GO Enrichment Analysis of Co-expressed Genes with
AT3G03220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0010394: homogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 4 | GO:0006633: fatty acid biosynthetic process | 2.92E-08 |
| 5 | GO:0009657: plastid organization | 6.13E-06 |
| 6 | GO:0045488: pectin metabolic process | 2.08E-05 |
| 7 | GO:0006729: tetrahydrobiopterin biosynthetic process | 5.37E-05 |
| 8 | GO:0006695: cholesterol biosynthetic process | 5.37E-05 |
| 9 | GO:0010581: regulation of starch biosynthetic process | 9.50E-05 |
| 10 | GO:0006241: CTP biosynthetic process | 1.42E-04 |
| 11 | GO:0006165: nucleoside diphosphate phosphorylation | 1.42E-04 |
| 12 | GO:0006228: UTP biosynthetic process | 1.42E-04 |
| 13 | GO:0006183: GTP biosynthetic process | 1.95E-04 |
| 14 | GO:0044206: UMP salvage | 1.95E-04 |
| 15 | GO:0043097: pyrimidine nucleoside salvage | 2.51E-04 |
| 16 | GO:0006014: D-ribose metabolic process | 3.11E-04 |
| 17 | GO:0006206: pyrimidine nucleobase metabolic process | 3.11E-04 |
| 18 | GO:0030488: tRNA methylation | 3.73E-04 |
| 19 | GO:0006875: cellular metal ion homeostasis | 5.05E-04 |
| 20 | GO:0006096: glycolytic process | 5.18E-04 |
| 21 | GO:0019430: removal of superoxide radicals | 5.74E-04 |
| 22 | GO:0006526: arginine biosynthetic process | 5.74E-04 |
| 23 | GO:0033384: geranyl diphosphate biosynthetic process | 6.45E-04 |
| 24 | GO:0045337: farnesyl diphosphate biosynthetic process | 6.45E-04 |
| 25 | GO:0010380: regulation of chlorophyll biosynthetic process | 7.18E-04 |
| 26 | GO:0045036: protein targeting to chloroplast | 7.94E-04 |
| 27 | GO:0043085: positive regulation of catalytic activity | 8.71E-04 |
| 28 | GO:0045037: protein import into chloroplast stroma | 9.50E-04 |
| 29 | GO:0010020: chloroplast fission | 1.11E-03 |
| 30 | GO:0009116: nucleoside metabolic process | 1.38E-03 |
| 31 | GO:0008299: isoprenoid biosynthetic process | 1.47E-03 |
| 32 | GO:0009411: response to UV | 1.76E-03 |
| 33 | GO:0040007: growth | 1.76E-03 |
| 34 | GO:0006520: cellular amino acid metabolic process | 2.17E-03 |
| 35 | GO:0045489: pectin biosynthetic process | 2.17E-03 |
| 36 | GO:0019252: starch biosynthetic process | 2.39E-03 |
| 37 | GO:0032502: developmental process | 2.61E-03 |
| 38 | GO:0009817: defense response to fungus, incompatible interaction | 3.84E-03 |
| 39 | GO:0016051: carbohydrate biosynthetic process | 4.51E-03 |
| 40 | GO:0042542: response to hydrogen peroxide | 5.22E-03 |
| 41 | GO:0009585: red, far-red light phototransduction | 6.59E-03 |
| 42 | GO:0006396: RNA processing | 8.59E-03 |
| 43 | GO:0042744: hydrogen peroxide catabolic process | 1.08E-02 |
| 44 | GO:0016036: cellular response to phosphate starvation | 1.18E-02 |
| 45 | GO:0046686: response to cadmium ion | 1.59E-02 |
| 46 | GO:0009658: chloroplast organization | 1.68E-02 |
| 47 | GO:0042254: ribosome biogenesis | 1.71E-02 |
| 48 | GO:0045454: cell redox homeostasis | 2.23E-02 |
| 49 | GO:0009734: auxin-activated signaling pathway | 3.31E-02 |
| 50 | GO:0055114: oxidation-reduction process | 3.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 2 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 3 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 4 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 5 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.35E-08 |
| 6 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.21E-07 |
| 7 | GO:0015088: copper uptake transmembrane transporter activity | 2.08E-05 |
| 8 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.08E-05 |
| 9 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.08E-05 |
| 10 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 9.50E-05 |
| 11 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 9.50E-05 |
| 12 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.50E-05 |
| 13 | GO:0004550: nucleoside diphosphate kinase activity | 1.42E-04 |
| 14 | GO:0004845: uracil phosphoribosyltransferase activity | 1.95E-04 |
| 15 | GO:0016836: hydro-lyase activity | 1.95E-04 |
| 16 | GO:0005198: structural molecule activity | 3.67E-04 |
| 17 | GO:0004849: uridine kinase activity | 3.73E-04 |
| 18 | GO:0004747: ribokinase activity | 3.73E-04 |
| 19 | GO:0008865: fructokinase activity | 5.05E-04 |
| 20 | GO:0008173: RNA methyltransferase activity | 5.74E-04 |
| 21 | GO:0004337: geranyltranstransferase activity | 6.45E-04 |
| 22 | GO:0005381: iron ion transmembrane transporter activity | 7.18E-04 |
| 23 | GO:0008047: enzyme activator activity | 7.94E-04 |
| 24 | GO:0004161: dimethylallyltranstransferase activity | 8.71E-04 |
| 25 | GO:0005525: GTP binding | 1.15E-03 |
| 26 | GO:0042802: identical protein binding | 1.30E-03 |
| 27 | GO:0004791: thioredoxin-disulfide reductase activity | 2.28E-03 |
| 28 | GO:0042803: protein homodimerization activity | 2.43E-03 |
| 29 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.73E-03 |
| 30 | GO:0003924: GTPase activity | 2.85E-03 |
| 31 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.84E-03 |
| 32 | GO:0003723: RNA binding | 4.64E-03 |
| 33 | GO:0051287: NAD binding | 6.12E-03 |
| 34 | GO:0005507: copper ion binding | 7.13E-03 |
| 35 | GO:0004650: polygalacturonase activity | 7.90E-03 |
| 36 | GO:0019843: rRNA binding | 9.85E-03 |
| 37 | GO:0016491: oxidoreductase activity | 1.34E-02 |
| 38 | GO:0003729: mRNA binding | 1.51E-02 |
| 39 | GO:0009055: electron carrier activity | 2.72E-02 |
| 40 | GO:0016887: ATPase activity | 3.54E-02 |
| 41 | GO:0016740: transferase activity | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.78E-13 |
| 3 | GO:0009570: chloroplast stroma | 1.08E-11 |
| 4 | GO:0009941: chloroplast envelope | 4.02E-07 |
| 5 | GO:0045254: pyruvate dehydrogenase complex | 5.37E-05 |
| 6 | GO:0031897: Tic complex | 1.95E-04 |
| 7 | GO:0045298: tubulin complex | 6.45E-04 |
| 8 | GO:0009534: chloroplast thylakoid | 7.87E-04 |
| 9 | GO:0042651: thylakoid membrane | 1.47E-03 |
| 10 | GO:0015935: small ribosomal subunit | 1.56E-03 |
| 11 | GO:0009532: plastid stroma | 1.56E-03 |
| 12 | GO:0005618: cell wall | 1.66E-03 |
| 13 | GO:0009707: chloroplast outer membrane | 3.84E-03 |
| 14 | GO:0009579: thylakoid | 5.99E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 8.42E-03 |
| 16 | GO:0005623: cell | 1.00E-02 |
| 17 | GO:0005840: ribosome | 1.06E-02 |
| 18 | GO:0005759: mitochondrial matrix | 1.16E-02 |
| 19 | GO:0005730: nucleolus | 1.72E-02 |
| 20 | GO:0005874: microtubule | 1.91E-02 |
| 21 | GO:0022626: cytosolic ribosome | 3.78E-02 |