GO Enrichment Analysis of Co-expressed Genes with
AT3G02580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 3.03E-08 |
| 4 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.23E-04 |
| 5 | GO:0000481: maturation of 5S rRNA | 1.23E-04 |
| 6 | GO:1904964: positive regulation of phytol biosynthetic process | 1.23E-04 |
| 7 | GO:0042371: vitamin K biosynthetic process | 1.23E-04 |
| 8 | GO:1902458: positive regulation of stomatal opening | 1.23E-04 |
| 9 | GO:0034337: RNA folding | 1.23E-04 |
| 10 | GO:0006633: fatty acid biosynthetic process | 1.76E-04 |
| 11 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.86E-04 |
| 12 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.86E-04 |
| 13 | GO:0010207: photosystem II assembly | 3.07E-04 |
| 14 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.85E-04 |
| 15 | GO:0006833: water transport | 3.85E-04 |
| 16 | GO:2001295: malonyl-CoA biosynthetic process | 4.72E-04 |
| 17 | GO:0006424: glutamyl-tRNA aminoacylation | 6.76E-04 |
| 18 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.76E-04 |
| 19 | GO:1902476: chloride transmembrane transport | 6.76E-04 |
| 20 | GO:0042335: cuticle development | 7.76E-04 |
| 21 | GO:0034220: ion transmembrane transport | 7.76E-04 |
| 22 | GO:2000122: negative regulation of stomatal complex development | 8.97E-04 |
| 23 | GO:0006546: glycine catabolic process | 8.97E-04 |
| 24 | GO:0010037: response to carbon dioxide | 8.97E-04 |
| 25 | GO:0006808: regulation of nitrogen utilization | 8.97E-04 |
| 26 | GO:0015976: carbon utilization | 8.97E-04 |
| 27 | GO:0019464: glycine decarboxylation via glycine cleavage system | 8.97E-04 |
| 28 | GO:0032543: mitochondrial translation | 1.13E-03 |
| 29 | GO:0006564: L-serine biosynthetic process | 1.13E-03 |
| 30 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.13E-03 |
| 31 | GO:0006461: protein complex assembly | 1.13E-03 |
| 32 | GO:0032973: amino acid export | 1.39E-03 |
| 33 | GO:0010190: cytochrome b6f complex assembly | 1.39E-03 |
| 34 | GO:0010027: thylakoid membrane organization | 1.45E-03 |
| 35 | GO:0009854: oxidative photosynthetic carbon pathway | 1.66E-03 |
| 36 | GO:0010411: xyloglucan metabolic process | 1.70E-03 |
| 37 | GO:0018298: protein-chromophore linkage | 1.89E-03 |
| 38 | GO:0030497: fatty acid elongation | 1.95E-03 |
| 39 | GO:0010196: nonphotochemical quenching | 1.95E-03 |
| 40 | GO:0006821: chloride transport | 1.95E-03 |
| 41 | GO:0006401: RNA catabolic process | 1.95E-03 |
| 42 | GO:0043090: amino acid import | 1.95E-03 |
| 43 | GO:0046620: regulation of organ growth | 2.26E-03 |
| 44 | GO:0030091: protein repair | 2.26E-03 |
| 45 | GO:0032508: DNA duplex unwinding | 2.26E-03 |
| 46 | GO:2000070: regulation of response to water deprivation | 2.26E-03 |
| 47 | GO:0009416: response to light stimulus | 2.48E-03 |
| 48 | GO:0007186: G-protein coupled receptor signaling pathway | 2.58E-03 |
| 49 | GO:0009657: plastid organization | 2.58E-03 |
| 50 | GO:0015996: chlorophyll catabolic process | 2.58E-03 |
| 51 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.91E-03 |
| 52 | GO:0010206: photosystem II repair | 2.91E-03 |
| 53 | GO:0080144: amino acid homeostasis | 2.91E-03 |
| 54 | GO:0042546: cell wall biogenesis | 3.18E-03 |
| 55 | GO:0010205: photoinhibition | 3.26E-03 |
| 56 | GO:0009638: phototropism | 3.26E-03 |
| 57 | GO:0006810: transport | 3.47E-03 |
| 58 | GO:0055085: transmembrane transport | 3.57E-03 |
| 59 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.62E-03 |
| 60 | GO:0043069: negative regulation of programmed cell death | 3.62E-03 |
| 61 | GO:0048829: root cap development | 3.62E-03 |
| 62 | GO:0009773: photosynthetic electron transport in photosystem I | 4.00E-03 |
| 63 | GO:0019684: photosynthesis, light reaction | 4.00E-03 |
| 64 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.00E-03 |
| 65 | GO:0043085: positive regulation of catalytic activity | 4.00E-03 |
| 66 | GO:0000038: very long-chain fatty acid metabolic process | 4.00E-03 |
| 67 | GO:0045037: protein import into chloroplast stroma | 4.39E-03 |
| 68 | GO:0015706: nitrate transport | 4.39E-03 |
| 69 | GO:0006006: glucose metabolic process | 4.79E-03 |
| 70 | GO:0010143: cutin biosynthetic process | 5.20E-03 |
| 71 | GO:0010167: response to nitrate | 5.63E-03 |
| 72 | GO:0010025: wax biosynthetic process | 6.06E-03 |
| 73 | GO:0000027: ribosomal large subunit assembly | 6.51E-03 |
| 74 | GO:0005992: trehalose biosynthetic process | 6.51E-03 |
| 75 | GO:0061077: chaperone-mediated protein folding | 7.45E-03 |
| 76 | GO:0031408: oxylipin biosynthetic process | 7.45E-03 |
| 77 | GO:0003333: amino acid transmembrane transport | 7.45E-03 |
| 78 | GO:0006284: base-excision repair | 8.93E-03 |
| 79 | GO:0009306: protein secretion | 8.93E-03 |
| 80 | GO:0009735: response to cytokinin | 1.04E-02 |
| 81 | GO:0006662: glycerol ether metabolic process | 1.05E-02 |
| 82 | GO:0010182: sugar mediated signaling pathway | 1.05E-02 |
| 83 | GO:0006412: translation | 1.08E-02 |
| 84 | GO:1901657: glycosyl compound metabolic process | 1.34E-02 |
| 85 | GO:0055114: oxidation-reduction process | 1.46E-02 |
| 86 | GO:0009658: chloroplast organization | 1.56E-02 |
| 87 | GO:0042254: ribosome biogenesis | 1.59E-02 |
| 88 | GO:0009407: toxin catabolic process | 2.05E-02 |
| 89 | GO:0010119: regulation of stomatal movement | 2.12E-02 |
| 90 | GO:0006865: amino acid transport | 2.19E-02 |
| 91 | GO:0009853: photorespiration | 2.26E-02 |
| 92 | GO:0045454: cell redox homeostasis | 2.33E-02 |
| 93 | GO:0034599: cellular response to oxidative stress | 2.34E-02 |
| 94 | GO:0006869: lipid transport | 2.55E-02 |
| 95 | GO:0009793: embryo development ending in seed dormancy | 2.55E-02 |
| 96 | GO:0006631: fatty acid metabolic process | 2.56E-02 |
| 97 | GO:0009926: auxin polar transport | 2.71E-02 |
| 98 | GO:0009644: response to high light intensity | 2.87E-02 |
| 99 | GO:0008643: carbohydrate transport | 2.87E-02 |
| 100 | GO:0009636: response to toxic substance | 2.95E-02 |
| 101 | GO:0008152: metabolic process | 3.16E-02 |
| 102 | GO:0006364: rRNA processing | 3.35E-02 |
| 103 | GO:0009585: red, far-red light phototransduction | 3.35E-02 |
| 104 | GO:0009409: response to cold | 4.10E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 2 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 3 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 9.94E-05 |
| 6 | GO:0019843: rRNA binding | 1.18E-04 |
| 7 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.23E-04 |
| 8 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.23E-04 |
| 9 | GO:0009671: nitrate:proton symporter activity | 1.23E-04 |
| 10 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.86E-04 |
| 11 | GO:0042389: omega-3 fatty acid desaturase activity | 2.86E-04 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.86E-04 |
| 13 | GO:0005528: FK506 binding | 4.26E-04 |
| 14 | GO:0017150: tRNA dihydrouridine synthase activity | 4.72E-04 |
| 15 | GO:0050734: hydroxycinnamoyltransferase activity | 4.72E-04 |
| 16 | GO:0004075: biotin carboxylase activity | 4.72E-04 |
| 17 | GO:0022891: substrate-specific transmembrane transporter activity | 6.14E-04 |
| 18 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.76E-04 |
| 19 | GO:0010328: auxin influx transmembrane transporter activity | 8.97E-04 |
| 20 | GO:0043495: protein anchor | 8.97E-04 |
| 21 | GO:0005253: anion channel activity | 8.97E-04 |
| 22 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 8.97E-04 |
| 23 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.97E-04 |
| 24 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.02E-03 |
| 25 | GO:0009922: fatty acid elongase activity | 1.13E-03 |
| 26 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.13E-03 |
| 27 | GO:0003989: acetyl-CoA carboxylase activity | 1.13E-03 |
| 28 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.13E-03 |
| 29 | GO:0005247: voltage-gated chloride channel activity | 1.39E-03 |
| 30 | GO:0015250: water channel activity | 1.45E-03 |
| 31 | GO:0016168: chlorophyll binding | 1.53E-03 |
| 32 | GO:0003735: structural constituent of ribosome | 1.63E-03 |
| 33 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.66E-03 |
| 34 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.70E-03 |
| 35 | GO:0019899: enzyme binding | 1.95E-03 |
| 36 | GO:0015112: nitrate transmembrane transporter activity | 3.26E-03 |
| 37 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.56E-03 |
| 38 | GO:0004805: trehalose-phosphatase activity | 3.62E-03 |
| 39 | GO:0008047: enzyme activator activity | 3.62E-03 |
| 40 | GO:0015171: amino acid transmembrane transporter activity | 4.54E-03 |
| 41 | GO:0004871: signal transducer activity | 4.55E-03 |
| 42 | GO:0000175: 3'-5'-exoribonuclease activity | 4.79E-03 |
| 43 | GO:0004565: beta-galactosidase activity | 4.79E-03 |
| 44 | GO:0004089: carbonate dehydratase activity | 4.79E-03 |
| 45 | GO:0008146: sulfotransferase activity | 5.63E-03 |
| 46 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 6.06E-03 |
| 47 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 6.06E-03 |
| 48 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 6.06E-03 |
| 49 | GO:0005509: calcium ion binding | 6.41E-03 |
| 50 | GO:0004540: ribonuclease activity | 7.45E-03 |
| 51 | GO:0004176: ATP-dependent peptidase activity | 7.45E-03 |
| 52 | GO:0030570: pectate lyase activity | 8.43E-03 |
| 53 | GO:0008514: organic anion transmembrane transporter activity | 8.93E-03 |
| 54 | GO:0047134: protein-disulfide reductase activity | 9.45E-03 |
| 55 | GO:0016491: oxidoreductase activity | 1.10E-02 |
| 56 | GO:0004791: thioredoxin-disulfide reductase activity | 1.11E-02 |
| 57 | GO:0048038: quinone binding | 1.22E-02 |
| 58 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.34E-02 |
| 59 | GO:0016597: amino acid binding | 1.52E-02 |
| 60 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.65E-02 |
| 61 | GO:0102483: scopolin beta-glucosidase activity | 1.78E-02 |
| 62 | GO:0008236: serine-type peptidase activity | 1.85E-02 |
| 63 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.91E-02 |
| 64 | GO:0008422: beta-glucosidase activity | 2.41E-02 |
| 65 | GO:0050661: NADP binding | 2.48E-02 |
| 66 | GO:0004364: glutathione transferase activity | 2.63E-02 |
| 67 | GO:0035091: phosphatidylinositol binding | 2.87E-02 |
| 68 | GO:0015293: symporter activity | 2.95E-02 |
| 69 | GO:0051287: NAD binding | 3.11E-02 |
| 70 | GO:0008289: lipid binding | 3.98E-02 |
| 71 | GO:0016746: transferase activity, transferring acyl groups | 4.40E-02 |
| 72 | GO:0015035: protein disulfide oxidoreductase activity | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.51E-20 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 8.10E-12 |
| 3 | GO:0031977: thylakoid lumen | 3.24E-10 |
| 4 | GO:0009570: chloroplast stroma | 3.78E-10 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.49E-09 |
| 6 | GO:0009579: thylakoid | 1.14E-07 |
| 7 | GO:0009941: chloroplast envelope | 2.53E-07 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 3.09E-07 |
| 9 | GO:0019898: extrinsic component of membrane | 1.70E-06 |
| 10 | GO:0030095: chloroplast photosystem II | 8.79E-06 |
| 11 | GO:0042651: thylakoid membrane | 1.84E-05 |
| 12 | GO:0009523: photosystem II | 6.02E-05 |
| 13 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.23E-04 |
| 14 | GO:0042170: plastid membrane | 2.86E-04 |
| 15 | GO:0009528: plastid inner membrane | 4.72E-04 |
| 16 | GO:0005960: glycine cleavage complex | 6.76E-04 |
| 17 | GO:0009534: chloroplast thylakoid | 7.20E-04 |
| 18 | GO:0009527: plastid outer membrane | 8.97E-04 |
| 19 | GO:0000178: exosome (RNase complex) | 1.13E-03 |
| 20 | GO:0034707: chloride channel complex | 1.39E-03 |
| 21 | GO:0009533: chloroplast stromal thylakoid | 1.95E-03 |
| 22 | GO:0015934: large ribosomal subunit | 2.17E-03 |
| 23 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.91E-03 |
| 24 | GO:0032040: small-subunit processome | 4.39E-03 |
| 25 | GO:0031225: anchored component of membrane | 4.88E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 5.83E-03 |
| 27 | GO:0015935: small ribosomal subunit | 7.45E-03 |
| 28 | GO:0009532: plastid stroma | 7.45E-03 |
| 29 | GO:0005840: ribosome | 7.78E-03 |
| 30 | GO:0022626: cytosolic ribosome | 1.10E-02 |
| 31 | GO:0046658: anchored component of plasma membrane | 1.34E-02 |
| 32 | GO:0016020: membrane | 1.44E-02 |
| 33 | GO:0010319: stromule | 1.46E-02 |
| 34 | GO:0000932: P-body | 1.58E-02 |
| 35 | GO:0048046: apoplast | 1.68E-02 |
| 36 | GO:0016021: integral component of membrane | 1.68E-02 |
| 37 | GO:0009707: chloroplast outer membrane | 1.91E-02 |
| 38 | GO:0031969: chloroplast membrane | 1.94E-02 |
| 39 | GO:0022625: cytosolic large ribosomal subunit | 2.04E-02 |
| 40 | GO:0005887: integral component of plasma membrane | 3.88E-02 |