co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G02710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0039694: viral RNA genome replication	0.00E+00
2	GO:0031564: transcription antitermination	0.00E+00
3	GO:0048227: plasma membrane to endosome transport	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
6	GO:0009414: response to water deprivation	1.12E-05
7	GO:0000302: response to reactive oxygen species	7.14E-05
8	GO:0002143: tRNA wobble position uridine thiolation	1.27E-04
9	GO:0009968: negative regulation of signal transduction	1.27E-04
10	GO:0010266: response to vitamin B1	1.27E-04
11	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.27E-04
12	GO:0034975: protein folding in endoplasmic reticulum	1.27E-04
13	GO:0043547: positive regulation of GTPase activity	1.27E-04
14	GO:0006422: aspartyl-tRNA aminoacylation	1.27E-04
15	GO:0009627: systemic acquired resistance	1.45E-04
16	GO:0015031: protein transport	1.65E-04
17	GO:0031349: positive regulation of defense response	2.94E-04
18	GO:0002221: pattern recognition receptor signaling pathway	2.94E-04
19	GO:0015914: phospholipid transport	2.94E-04
20	GO:0006468: protein phosphorylation	3.81E-04
21	GO:0042742: defense response to bacterium	4.56E-04
22	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	4.86E-04
23	GO:0010272: response to silver ion	4.86E-04
24	GO:0010227: floral organ abscission	6.40E-04
25	GO:0001676: long-chain fatty acid metabolic process	6.95E-04
26	GO:0000187: activation of MAPK activity	6.95E-04
27	GO:2000038: regulation of stomatal complex development	9.21E-04
28	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	9.21E-04
29	GO:0080142: regulation of salicylic acid biosynthetic process	9.21E-04
30	GO:0060548: negative regulation of cell death	9.21E-04
31	GO:0006623: protein targeting to vacuole	9.96E-04
32	GO:0018279: protein N-linked glycosylation via asparagine	1.16E-03
33	GO:0031365: N-terminal protein amino acid modification	1.16E-03
34	GO:0045116: protein neddylation	1.16E-03
35	GO:0045040: protein import into mitochondrial outer membrane	1.43E-03
36	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	1.43E-03
37	GO:0010150: leaf senescence	1.58E-03
38	GO:0000911: cytokinesis by cell plate formation	1.71E-03
39	GO:0009612: response to mechanical stimulus	1.71E-03
40	GO:0006694: steroid biosynthetic process	1.71E-03
41	GO:2000037: regulation of stomatal complex patterning	1.71E-03
42	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.71E-03
43	GO:0043090: amino acid import	2.01E-03
44	GO:0006499: N-terminal protein myristoylation	2.17E-03
45	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.32E-03
46	GO:0009819: drought recovery	2.32E-03
47	GO:0046685: response to arsenic-containing substance	3.00E-03
48	GO:0009409: response to cold	3.25E-03
49	GO:0080167: response to karrikin	3.61E-03
50	GO:0000103: sulfate assimilation	3.73E-03
51	GO:0006032: chitin catabolic process	3.73E-03
52	GO:0000272: polysaccharide catabolic process	4.12E-03
53	GO:0030148: sphingolipid biosynthetic process	4.12E-03
54	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.52E-03
55	GO:0006952: defense response	4.54E-03
56	GO:0006886: intracellular protein transport	4.71E-03
57	GO:0010102: lateral root morphogenesis	4.93E-03
58	GO:0006626: protein targeting to mitochondrion	4.93E-03
59	GO:0010229: inflorescence development	4.93E-03
60	GO:0009626: plant-type hypersensitive response	5.39E-03
61	GO:0042343: indole glucosinolate metabolic process	5.80E-03
62	GO:0070588: calcium ion transmembrane transport	5.80E-03
63	GO:0000027: ribosomal large subunit assembly	6.71E-03
64	GO:2000377: regulation of reactive oxygen species metabolic process	6.71E-03
65	GO:0006487: protein N-linked glycosylation	6.71E-03
66	GO:0016575: histone deacetylation	7.19E-03
67	GO:0016998: cell wall macromolecule catabolic process	7.68E-03
68	GO:0098542: defense response to other organism	7.68E-03
69	GO:0009814: defense response, incompatible interaction	8.18E-03
70	GO:0007131: reciprocal meiotic recombination	8.18E-03
71	GO:0031348: negative regulation of defense response	8.18E-03
72	GO:0009625: response to insect	8.69E-03
73	GO:0042127: regulation of cell proliferation	9.21E-03
74	GO:0009306: protein secretion	9.21E-03
75	GO:0042147: retrograde transport, endosome to Golgi	9.75E-03
76	GO:0042391: regulation of membrane potential	1.03E-02
77	GO:0010501: RNA secondary structure unwinding	1.03E-02
78	GO:0042631: cellular response to water deprivation	1.03E-02
79	GO:0006662: glycerol ether metabolic process	1.09E-02
80	GO:0010197: polar nucleus fusion	1.09E-02
81	GO:0010182: sugar mediated signaling pathway	1.09E-02
82	GO:0061025: membrane fusion	1.14E-02
83	GO:0009646: response to absence of light	1.14E-02
84	GO:0009749: response to glucose	1.20E-02
85	GO:0007166: cell surface receptor signaling pathway	1.20E-02
86	GO:0010193: response to ozone	1.26E-02
87	GO:0009617: response to bacterium	1.26E-02
88	GO:0007264: small GTPase mediated signal transduction	1.32E-02
89	GO:0030163: protein catabolic process	1.38E-02
90	GO:0010252: auxin homeostasis	1.44E-02
91	GO:0006464: cellular protein modification process	1.44E-02
92	GO:0009651: response to salt stress	1.57E-02
93	GO:0009615: response to virus	1.63E-02
94	GO:0009607: response to biotic stimulus	1.70E-02
95	GO:0008219: cell death	1.97E-02
96	GO:0010200: response to chitin	2.10E-02
97	GO:0009407: toxin catabolic process	2.11E-02
98	GO:0016192: vesicle-mediated transport	2.13E-02
99	GO:0046777: protein autophosphorylation	2.17E-02
100	GO:0009631: cold acclimation	2.19E-02
101	GO:0010119: regulation of stomatal movement	2.19E-02
102	GO:0044550: secondary metabolite biosynthetic process	2.21E-02
103	GO:0006865: amino acid transport	2.26E-02
104	GO:0034599: cellular response to oxidative stress	2.41E-02
105	GO:0009737: response to abscisic acid	2.41E-02
106	GO:0045454: cell redox homeostasis	2.43E-02
107	GO:0006839: mitochondrial transport	2.56E-02
108	GO:0006631: fatty acid metabolic process	2.64E-02
109	GO:0051707: response to other organism	2.80E-02
110	GO:0006979: response to oxidative stress	3.01E-02
111	GO:0009636: response to toxic substance	3.04E-02
112	GO:0009965: leaf morphogenesis	3.04E-02
113	GO:0000165: MAPK cascade	3.20E-02
114	GO:0009664: plant-type cell wall organization	3.29E-02
115	GO:0009809: lignin biosynthetic process	3.46E-02
116	GO:0016569: covalent chromatin modification	4.26E-02
117	GO:0009553: embryo sac development	4.35E-02
118	GO:0009624: response to nematode	4.44E-02
119	GO:0018105: peptidyl-serine phosphorylation	4.53E-02
120	GO:0009735: response to cytokinin	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0050220: prostaglandin-E synthase activity	0.00E+00
2	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
3	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
4	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
5	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
6	GO:0004164: diphthine synthase activity	0.00E+00
7	GO:0008641: small protein activating enzyme activity	2.24E-05
8	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.24E-05
9	GO:2001147: camalexin binding	1.27E-04
10	GO:2001227: quercitrin binding	1.27E-04
11	GO:0015085: calcium ion transmembrane transporter activity	1.27E-04
12	GO:0004815: aspartate-tRNA ligase activity	1.27E-04
13	GO:0038199: ethylene receptor activity	2.94E-04
14	GO:0045140: inositol phosphoceramide synthase activity	2.94E-04
15	GO:0019781: NEDD8 activating enzyme activity	2.94E-04
16	GO:0016301: kinase activity	4.83E-04
17	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	4.86E-04
18	GO:0005093: Rab GDP-dissociation inhibitor activity	4.86E-04
19	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	4.86E-04
20	GO:0000166: nucleotide binding	5.57E-04
21	GO:0004792: thiosulfate sulfurtransferase activity	6.95E-04
22	GO:0051740: ethylene binding	6.95E-04
23	GO:0015035: protein disulfide oxidoreductase activity	8.35E-04
24	GO:0005524: ATP binding	8.62E-04
25	GO:0004930: G-protein coupled receptor activity	9.21E-04
26	GO:0004674: protein serine/threonine kinase activity	1.13E-03
27	GO:0005516: calmodulin binding	1.14E-03
28	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.20E-03
29	GO:0102391: decanoate--CoA ligase activity	1.71E-03
30	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.97E-03
31	GO:0008320: protein transmembrane transporter activity	2.01E-03
32	GO:0043295: glutathione binding	2.01E-03
33	GO:0004467: long-chain fatty acid-CoA ligase activity	2.01E-03
34	GO:0008235: metalloexopeptidase activity	2.01E-03
35	GO:0005096: GTPase activator activity	2.06E-03
36	GO:0052747: sinapyl alcohol dehydrogenase activity	2.32E-03
37	GO:0004708: MAP kinase kinase activity	2.32E-03
38	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.32E-03
39	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.65E-03
40	GO:0004673: protein histidine kinase activity	3.73E-03
41	GO:0004568: chitinase activity	3.73E-03
42	GO:0004672: protein kinase activity	3.75E-03
43	GO:0001054: RNA polymerase I activity	4.12E-03
44	GO:0004177: aminopeptidase activity	4.12E-03
45	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.52E-03
46	GO:0005388: calcium-transporting ATPase activity	4.93E-03
47	GO:0000175: 3'-5'-exoribonuclease activity	4.93E-03
48	GO:0000155: phosphorelay sensor kinase activity	4.93E-03
49	GO:0004535: poly(A)-specific ribonuclease activity	5.36E-03
50	GO:0008061: chitin binding	5.80E-03
51	GO:0003712: transcription cofactor activity	5.80E-03
52	GO:0004190: aspartic-type endopeptidase activity	5.80E-03
53	GO:0030552: cAMP binding	5.80E-03
54	GO:0030553: cGMP binding	5.80E-03
55	GO:0016746: transferase activity, transferring acyl groups	6.27E-03
56	GO:0003954: NADH dehydrogenase activity	6.71E-03
57	GO:0004407: histone deacetylase activity	6.71E-03
58	GO:0005216: ion channel activity	7.19E-03
59	GO:0004540: ribonuclease activity	7.68E-03
60	GO:0033612: receptor serine/threonine kinase binding	7.68E-03
61	GO:0008408: 3'-5' exonuclease activity	7.68E-03
62	GO:0003756: protein disulfide isomerase activity	9.21E-03
63	GO:0047134: protein-disulfide reductase activity	9.75E-03
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.81E-03
65	GO:0030551: cyclic nucleotide binding	1.03E-02
66	GO:0005249: voltage-gated potassium channel activity	1.03E-02
67	GO:0001085: RNA polymerase II transcription factor binding	1.09E-02
68	GO:0004791: thioredoxin-disulfide reductase activity	1.14E-02
69	GO:0004872: receptor activity	1.20E-02
70	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.50E-02
71	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.77E-02
72	GO:0004004: ATP-dependent RNA helicase activity	1.83E-02
73	GO:0004683: calmodulin-dependent protein kinase activity	1.83E-02
74	GO:0050897: cobalt ion binding	2.19E-02
75	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.19E-02
76	GO:0003697: single-stranded DNA binding	2.33E-02
77	GO:0042393: histone binding	2.56E-02
78	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.62E-02
79	GO:0005509: calcium ion binding	2.70E-02
80	GO:0004364: glutathione transferase activity	2.72E-02
81	GO:0005484: SNAP receptor activity	2.80E-02
82	GO:0015293: symporter activity	3.04E-02
83	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.46E-02
84	GO:0003690: double-stranded DNA binding	3.54E-02
85	GO:0015171: amino acid transmembrane transporter activity	3.72E-02
86	GO:0016491: oxidoreductase activity	4.18E-02
87	GO:0008026: ATP-dependent helicase activity	4.63E-02
88	GO:0004386: helicase activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005886: plasma membrane	3.90E-06
3	GO:0005789: endoplasmic reticulum membrane	6.90E-06
4	GO:0008250: oligosaccharyltransferase complex	2.24E-05
5	GO:0030014: CCR4-NOT complex	1.27E-04
6	GO:0017119: Golgi transport complex	1.83E-04
7	GO:0005783: endoplasmic reticulum	2.80E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	2.94E-04
9	GO:0005901: caveola	2.94E-04
10	GO:0031902: late endosome membrane	3.16E-04
11	GO:0016021: integral component of membrane	6.81E-04
12	GO:0030904: retromer complex	1.43E-03
13	GO:0005887: integral component of plasma membrane	1.77E-03
14	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.01E-03
15	GO:0005742: mitochondrial outer membrane translocase complex	2.65E-03
16	GO:0005736: DNA-directed RNA polymerase I complex	3.00E-03
17	GO:0030665: clathrin-coated vesicle membrane	3.36E-03
18	GO:0043234: protein complex	6.25E-03
19	GO:0005741: mitochondrial outer membrane	7.68E-03
20	GO:0005744: mitochondrial inner membrane presequence translocase complex	9.21E-03
21	GO:0005794: Golgi apparatus	9.70E-03
22	GO:0009505: plant-type cell wall	1.09E-02
23	GO:0009504: cell plate	1.20E-02
24	GO:0032580: Golgi cisterna membrane	1.44E-02
25	GO:0000932: P-body	1.63E-02
26	GO:0016020: membrane	1.64E-02
27	GO:0005667: transcription factor complex	1.77E-02
28	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.79E-02
29	GO:0005829: cytosol	2.18E-02
30	GO:0005743: mitochondrial inner membrane	2.79E-02
31	GO:0010008: endosome membrane	3.98E-02
32	GO:0000139: Golgi membrane	4.33E-02
33	GO:0005774: vacuolar membrane	4.87E-02