GO Enrichment Analysis of Co-expressed Genes with
AT3G02910
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035725: sodium ion transmembrane transport | 0.00E+00 |
| 2 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 3 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.86E-07 |
| 4 | GO:0071482: cellular response to light stimulus | 5.54E-05 |
| 5 | GO:0010028: xanthophyll cycle | 8.43E-05 |
| 6 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 8.43E-05 |
| 7 | GO:0019684: photosynthesis, light reaction | 1.18E-04 |
| 8 | GO:0006352: DNA-templated transcription, initiation | 1.18E-04 |
| 9 | GO:0009767: photosynthetic electron transport chain | 1.58E-04 |
| 10 | GO:0019253: reductive pentose-phosphate cycle | 1.80E-04 |
| 11 | GO:0080183: response to photooxidative stress | 2.00E-04 |
| 12 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.00E-04 |
| 13 | GO:0010351: lithium ion transport | 3.35E-04 |
| 14 | GO:0045910: negative regulation of DNA recombination | 3.35E-04 |
| 15 | GO:0006000: fructose metabolic process | 3.35E-04 |
| 16 | GO:0080092: regulation of pollen tube growth | 3.42E-04 |
| 17 | GO:2001141: regulation of RNA biosynthetic process | 4.84E-04 |
| 18 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.84E-04 |
| 19 | GO:0010239: chloroplast mRNA processing | 4.84E-04 |
| 20 | GO:0016556: mRNA modification | 4.84E-04 |
| 21 | GO:0033014: tetrapyrrole biosynthetic process | 4.84E-04 |
| 22 | GO:0006814: sodium ion transport | 5.47E-04 |
| 23 | GO:0015743: malate transport | 6.44E-04 |
| 24 | GO:0019464: glycine decarboxylation via glycine cleavage system | 6.44E-04 |
| 25 | GO:0071483: cellular response to blue light | 6.44E-04 |
| 26 | GO:0009902: chloroplast relocation | 6.44E-04 |
| 27 | GO:0009107: lipoate biosynthetic process | 8.14E-04 |
| 28 | GO:1902183: regulation of shoot apical meristem development | 8.14E-04 |
| 29 | GO:0098719: sodium ion import across plasma membrane | 8.14E-04 |
| 30 | GO:0010236: plastoquinone biosynthetic process | 8.14E-04 |
| 31 | GO:0042026: protein refolding | 1.18E-03 |
| 32 | GO:0006458: 'de novo' protein folding | 1.18E-03 |
| 33 | GO:0006826: iron ion transport | 1.39E-03 |
| 34 | GO:0006810: transport | 1.39E-03 |
| 35 | GO:0055075: potassium ion homeostasis | 1.60E-03 |
| 36 | GO:0016559: peroxisome fission | 1.60E-03 |
| 37 | GO:0048564: photosystem I assembly | 1.60E-03 |
| 38 | GO:0008610: lipid biosynthetic process | 1.60E-03 |
| 39 | GO:0006002: fructose 6-phosphate metabolic process | 1.83E-03 |
| 40 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.83E-03 |
| 41 | GO:0009657: plastid organization | 1.83E-03 |
| 42 | GO:0006526: arginine biosynthetic process | 1.83E-03 |
| 43 | GO:0009744: response to sucrose | 1.84E-03 |
| 44 | GO:0000902: cell morphogenesis | 2.06E-03 |
| 45 | GO:0098656: anion transmembrane transport | 2.06E-03 |
| 46 | GO:2000024: regulation of leaf development | 2.06E-03 |
| 47 | GO:0090333: regulation of stomatal closure | 2.06E-03 |
| 48 | GO:0006783: heme biosynthetic process | 2.06E-03 |
| 49 | GO:0051453: regulation of intracellular pH | 2.30E-03 |
| 50 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.30E-03 |
| 51 | GO:0006298: mismatch repair | 2.56E-03 |
| 52 | GO:0051555: flavonol biosynthetic process | 2.56E-03 |
| 53 | GO:0006535: cysteine biosynthetic process from serine | 2.56E-03 |
| 54 | GO:0006415: translational termination | 2.82E-03 |
| 55 | GO:0008152: metabolic process | 3.29E-03 |
| 56 | GO:0006094: gluconeogenesis | 3.37E-03 |
| 57 | GO:0005986: sucrose biosynthetic process | 3.37E-03 |
| 58 | GO:0006006: glucose metabolic process | 3.37E-03 |
| 59 | GO:0090351: seedling development | 3.95E-03 |
| 60 | GO:0007031: peroxisome organization | 3.95E-03 |
| 61 | GO:0042343: indole glucosinolate metabolic process | 3.95E-03 |
| 62 | GO:0010039: response to iron ion | 3.95E-03 |
| 63 | GO:0019344: cysteine biosynthetic process | 4.57E-03 |
| 64 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.57E-03 |
| 65 | GO:0006289: nucleotide-excision repair | 4.57E-03 |
| 66 | GO:0098542: defense response to other organism | 5.22E-03 |
| 67 | GO:0061077: chaperone-mediated protein folding | 5.22E-03 |
| 68 | GO:0006730: one-carbon metabolic process | 5.55E-03 |
| 69 | GO:0009416: response to light stimulus | 6.01E-03 |
| 70 | GO:0046686: response to cadmium ion | 6.45E-03 |
| 71 | GO:0008360: regulation of cell shape | 7.34E-03 |
| 72 | GO:0019252: starch biosynthetic process | 8.10E-03 |
| 73 | GO:0009658: chloroplast organization | 9.31E-03 |
| 74 | GO:0010286: heat acclimation | 1.01E-02 |
| 75 | GO:0071805: potassium ion transmembrane transport | 1.01E-02 |
| 76 | GO:0080167: response to karrikin | 1.16E-02 |
| 77 | GO:0046777: protein autophosphorylation | 1.24E-02 |
| 78 | GO:0009817: defense response to fungus, incompatible interaction | 1.33E-02 |
| 79 | GO:0009407: toxin catabolic process | 1.42E-02 |
| 80 | GO:0009853: photorespiration | 1.57E-02 |
| 81 | GO:0016051: carbohydrate biosynthetic process | 1.57E-02 |
| 82 | GO:0032259: methylation | 1.64E-02 |
| 83 | GO:0006629: lipid metabolic process | 1.71E-02 |
| 84 | GO:0006839: mitochondrial transport | 1.72E-02 |
| 85 | GO:0006631: fatty acid metabolic process | 1.77E-02 |
| 86 | GO:0009636: response to toxic substance | 2.04E-02 |
| 87 | GO:0042538: hyperosmotic salinity response | 2.21E-02 |
| 88 | GO:0006096: glycolytic process | 2.62E-02 |
| 89 | GO:0006396: RNA processing | 3.05E-02 |
| 90 | GO:0018105: peptidyl-serine phosphorylation | 3.05E-02 |
| 91 | GO:0007623: circadian rhythm | 4.40E-02 |
| 92 | GO:0009451: RNA modification | 4.47E-02 |
| 93 | GO:0009739: response to gibberellin | 4.77E-02 |
| 94 | GO:0008380: RNA splicing | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 2 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 3 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 6 | GO:0001053: plastid sigma factor activity | 6.70E-06 |
| 7 | GO:0016987: sigma factor activity | 6.70E-06 |
| 8 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.44E-05 |
| 9 | GO:0004325: ferrochelatase activity | 8.43E-05 |
| 10 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 8.43E-05 |
| 11 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.18E-04 |
| 12 | GO:0050017: L-3-cyanoalanine synthase activity | 2.00E-04 |
| 13 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.00E-04 |
| 14 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.00E-04 |
| 15 | GO:0030385: ferredoxin:thioredoxin reductase activity | 2.00E-04 |
| 16 | GO:0015367: oxoglutarate:malate antiporter activity | 2.00E-04 |
| 17 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.00E-04 |
| 18 | GO:0070330: aromatase activity | 3.35E-04 |
| 19 | GO:0016992: lipoate synthase activity | 3.35E-04 |
| 20 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.35E-04 |
| 21 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 4.84E-04 |
| 22 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.84E-04 |
| 23 | GO:0016149: translation release factor activity, codon specific | 4.84E-04 |
| 24 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.44E-04 |
| 25 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 6.44E-04 |
| 26 | GO:0008374: O-acyltransferase activity | 8.14E-04 |
| 27 | GO:0018685: alkane 1-monooxygenase activity | 8.14E-04 |
| 28 | GO:0008194: UDP-glycosyltransferase activity | 9.09E-04 |
| 29 | GO:0015081: sodium ion transmembrane transporter activity | 9.94E-04 |
| 30 | GO:0030983: mismatched DNA binding | 9.94E-04 |
| 31 | GO:0080030: methyl indole-3-acetate esterase activity | 9.94E-04 |
| 32 | GO:0042578: phosphoric ester hydrolase activity | 9.94E-04 |
| 33 | GO:0004124: cysteine synthase activity | 1.18E-03 |
| 34 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.18E-03 |
| 35 | GO:0043295: glutathione binding | 1.39E-03 |
| 36 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.83E-03 |
| 37 | GO:0003747: translation release factor activity | 2.06E-03 |
| 38 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.47E-03 |
| 39 | GO:0044183: protein binding involved in protein folding | 2.82E-03 |
| 40 | GO:0015386: potassium:proton antiporter activity | 2.82E-03 |
| 41 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.20E-03 |
| 42 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.20E-03 |
| 43 | GO:0004519: endonuclease activity | 3.23E-03 |
| 44 | GO:0022857: transmembrane transporter activity | 3.29E-03 |
| 45 | GO:0031072: heat shock protein binding | 3.37E-03 |
| 46 | GO:0008081: phosphoric diester hydrolase activity | 3.37E-03 |
| 47 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.37E-03 |
| 48 | GO:0051082: unfolded protein binding | 3.50E-03 |
| 49 | GO:0005528: FK506 binding | 4.57E-03 |
| 50 | GO:0008514: organic anion transmembrane transporter activity | 6.24E-03 |
| 51 | GO:0003756: protein disulfide isomerase activity | 6.24E-03 |
| 52 | GO:0048038: quinone binding | 8.50E-03 |
| 53 | GO:0004518: nuclease activity | 8.90E-03 |
| 54 | GO:0008168: methyltransferase activity | 8.96E-03 |
| 55 | GO:0015385: sodium:proton antiporter activity | 9.30E-03 |
| 56 | GO:0003684: damaged DNA binding | 9.72E-03 |
| 57 | GO:0016787: hydrolase activity | 1.04E-02 |
| 58 | GO:0016597: amino acid binding | 1.06E-02 |
| 59 | GO:0050660: flavin adenine dinucleotide binding | 1.08E-02 |
| 60 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.19E-02 |
| 61 | GO:0004683: calmodulin-dependent protein kinase activity | 1.23E-02 |
| 62 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.28E-02 |
| 63 | GO:0005509: calcium ion binding | 1.33E-02 |
| 64 | GO:0004222: metalloendopeptidase activity | 1.42E-02 |
| 65 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.47E-02 |
| 66 | GO:0050897: cobalt ion binding | 1.47E-02 |
| 67 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.62E-02 |
| 68 | GO:0050661: NADP binding | 1.72E-02 |
| 69 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.72E-02 |
| 70 | GO:0004364: glutathione transferase activity | 1.83E-02 |
| 71 | GO:0005198: structural molecule activity | 2.04E-02 |
| 72 | GO:0016757: transferase activity, transferring glycosyl groups | 2.09E-02 |
| 73 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.10E-02 |
| 74 | GO:0051287: NAD binding | 2.15E-02 |
| 75 | GO:0016758: transferase activity, transferring hexosyl groups | 3.44E-02 |
| 76 | GO:0019843: rRNA binding | 3.50E-02 |
| 77 | GO:0030170: pyridoxal phosphate binding | 3.77E-02 |
| 78 | GO:0019825: oxygen binding | 4.31E-02 |
| 79 | GO:0005516: calmodulin binding | 4.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.59E-19 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.11E-07 |
| 4 | GO:0009706: chloroplast inner membrane | 2.95E-05 |
| 5 | GO:0009570: chloroplast stroma | 3.04E-05 |
| 6 | GO:0009941: chloroplast envelope | 5.04E-05 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.88E-05 |
| 8 | GO:0030095: chloroplast photosystem II | 1.80E-04 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 2.83E-04 |
| 10 | GO:0005960: glycine cleavage complex | 4.84E-04 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 5.30E-04 |
| 12 | GO:0043231: intracellular membrane-bounded organelle | 5.54E-04 |
| 13 | GO:0019898: extrinsic component of membrane | 5.85E-04 |
| 14 | GO:0010319: stromule | 7.98E-04 |
| 15 | GO:0055035: plastid thylakoid membrane | 8.14E-04 |
| 16 | GO:0009536: plastid | 1.01E-03 |
| 17 | GO:0009840: chloroplastic endopeptidase Clp complex | 1.18E-03 |
| 18 | GO:0031969: chloroplast membrane | 1.78E-03 |
| 19 | GO:0005779: integral component of peroxisomal membrane | 1.83E-03 |
| 20 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.83E-03 |
| 21 | GO:0016324: apical plasma membrane | 2.56E-03 |
| 22 | GO:0009508: plastid chromosome | 3.37E-03 |
| 23 | GO:0009579: thylakoid | 7.53E-03 |
| 24 | GO:0009534: chloroplast thylakoid | 7.63E-03 |
| 25 | GO:0005778: peroxisomal membrane | 1.01E-02 |
| 26 | GO:0009295: nucleoid | 1.01E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 1.33E-02 |
| 28 | GO:0000325: plant-type vacuole | 1.47E-02 |
| 29 | GO:0005747: mitochondrial respiratory chain complex I | 2.68E-02 |
| 30 | GO:0010287: plastoglobule | 3.37E-02 |
| 31 | GO:0005623: cell | 3.57E-02 |
| 32 | GO:0005759: mitochondrial matrix | 4.12E-02 |