Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G06650

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010394: homogalacturonan metabolic process0.00E+00
2GO:0006642: triglyceride mobilization0.00E+00
3GO:0007155: cell adhesion7.91E-06
4GO:0042371: vitamin K biosynthetic process2.88E-05
5GO:0045488: pectin metabolic process2.88E-05
6GO:0071588: hydrogen peroxide mediated signaling pathway2.88E-05
7GO:0046166: glyceraldehyde-3-phosphate biosynthetic process2.88E-05
8GO:0006094: gluconeogenesis3.28E-05
9GO:0045489: pectin biosynthetic process1.23E-04
10GO:0019563: glycerol catabolic process1.27E-04
11GO:0032504: multicellular organism reproduction1.27E-04
12GO:0010190: cytochrome b6f complex assembly4.06E-04
13GO:0006555: methionine metabolic process4.06E-04
14GO:0010019: chloroplast-nucleus signaling pathway4.86E-04
15GO:0032544: plastid translation7.44E-04
16GO:0006096: glycolytic process7.62E-04
17GO:0006098: pentose-phosphate shunt8.35E-04
18GO:0042761: very long-chain fatty acid biosynthetic process9.29E-04
19GO:0035999: tetrahydrofolate interconversion9.29E-04
20GO:0006535: cysteine biosynthetic process from serine1.03E-03
21GO:0009073: aromatic amino acid family biosynthetic process1.13E-03
22GO:0006415: translational termination1.13E-03
23GO:0019253: reductive pentose-phosphate cycle1.45E-03
24GO:0009969: xyloglucan biosynthetic process1.56E-03
25GO:0010025: wax biosynthetic process1.67E-03
26GO:0006833: water transport1.67E-03
27GO:0019344: cysteine biosynthetic process1.79E-03
28GO:0006730: one-carbon metabolic process2.17E-03
29GO:0009294: DNA mediated transformation2.30E-03
30GO:0040007: growth2.30E-03
31GO:0009658: chloroplast organization2.34E-03
32GO:0019722: calcium-mediated signaling2.43E-03
33GO:0071555: cell wall organization2.49E-03
34GO:0000271: polysaccharide biosynthetic process2.70E-03
35GO:0080022: primary root development2.70E-03
36GO:0034220: ion transmembrane transport2.70E-03
37GO:0042335: cuticle development2.70E-03
38GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.99E-03
39GO:0000302: response to reactive oxygen species3.28E-03
40GO:0071554: cell wall organization or biogenesis3.28E-03
41GO:0010583: response to cyclopentenone3.43E-03
42GO:0007267: cell-cell signaling3.89E-03
43GO:0001666: response to hypoxia4.21E-03
44GO:0010027: thylakoid membrane organization4.21E-03
45GO:0016126: sterol biosynthetic process4.21E-03
46GO:0009407: toxin catabolic process5.40E-03
47GO:0009631: cold acclimation5.58E-03
48GO:0016051: carbohydrate biosynthetic process5.94E-03
49GO:0034599: cellular response to oxidative stress6.13E-03
50GO:0008283: cell proliferation7.08E-03
51GO:0009636: response to toxic substance7.68E-03
52GO:0042744: hydrogen peroxide catabolic process1.43E-02
53GO:0006633: fatty acid biosynthetic process1.54E-02
54GO:0040008: regulation of growth1.59E-02
55GO:0007166: cell surface receptor signaling pathway1.81E-02
56GO:0009617: response to bacterium1.86E-02
57GO:0006810: transport2.24E-02
58GO:0007049: cell cycle2.42E-02
59GO:0046777: protein autophosphorylation2.74E-02
60GO:0006869: lipid transport3.17E-02
61GO:0006468: protein phosphorylation3.30E-02
62GO:0006629: lipid metabolic process3.45E-02
RankGO TermAdjusted P value
1GO:0050613: delta14-sterol reductase activity0.00E+00
2GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
3GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
4GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
5GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity2.88E-05
6GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.88E-05
7GO:0004807: triose-phosphate isomerase activity2.88E-05
8GO:0050017: L-3-cyanoalanine synthase activity7.28E-05
9GO:0008805: carbon-monoxide oxygenase activity7.28E-05
10GO:0016149: translation release factor activity, codon specific1.89E-04
11GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.89E-04
12GO:0016688: L-ascorbate peroxidase activity4.06E-04
13GO:0004332: fructose-bisphosphate aldolase activity4.06E-04
14GO:0004130: cytochrome-c peroxidase activity4.06E-04
15GO:0051753: mannan synthase activity4.86E-04
16GO:0004124: cysteine synthase activity4.86E-04
17GO:0003747: translation release factor activity8.35E-04
18GO:0047372: acylglycerol lipase activity1.13E-03
19GO:0008378: galactosyltransferase activity1.23E-03
20GO:0004565: beta-galactosidase activity1.34E-03
21GO:0008083: growth factor activity1.45E-03
22GO:0019706: protein-cysteine S-palmitoyltransferase activity2.04E-03
23GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.17E-03
24GO:0016413: O-acetyltransferase activity4.05E-03
25GO:0015250: water channel activity4.21E-03
26GO:0008289: lipid binding5.89E-03
27GO:0004364: glutathione transferase activity6.89E-03
28GO:0016740: transferase activity9.16E-03
29GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.00E-02
30GO:0004650: polygalacturonase activity1.05E-02
31GO:0016758: transferase activity, transferring hexosyl groups1.28E-02
32GO:0030170: pyridoxal phosphate binding1.41E-02
33GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.56E-02
34GO:0003824: catalytic activity1.67E-02
35GO:0005215: transporter activity1.69E-02
36GO:0004674: protein serine/threonine kinase activity1.88E-02
37GO:0000287: magnesium ion binding2.21E-02
38GO:0004672: protein kinase activity2.24E-02
39GO:0004871: signal transducer activity3.07E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0000139: Golgi membrane8.27E-05
3GO:0005794: Golgi apparatus1.71E-04
4GO:0016021: integral component of membrane8.27E-04
5GO:0009579: thylakoid1.28E-03
6GO:0030659: cytoplasmic vesicle membrane1.45E-03
7GO:0030176: integral component of endoplasmic reticulum membrane1.56E-03
8GO:0005802: trans-Golgi network1.85E-03
9GO:0005768: endosome2.18E-03
10GO:0048046: apoplast2.73E-03
11GO:0009505: plant-type cell wall1.91E-02
12GO:0046658: anchored component of plasma membrane2.00E-02
13GO:0005576: extracellular region2.73E-02
14GO:0009535: chloroplast thylakoid membrane3.42E-02
15GO:0005887: integral component of plasma membrane4.29E-02
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Gene type



Gene DE type