Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G04060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010360: negative regulation of anion channel activity0.00E+00
2GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
3GO:0010365: positive regulation of ethylene biosynthetic process2.41E-05
4GO:0015760: glucose-6-phosphate transport2.41E-05
5GO:1902361: mitochondrial pyruvate transmembrane transport2.41E-05
6GO:0006850: mitochondrial pyruvate transport6.16E-05
7GO:0019441: tryptophan catabolic process to kynurenine6.16E-05
8GO:0006672: ceramide metabolic process6.16E-05
9GO:0015712: hexose phosphate transport6.16E-05
10GO:0051258: protein polymerization6.16E-05
11GO:0015714: phosphoenolpyruvate transport1.09E-04
12GO:0010359: regulation of anion channel activity1.09E-04
13GO:0010288: response to lead ion1.09E-04
14GO:0035436: triose phosphate transmembrane transport1.09E-04
15GO:0010476: gibberellin mediated signaling pathway1.09E-04
16GO:0010325: raffinose family oligosaccharide biosynthetic process1.09E-04
17GO:0009413: response to flooding1.62E-04
18GO:0010109: regulation of photosynthesis2.21E-04
19GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.21E-04
20GO:0015713: phosphoglycerate transport2.21E-04
21GO:1902456: regulation of stomatal opening3.51E-04
22GO:0009643: photosynthetic acclimation3.51E-04
23GO:0048444: floral organ morphogenesis4.20E-04
24GO:2000070: regulation of response to water deprivation5.68E-04
25GO:0009056: catabolic process7.25E-04
26GO:0043069: negative regulation of programmed cell death8.92E-04
27GO:0006378: mRNA polyadenylation9.78E-04
28GO:0035428: hexose transmembrane transport1.87E-03
29GO:0006817: phosphate ion transport2.10E-03
30GO:0046323: glucose import2.45E-03
31GO:0009749: response to glucose2.70E-03
32GO:0006914: autophagy3.22E-03
33GO:0001666: response to hypoxia3.63E-03
34GO:0010119: regulation of stomatal movement4.80E-03
35GO:0009744: response to sucrose6.08E-03
36GO:0009624: response to nematode9.56E-03
37GO:0018105: peptidyl-serine phosphorylation9.75E-03
38GO:0009739: response to gibberellin1.52E-02
39GO:0080167: response to karrikin2.23E-02
40GO:0010200: response to chitin2.29E-02
41GO:0046777: protein autophosphorylation2.34E-02
42GO:0015979: photosynthesis2.45E-02
43GO:0006869: lipid transport2.71E-02
44GO:0016042: lipid catabolic process2.89E-02
45GO:0006629: lipid metabolic process2.95E-02
46GO:0008152: metabolic process3.16E-02
47GO:0009738: abscisic acid-activated signaling pathway4.33E-02
48GO:0035556: intracellular signal transduction4.61E-02
RankGO TermAdjusted P value
1GO:0004061: arylformamidase activity6.16E-05
2GO:0032791: lead ion binding6.16E-05
3GO:0010331: gibberellin binding6.16E-05
4GO:0015152: glucose-6-phosphate transmembrane transporter activity6.16E-05
5GO:0071917: triose-phosphate transmembrane transporter activity1.09E-04
6GO:0050833: pyruvate transmembrane transporter activity1.09E-04
7GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.62E-04
8GO:0000062: fatty-acyl-CoA binding2.21E-04
9GO:0015120: phosphoglycerate transmembrane transporter activity2.21E-04
10GO:0004012: phospholipid-translocating ATPase activity4.20E-04
11GO:0071949: FAD binding7.25E-04
12GO:0005315: inorganic phosphate transmembrane transporter activity1.16E-03
13GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.16E-03
14GO:0008134: transcription factor binding1.55E-03
15GO:0043130: ubiquitin binding1.55E-03
16GO:0005355: glucose transmembrane transporter activity2.57E-03
17GO:0008483: transaminase activity3.35E-03
18GO:0016597: amino acid binding3.49E-03
19GO:0051213: dioxygenase activity3.63E-03
20GO:0009931: calcium-dependent protein serine/threonine kinase activity3.90E-03
21GO:0004683: calmodulin-dependent protein kinase activity4.05E-03
22GO:0004806: triglyceride lipase activity4.05E-03
23GO:0016787: hydrolase activity4.90E-03
24GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors5.11E-03
25GO:0005516: calmodulin binding9.05E-03
26GO:0015144: carbohydrate transmembrane transporter activity1.27E-02
27GO:0015297: antiporter activity1.36E-02
28GO:0005351: sugar:proton symporter activity1.38E-02
29GO:0043565: sequence-specific DNA binding1.48E-02
30GO:0000287: magnesium ion binding1.89E-02
31GO:0050660: flavin adenine dinucleotide binding2.12E-02
32GO:0004497: monooxygenase activity2.23E-02
33GO:0009055: electron carrier activity3.10E-02
34GO:0008289: lipid binding3.73E-02
RankGO TermAdjusted P value
1GO:0005849: mRNA cleavage factor complex1.62E-04
2GO:0031305: integral component of mitochondrial inner membrane5.68E-04
3GO:0009514: glyoxysome6.45E-04
4GO:0005778: peroxisomal membrane3.35E-03
5GO:0031902: late endosome membrane5.75E-03
6GO:0005802: trans-Golgi network9.64E-03
7GO:0005768: endosome1.10E-02
8GO:0005789: endoplasmic reticulum membrane1.87E-02
9GO:0005783: endoplasmic reticulum2.19E-02
10GO:0031969: chloroplast membrane2.23E-02
11GO:0005634: nucleus3.00E-02
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Gene type



Gene DE type