GO Enrichment Analysis of Co-expressed Genes with
AT3G02180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 3 | GO:0042493: response to drug | 0.00E+00 |
| 4 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
| 5 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 6 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 7 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 8 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 9 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 10 | GO:0006412: translation | 2.53E-15 |
| 11 | GO:0042254: ribosome biogenesis | 3.51E-12 |
| 12 | GO:0032544: plastid translation | 1.19E-10 |
| 13 | GO:0010207: photosystem II assembly | 1.86E-05 |
| 14 | GO:0015976: carbon utilization | 2.25E-05 |
| 15 | GO:0009735: response to cytokinin | 2.98E-05 |
| 16 | GO:0015979: photosynthesis | 3.30E-05 |
| 17 | GO:0032543: mitochondrial translation | 3.65E-05 |
| 18 | GO:0042742: defense response to bacterium | 4.81E-05 |
| 19 | GO:0042372: phylloquinone biosynthetic process | 7.58E-05 |
| 20 | GO:0000413: protein peptidyl-prolyl isomerization | 8.49E-05 |
| 21 | GO:0009772: photosynthetic electron transport in photosystem II | 1.01E-04 |
| 22 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.71E-04 |
| 23 | GO:0010442: guard cell morphogenesis | 1.71E-04 |
| 24 | GO:1904964: positive regulation of phytol biosynthetic process | 1.71E-04 |
| 25 | GO:0042759: long-chain fatty acid biosynthetic process | 1.71E-04 |
| 26 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.71E-04 |
| 27 | GO:1902458: positive regulation of stomatal opening | 1.71E-04 |
| 28 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.71E-04 |
| 29 | GO:0060627: regulation of vesicle-mediated transport | 1.71E-04 |
| 30 | GO:0010411: xyloglucan metabolic process | 2.74E-04 |
| 31 | GO:0006949: syncytium formation | 2.80E-04 |
| 32 | GO:0006633: fatty acid biosynthetic process | 3.69E-04 |
| 33 | GO:0006650: glycerophospholipid metabolic process | 3.87E-04 |
| 34 | GO:0070981: L-asparagine biosynthetic process | 3.87E-04 |
| 35 | GO:0006529: asparagine biosynthetic process | 3.87E-04 |
| 36 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.87E-04 |
| 37 | GO:0043039: tRNA aminoacylation | 3.87E-04 |
| 38 | GO:0052541: plant-type cell wall cellulose metabolic process | 3.87E-04 |
| 39 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.87E-04 |
| 40 | GO:0010025: wax biosynthetic process | 5.97E-04 |
| 41 | GO:0006833: water transport | 5.97E-04 |
| 42 | GO:0042546: cell wall biogenesis | 6.23E-04 |
| 43 | GO:0015840: urea transport | 6.32E-04 |
| 44 | GO:0071492: cellular response to UV-A | 6.32E-04 |
| 45 | GO:2001295: malonyl-CoA biosynthetic process | 6.32E-04 |
| 46 | GO:0046168: glycerol-3-phosphate catabolic process | 6.32E-04 |
| 47 | GO:0006424: glutamyl-tRNA aminoacylation | 9.04E-04 |
| 48 | GO:0006986: response to unfolded protein | 9.04E-04 |
| 49 | GO:0055070: copper ion homeostasis | 9.04E-04 |
| 50 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 9.04E-04 |
| 51 | GO:0071484: cellular response to light intensity | 9.04E-04 |
| 52 | GO:0051085: chaperone mediated protein folding requiring cofactor | 9.04E-04 |
| 53 | GO:0051639: actin filament network formation | 9.04E-04 |
| 54 | GO:0006072: glycerol-3-phosphate metabolic process | 9.04E-04 |
| 55 | GO:0009650: UV protection | 9.04E-04 |
| 56 | GO:0009411: response to UV | 9.44E-04 |
| 57 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.44E-04 |
| 58 | GO:0044206: UMP salvage | 1.20E-03 |
| 59 | GO:0010037: response to carbon dioxide | 1.20E-03 |
| 60 | GO:0071486: cellular response to high light intensity | 1.20E-03 |
| 61 | GO:0051764: actin crosslink formation | 1.20E-03 |
| 62 | GO:2000122: negative regulation of stomatal complex development | 1.20E-03 |
| 63 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.52E-03 |
| 64 | GO:0043097: pyrimidine nucleoside salvage | 1.52E-03 |
| 65 | GO:0010236: plastoquinone biosynthetic process | 1.52E-03 |
| 66 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.52E-03 |
| 67 | GO:0031365: N-terminal protein amino acid modification | 1.52E-03 |
| 68 | GO:0006665: sphingolipid metabolic process | 1.52E-03 |
| 69 | GO:0006206: pyrimidine nucleobase metabolic process | 1.87E-03 |
| 70 | GO:0006796: phosphate-containing compound metabolic process | 1.87E-03 |
| 71 | GO:0042549: photosystem II stabilization | 1.87E-03 |
| 72 | GO:0009409: response to cold | 1.89E-03 |
| 73 | GO:0009828: plant-type cell wall loosening | 1.90E-03 |
| 74 | GO:1901259: chloroplast rRNA processing | 2.24E-03 |
| 75 | GO:0017148: negative regulation of translation | 2.24E-03 |
| 76 | GO:0006694: steroid biosynthetic process | 2.24E-03 |
| 77 | GO:0010555: response to mannitol | 2.24E-03 |
| 78 | GO:0009955: adaxial/abaxial pattern specification | 2.24E-03 |
| 79 | GO:0010027: thylakoid membrane organization | 2.26E-03 |
| 80 | GO:0045490: pectin catabolic process | 2.65E-03 |
| 81 | GO:0009817: defense response to fungus, incompatible interaction | 2.94E-03 |
| 82 | GO:2000070: regulation of response to water deprivation | 3.06E-03 |
| 83 | GO:0009642: response to light intensity | 3.06E-03 |
| 84 | GO:0009808: lignin metabolic process | 3.50E-03 |
| 85 | GO:0009932: cell tip growth | 3.50E-03 |
| 86 | GO:0015996: chlorophyll catabolic process | 3.50E-03 |
| 87 | GO:0007186: G-protein coupled receptor signaling pathway | 3.50E-03 |
| 88 | GO:0010206: photosystem II repair | 3.95E-03 |
| 89 | GO:0015780: nucleotide-sugar transport | 3.95E-03 |
| 90 | GO:0009826: unidimensional cell growth | 4.40E-03 |
| 91 | GO:0006631: fatty acid metabolic process | 4.41E-03 |
| 92 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.44E-03 |
| 93 | GO:0043069: negative regulation of programmed cell death | 4.93E-03 |
| 94 | GO:0019538: protein metabolic process | 4.93E-03 |
| 95 | GO:0043085: positive regulation of catalytic activity | 5.45E-03 |
| 96 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.45E-03 |
| 97 | GO:0009773: photosynthetic electron transport in photosystem I | 5.45E-03 |
| 98 | GO:0045037: protein import into chloroplast stroma | 5.98E-03 |
| 99 | GO:0009664: plant-type cell wall organization | 5.99E-03 |
| 100 | GO:0042538: hyperosmotic salinity response | 5.99E-03 |
| 101 | GO:0006006: glucose metabolic process | 6.54E-03 |
| 102 | GO:0019253: reductive pentose-phosphate cycle | 7.11E-03 |
| 103 | GO:0010143: cutin biosynthetic process | 7.11E-03 |
| 104 | GO:0006541: glutamine metabolic process | 7.11E-03 |
| 105 | GO:0055085: transmembrane transport | 7.12E-03 |
| 106 | GO:0006457: protein folding | 7.33E-03 |
| 107 | GO:0045454: cell redox homeostasis | 7.62E-03 |
| 108 | GO:0046688: response to copper ion | 7.69E-03 |
| 109 | GO:0006071: glycerol metabolic process | 8.30E-03 |
| 110 | GO:0051017: actin filament bundle assembly | 8.92E-03 |
| 111 | GO:0019344: cysteine biosynthetic process | 8.92E-03 |
| 112 | GO:0009116: nucleoside metabolic process | 8.92E-03 |
| 113 | GO:0000027: ribosomal large subunit assembly | 8.92E-03 |
| 114 | GO:0006418: tRNA aminoacylation for protein translation | 9.56E-03 |
| 115 | GO:0010026: trichome differentiation | 9.56E-03 |
| 116 | GO:0061077: chaperone-mediated protein folding | 1.02E-02 |
| 117 | GO:0010091: trichome branching | 1.23E-02 |
| 118 | GO:0042335: cuticle development | 1.37E-02 |
| 119 | GO:0034220: ion transmembrane transport | 1.37E-02 |
| 120 | GO:0071555: cell wall organization | 1.44E-02 |
| 121 | GO:0006662: glycerol ether metabolic process | 1.45E-02 |
| 122 | GO:0010182: sugar mediated signaling pathway | 1.45E-02 |
| 123 | GO:0015986: ATP synthesis coupled proton transport | 1.52E-02 |
| 124 | GO:0007018: microtubule-based movement | 1.52E-02 |
| 125 | GO:0009646: response to absence of light | 1.52E-02 |
| 126 | GO:0008654: phospholipid biosynthetic process | 1.60E-02 |
| 127 | GO:0002229: defense response to oomycetes | 1.68E-02 |
| 128 | GO:0016132: brassinosteroid biosynthetic process | 1.68E-02 |
| 129 | GO:0009793: embryo development ending in seed dormancy | 1.69E-02 |
| 130 | GO:0032502: developmental process | 1.76E-02 |
| 131 | GO:0010583: response to cyclopentenone | 1.76E-02 |
| 132 | GO:1901657: glycosyl compound metabolic process | 1.84E-02 |
| 133 | GO:0055114: oxidation-reduction process | 2.34E-02 |
| 134 | GO:0009627: systemic acquired resistance | 2.36E-02 |
| 135 | GO:0016311: dephosphorylation | 2.55E-02 |
| 136 | GO:0018298: protein-chromophore linkage | 2.64E-02 |
| 137 | GO:0009813: flavonoid biosynthetic process | 2.73E-02 |
| 138 | GO:0009834: plant-type secondary cell wall biogenesis | 2.83E-02 |
| 139 | GO:0007568: aging | 2.93E-02 |
| 140 | GO:0010119: regulation of stomatal movement | 2.93E-02 |
| 141 | GO:0034599: cellular response to oxidative stress | 3.22E-02 |
| 142 | GO:0030001: metal ion transport | 3.43E-02 |
| 143 | GO:0009644: response to high light intensity | 3.96E-02 |
| 144 | GO:0008643: carbohydrate transport | 3.96E-02 |
| 145 | GO:0016042: lipid catabolic process | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 5 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 6 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 7 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 8 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 9 | GO:0003735: structural constituent of ribosome | 1.90E-18 |
| 10 | GO:0019843: rRNA binding | 9.67E-16 |
| 11 | GO:0030570: pectate lyase activity | 5.85E-05 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.18E-05 |
| 13 | GO:0051920: peroxiredoxin activity | 7.58E-05 |
| 14 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.30E-04 |
| 15 | GO:0016209: antioxidant activity | 1.30E-04 |
| 16 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.71E-04 |
| 17 | GO:0015200: methylammonium transmembrane transporter activity | 1.71E-04 |
| 18 | GO:0004560: alpha-L-fucosidase activity | 1.71E-04 |
| 19 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.71E-04 |
| 20 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.71E-04 |
| 21 | GO:0004831: tyrosine-tRNA ligase activity | 1.71E-04 |
| 22 | GO:0004071: aspartate-ammonia ligase activity | 1.71E-04 |
| 23 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.74E-04 |
| 24 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.87E-04 |
| 25 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.87E-04 |
| 26 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 3.87E-04 |
| 27 | GO:0004089: carbonate dehydratase activity | 4.24E-04 |
| 28 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.42E-04 |
| 29 | GO:0005504: fatty acid binding | 6.32E-04 |
| 30 | GO:0004075: biotin carboxylase activity | 6.32E-04 |
| 31 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.32E-04 |
| 32 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.32E-04 |
| 33 | GO:0050734: hydroxycinnamoyltransferase activity | 6.32E-04 |
| 34 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.32E-04 |
| 35 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 9.04E-04 |
| 36 | GO:0008097: 5S rRNA binding | 9.04E-04 |
| 37 | GO:0001872: (1->3)-beta-D-glucan binding | 9.04E-04 |
| 38 | GO:0022891: substrate-specific transmembrane transporter activity | 9.44E-04 |
| 39 | GO:0003777: microtubule motor activity | 9.76E-04 |
| 40 | GO:0045430: chalcone isomerase activity | 1.20E-03 |
| 41 | GO:0043495: protein anchor | 1.20E-03 |
| 42 | GO:0015204: urea transmembrane transporter activity | 1.20E-03 |
| 43 | GO:0004659: prenyltransferase activity | 1.20E-03 |
| 44 | GO:0004845: uracil phosphoribosyltransferase activity | 1.20E-03 |
| 45 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.20E-03 |
| 46 | GO:0003989: acetyl-CoA carboxylase activity | 1.52E-03 |
| 47 | GO:0009922: fatty acid elongase activity | 1.52E-03 |
| 48 | GO:0051011: microtubule minus-end binding | 1.52E-03 |
| 49 | GO:0016208: AMP binding | 1.87E-03 |
| 50 | GO:0016462: pyrophosphatase activity | 1.87E-03 |
| 51 | GO:0008519: ammonium transmembrane transporter activity | 1.87E-03 |
| 52 | GO:0004849: uridine kinase activity | 2.24E-03 |
| 53 | GO:0015250: water channel activity | 2.26E-03 |
| 54 | GO:0016168: chlorophyll binding | 2.39E-03 |
| 55 | GO:0019899: enzyme binding | 2.64E-03 |
| 56 | GO:0008235: metalloexopeptidase activity | 2.64E-03 |
| 57 | GO:0004427: inorganic diphosphatase activity | 2.64E-03 |
| 58 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.95E-03 |
| 59 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.95E-03 |
| 60 | GO:0016788: hydrolase activity, acting on ester bonds | 4.73E-03 |
| 61 | GO:0008047: enzyme activator activity | 4.93E-03 |
| 62 | GO:0004177: aminopeptidase activity | 5.45E-03 |
| 63 | GO:0051287: NAD binding | 5.78E-03 |
| 64 | GO:0052689: carboxylic ester hydrolase activity | 6.89E-03 |
| 65 | GO:0005528: FK506 binding | 8.92E-03 |
| 66 | GO:0051087: chaperone binding | 9.56E-03 |
| 67 | GO:0043424: protein histidine kinase binding | 9.56E-03 |
| 68 | GO:0008514: organic anion transmembrane transporter activity | 1.23E-02 |
| 69 | GO:0016829: lyase activity | 1.24E-02 |
| 70 | GO:0047134: protein-disulfide reductase activity | 1.30E-02 |
| 71 | GO:0004812: aminoacyl-tRNA ligase activity | 1.30E-02 |
| 72 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.45E-02 |
| 73 | GO:0005199: structural constituent of cell wall | 1.45E-02 |
| 74 | GO:0008080: N-acetyltransferase activity | 1.45E-02 |
| 75 | GO:0004791: thioredoxin-disulfide reductase activity | 1.52E-02 |
| 76 | GO:0008017: microtubule binding | 1.66E-02 |
| 77 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.84E-02 |
| 78 | GO:0051015: actin filament binding | 1.84E-02 |
| 79 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.01E-02 |
| 80 | GO:0030247: polysaccharide binding | 2.45E-02 |
| 81 | GO:0102483: scopolin beta-glucosidase activity | 2.45E-02 |
| 82 | GO:0004601: peroxidase activity | 2.46E-02 |
| 83 | GO:0016740: transferase activity | 2.64E-02 |
| 84 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.93E-02 |
| 85 | GO:0005507: copper ion binding | 3.20E-02 |
| 86 | GO:0003993: acid phosphatase activity | 3.22E-02 |
| 87 | GO:0008422: beta-glucosidase activity | 3.33E-02 |
| 88 | GO:0050661: NADP binding | 3.43E-02 |
| 89 | GO:0042803: protein homodimerization activity | 3.82E-02 |
| 90 | GO:0003690: double-stranded DNA binding | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 3 | GO:0009570: chloroplast stroma | 4.13E-40 |
| 4 | GO:0009941: chloroplast envelope | 9.58E-32 |
| 5 | GO:0009507: chloroplast | 3.65E-30 |
| 6 | GO:0009579: thylakoid | 5.45E-24 |
| 7 | GO:0005840: ribosome | 1.32E-18 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 2.35E-14 |
| 9 | GO:0031977: thylakoid lumen | 6.83E-13 |
| 10 | GO:0009534: chloroplast thylakoid | 1.94E-11 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 6.56E-11 |
| 12 | GO:0048046: apoplast | 1.12E-07 |
| 13 | GO:0010319: stromule | 2.47E-07 |
| 14 | GO:0030095: chloroplast photosystem II | 1.86E-05 |
| 15 | GO:0031225: anchored component of membrane | 2.06E-05 |
| 16 | GO:0046658: anchored component of plasma membrane | 9.27E-05 |
| 17 | GO:0009923: fatty acid elongase complex | 1.71E-04 |
| 18 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.71E-04 |
| 19 | GO:0000311: plastid large ribosomal subunit | 3.73E-04 |
| 20 | GO:0009528: plastid inner membrane | 6.32E-04 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 7.27E-04 |
| 22 | GO:0009532: plastid stroma | 7.97E-04 |
| 23 | GO:0015935: small ribosomal subunit | 7.97E-04 |
| 24 | GO:0016020: membrane | 8.20E-04 |
| 25 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 9.04E-04 |
| 26 | GO:0032432: actin filament bundle | 9.04E-04 |
| 27 | GO:0009527: plastid outer membrane | 1.20E-03 |
| 28 | GO:0009523: photosystem II | 1.47E-03 |
| 29 | GO:0019898: extrinsic component of membrane | 1.47E-03 |
| 30 | GO:0055035: plastid thylakoid membrane | 1.52E-03 |
| 31 | GO:0009536: plastid | 1.55E-03 |
| 32 | GO:0009505: plant-type cell wall | 1.62E-03 |
| 33 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.87E-03 |
| 34 | GO:0042807: central vacuole | 2.64E-03 |
| 35 | GO:0015934: large ribosomal subunit | 3.39E-03 |
| 36 | GO:0000326: protein storage vacuole | 3.50E-03 |
| 37 | GO:0005763: mitochondrial small ribosomal subunit | 3.95E-03 |
| 38 | GO:0005876: spindle microtubule | 4.44E-03 |
| 39 | GO:0022626: cytosolic ribosome | 4.63E-03 |
| 40 | GO:0005618: cell wall | 5.40E-03 |
| 41 | GO:0005884: actin filament | 5.45E-03 |
| 42 | GO:0022625: cytosolic large ribosomal subunit | 6.47E-03 |
| 43 | GO:0000312: plastid small ribosomal subunit | 7.11E-03 |
| 44 | GO:0042651: thylakoid membrane | 9.56E-03 |
| 45 | GO:0010287: plastoglobule | 1.09E-02 |
| 46 | GO:0005871: kinesin complex | 1.30E-02 |
| 47 | GO:0005778: peroxisomal membrane | 2.01E-02 |
| 48 | GO:0005777: peroxisome | 2.45E-02 |
| 49 | GO:0009707: chloroplast outer membrane | 2.64E-02 |
| 50 | GO:0005874: microtubule | 2.95E-02 |
| 51 | GO:0009506: plasmodesma | 2.96E-02 |
| 52 | GO:0031969: chloroplast membrane | 3.05E-02 |
| 53 | GO:0005819: spindle | 3.33E-02 |