33GO:0015934: large ribosomal subunit1.99E-02
34GO:0009535: chloroplast thylakoid membrane2.13E-02
35GO:0005819: spindle2.26E-02
36GO:0016021: integral component of membrane3.07E-02
37GO:0009536: plastid3.25E-02
38GO:0005774: vacuolar membrane4.03E-02
39GO:0005783: endoplasmic reticulum4.28E-02
40GO:0009543: chloroplast thylakoid lumen4.74E-02
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Gene type



Gene DE type