GO Enrichment Analysis of Co-expressed Genes with
AT3G04790
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045761: regulation of adenylate cyclase activity | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0015822: ornithine transport | 0.00E+00 |
| 4 | GO:0035998: 7,8-dihydroneopterin 3'-triphosphate biosynthetic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0042026: protein refolding | 3.92E-08 |
| 7 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.78E-06 |
| 8 | GO:0006546: glycine catabolic process | 2.78E-06 |
| 9 | GO:0007005: mitochondrion organization | 3.36E-06 |
| 10 | GO:0006458: 'de novo' protein folding | 1.05E-05 |
| 11 | GO:0010480: microsporocyte differentiation | 5.03E-05 |
| 12 | GO:0000066: mitochondrial ornithine transport | 5.03E-05 |
| 13 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 5.03E-05 |
| 14 | GO:0019253: reductive pentose-phosphate cycle | 8.62E-05 |
| 15 | GO:0080183: response to photooxidative stress | 1.23E-04 |
| 16 | GO:0008154: actin polymerization or depolymerization | 1.23E-04 |
| 17 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.23E-04 |
| 18 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.23E-04 |
| 19 | GO:0046482: para-aminobenzoic acid metabolic process | 1.23E-04 |
| 20 | GO:0006096: glycolytic process | 1.23E-04 |
| 21 | GO:0007163: establishment or maintenance of cell polarity | 1.23E-04 |
| 22 | GO:0061077: chaperone-mediated protein folding | 1.54E-04 |
| 23 | GO:0006730: one-carbon metabolic process | 1.70E-04 |
| 24 | GO:0006696: ergosterol biosynthetic process | 2.11E-04 |
| 25 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.09E-04 |
| 26 | GO:0016556: mRNA modification | 3.09E-04 |
| 27 | GO:0006542: glutamine biosynthetic process | 4.15E-04 |
| 28 | GO:0019676: ammonia assimilation cycle | 4.15E-04 |
| 29 | GO:0009765: photosynthesis, light harvesting | 4.15E-04 |
| 30 | GO:0046686: response to cadmium ion | 4.59E-04 |
| 31 | GO:0009658: chloroplast organization | 5.85E-04 |
| 32 | GO:0006555: methionine metabolic process | 6.44E-04 |
| 33 | GO:0070814: hydrogen sulfide biosynthetic process | 6.44E-04 |
| 34 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 6.44E-04 |
| 35 | GO:0010190: cytochrome b6f complex assembly | 6.44E-04 |
| 36 | GO:0046654: tetrahydrofolate biosynthetic process | 7.68E-04 |
| 37 | GO:0010555: response to mannitol | 7.68E-04 |
| 38 | GO:0006839: mitochondrial transport | 8.56E-04 |
| 39 | GO:0048437: floral organ development | 8.97E-04 |
| 40 | GO:0009744: response to sucrose | 9.61E-04 |
| 41 | GO:0000105: histidine biosynthetic process | 1.03E-03 |
| 42 | GO:0048564: photosystem I assembly | 1.03E-03 |
| 43 | GO:0008610: lipid biosynthetic process | 1.03E-03 |
| 44 | GO:0009642: response to light intensity | 1.03E-03 |
| 45 | GO:0006526: arginine biosynthetic process | 1.17E-03 |
| 46 | GO:0048589: developmental growth | 1.32E-03 |
| 47 | GO:0035999: tetrahydrofolate interconversion | 1.47E-03 |
| 48 | GO:0009970: cellular response to sulfate starvation | 1.63E-03 |
| 49 | GO:0000103: sulfate assimilation | 1.63E-03 |
| 50 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.79E-03 |
| 51 | GO:0048229: gametophyte development | 1.79E-03 |
| 52 | GO:0009073: aromatic amino acid family biosynthetic process | 1.79E-03 |
| 53 | GO:0009409: response to cold | 1.84E-03 |
| 54 | GO:0006006: glucose metabolic process | 2.14E-03 |
| 55 | GO:0030036: actin cytoskeleton organization | 2.14E-03 |
| 56 | GO:0010075: regulation of meristem growth | 2.14E-03 |
| 57 | GO:0009735: response to cytokinin | 2.26E-03 |
| 58 | GO:0009934: regulation of meristem structural organization | 2.32E-03 |
| 59 | GO:0000162: tryptophan biosynthetic process | 2.69E-03 |
| 60 | GO:0019344: cysteine biosynthetic process | 2.88E-03 |
| 61 | GO:0007010: cytoskeleton organization | 2.88E-03 |
| 62 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.08E-03 |
| 63 | GO:0080092: regulation of pollen tube growth | 3.50E-03 |
| 64 | GO:0006457: protein folding | 3.51E-03 |
| 65 | GO:0016117: carotenoid biosynthetic process | 4.15E-03 |
| 66 | GO:0000413: protein peptidyl-prolyl isomerization | 4.37E-03 |
| 67 | GO:0048653: anther development | 4.37E-03 |
| 68 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.06E-03 |
| 69 | GO:0010286: heat acclimation | 6.33E-03 |
| 70 | GO:0015979: photosynthesis | 6.68E-03 |
| 71 | GO:0010027: thylakoid membrane organization | 6.85E-03 |
| 72 | GO:0009627: systemic acquired resistance | 7.40E-03 |
| 73 | GO:0018298: protein-chromophore linkage | 8.24E-03 |
| 74 | GO:0008219: cell death | 8.24E-03 |
| 75 | GO:0048767: root hair elongation | 8.53E-03 |
| 76 | GO:0010218: response to far red light | 8.82E-03 |
| 77 | GO:0007568: aging | 9.12E-03 |
| 78 | GO:0008152: metabolic process | 9.53E-03 |
| 79 | GO:0009637: response to blue light | 9.73E-03 |
| 80 | GO:0009853: photorespiration | 9.73E-03 |
| 81 | GO:0010114: response to red light | 1.16E-02 |
| 82 | GO:0042538: hyperosmotic salinity response | 1.37E-02 |
| 83 | GO:0009416: response to light stimulus | 1.54E-02 |
| 84 | GO:0009058: biosynthetic process | 2.24E-02 |
| 85 | GO:0009790: embryo development | 2.41E-02 |
| 86 | GO:0009826: unidimensional cell growth | 3.61E-02 |
| 87 | GO:0042254: ribosome biogenesis | 3.76E-02 |
| 88 | GO:0006810: transport | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 2 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 3 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 4 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 5 | GO:0003934: GTP cyclohydrolase I activity | 0.00E+00 |
| 6 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 7 | GO:0008179: adenylate cyclase binding | 0.00E+00 |
| 8 | GO:0044183: protein binding involved in protein folding | 5.30E-07 |
| 9 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.44E-06 |
| 10 | GO:0051996: squalene synthase activity | 5.03E-05 |
| 11 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 5.03E-05 |
| 12 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.23E-04 |
| 13 | GO:0004618: phosphoglycerate kinase activity | 1.23E-04 |
| 14 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.23E-04 |
| 15 | GO:0004047: aminomethyltransferase activity | 1.23E-04 |
| 16 | GO:0047215: indole-3-acetate beta-glucosyltransferase activity | 1.23E-04 |
| 17 | GO:0080002: UDP-glucose:4-aminobenzoate acylglucosyltransferase activity | 1.23E-04 |
| 18 | GO:0000064: L-ornithine transmembrane transporter activity | 1.23E-04 |
| 19 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.23E-04 |
| 20 | GO:0051082: unfolded protein binding | 1.60E-04 |
| 21 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 2.11E-04 |
| 22 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 3.09E-04 |
| 23 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.09E-04 |
| 24 | GO:0004356: glutamate-ammonia ligase activity | 5.26E-04 |
| 25 | GO:0010294: abscisic acid glucosyltransferase activity | 5.26E-04 |
| 26 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.11E-03 |
| 27 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.79E-03 |
| 28 | GO:0031409: pigment binding | 2.69E-03 |
| 29 | GO:0005528: FK506 binding | 2.88E-03 |
| 30 | GO:0035251: UDP-glucosyltransferase activity | 3.29E-03 |
| 31 | GO:0033612: receptor serine/threonine kinase binding | 3.29E-03 |
| 32 | GO:0008194: UDP-glycosyltransferase activity | 3.43E-03 |
| 33 | GO:0005200: structural constituent of cytoskeleton | 6.33E-03 |
| 34 | GO:0008483: transaminase activity | 6.33E-03 |
| 35 | GO:0016597: amino acid binding | 6.59E-03 |
| 36 | GO:0016168: chlorophyll binding | 7.12E-03 |
| 37 | GO:0003746: translation elongation factor activity | 9.73E-03 |
| 38 | GO:0050661: NADP binding | 1.07E-02 |
| 39 | GO:0043621: protein self-association | 1.23E-02 |
| 40 | GO:0051287: NAD binding | 1.33E-02 |
| 41 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.65E-02 |
| 42 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.73E-02 |
| 43 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.73E-02 |
| 44 | GO:0005524: ATP binding | 1.79E-02 |
| 45 | GO:0003779: actin binding | 1.80E-02 |
| 46 | GO:0016740: transferase activity | 1.88E-02 |
| 47 | GO:0016758: transferase activity, transferring hexosyl groups | 2.12E-02 |
| 48 | GO:0019843: rRNA binding | 2.16E-02 |
| 49 | GO:0016757: transferase activity, transferring glycosyl groups | 2.90E-02 |
| 50 | GO:0016491: oxidoreductase activity | 4.09E-02 |
| 51 | GO:0003729: mRNA binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030864: cortical actin cytoskeleton | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.24E-20 |
| 3 | GO:0009570: chloroplast stroma | 1.47E-14 |
| 4 | GO:0009941: chloroplast envelope | 4.54E-13 |
| 5 | GO:0009579: thylakoid | 4.89E-10 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 6.22E-10 |
| 7 | GO:0010319: stromule | 2.45E-07 |
| 8 | GO:0005960: glycine cleavage complex | 1.44E-06 |
| 9 | GO:0022626: cytosolic ribosome | 2.75E-06 |
| 10 | GO:0048046: apoplast | 9.20E-05 |
| 11 | GO:0045254: pyruvate dehydrogenase complex | 1.23E-04 |
| 12 | GO:0031977: thylakoid lumen | 8.91E-04 |
| 13 | GO:0005739: mitochondrion | 9.82E-04 |
| 14 | GO:0005856: cytoskeleton | 1.07E-03 |
| 15 | GO:0009539: photosystem II reaction center | 1.17E-03 |
| 16 | GO:0048471: perinuclear region of cytoplasm | 1.79E-03 |
| 17 | GO:0010287: plastoglobule | 2.12E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 2.24E-03 |
| 19 | GO:0030076: light-harvesting complex | 2.50E-03 |
| 20 | GO:0005759: mitochondrial matrix | 2.80E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 3.08E-03 |
| 22 | GO:0009522: photosystem I | 4.83E-03 |
| 23 | GO:0009523: photosystem II | 5.07E-03 |
| 24 | GO:0031969: chloroplast membrane | 5.85E-03 |
| 25 | GO:0005743: mitochondrial inner membrane | 8.03E-03 |
| 26 | GO:0009534: chloroplast thylakoid | 1.86E-02 |
| 27 | GO:0005829: cytosol | 1.87E-02 |
| 28 | GO:0009524: phragmoplast | 2.24E-02 |
| 29 | GO:0005840: ribosome | 3.27E-02 |
| 30 | GO:0016020: membrane | 3.62E-02 |
| 31 | GO:0009536: plastid | 3.82E-02 |