Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G02140

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:0009873: ethylene-activated signaling pathway3.85E-07
3GO:0034605: cellular response to heat1.39E-05
4GO:0080164: regulation of nitric oxide metabolic process1.48E-05
5GO:0055063: sulfate ion homeostasis1.48E-05
6GO:0046500: S-adenosylmethionine metabolic process1.48E-05
7GO:0071497: cellular response to freezing3.88E-05
8GO:0051592: response to calcium ion3.88E-05
9GO:0009414: response to water deprivation8.96E-05
10GO:0046345: abscisic acid catabolic process1.45E-04
11GO:0009751: response to salicylic acid1.65E-04
12GO:0009753: response to jasmonic acid1.86E-04
13GO:0010438: cellular response to sulfur starvation1.88E-04
14GO:0006544: glycine metabolic process1.88E-04
15GO:0006563: L-serine metabolic process2.34E-04
16GO:0009612: response to mechanical stimulus2.82E-04
17GO:0010038: response to metal ion3.32E-04
18GO:0010439: regulation of glucosinolate biosynthetic process3.84E-04
19GO:0045893: positive regulation of transcription, DNA-templated4.33E-04
20GO:0044030: regulation of DNA methylation4.37E-04
21GO:2000031: regulation of salicylic acid mediated signaling pathway4.37E-04
22GO:0048574: long-day photoperiodism, flowering4.37E-04
23GO:0035999: tetrahydrofolate interconversion5.49E-04
24GO:0010540: basipetal auxin transport8.55E-04
25GO:0009658: chloroplast organization1.05E-03
26GO:0006970: response to osmotic stress1.13E-03
27GO:2000022: regulation of jasmonic acid mediated signaling pathway1.26E-03
28GO:0009409: response to cold1.27E-03
29GO:0040007: growth1.34E-03
30GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.34E-03
31GO:0045454: cell redox homeostasis1.54E-03
32GO:0009741: response to brassinosteroid1.65E-03
33GO:0010268: brassinosteroid homeostasis1.65E-03
34GO:0009646: response to absence of light1.73E-03
35GO:0016132: brassinosteroid biosynthetic process1.89E-03
36GO:0002229: defense response to oomycetes1.89E-03
37GO:0009639: response to red or far red light2.15E-03
38GO:0009828: plant-type cell wall loosening2.15E-03
39GO:0016125: sterol metabolic process2.15E-03
40GO:0009737: response to abscisic acid2.25E-03
41GO:0001666: response to hypoxia2.42E-03
42GO:0006357: regulation of transcription from RNA polymerase II promoter2.48E-03
43GO:0010411: xyloglucan metabolic process2.70E-03
44GO:0006355: regulation of transcription, DNA-templated3.01E-03
45GO:0009738: abscisic acid-activated signaling pathway3.20E-03
46GO:0045087: innate immune response3.40E-03
47GO:0042542: response to hydrogen peroxide3.93E-03
48GO:0042546: cell wall biogenesis4.15E-03
49GO:0006351: transcription, DNA-templated4.37E-03
50GO:0009909: regulation of flower development5.31E-03
51GO:0030154: cell differentiation7.25E-03
52GO:0009733: response to auxin7.48E-03
53GO:0042744: hydrogen peroxide catabolic process8.07E-03
54GO:0009739: response to gibberellin9.99E-03
55GO:0046686: response to cadmium ion1.04E-02
56GO:0009826: unidimensional cell growth1.22E-02
57GO:0009723: response to ethylene1.39E-02
58GO:0010200: response to chitin1.50E-02
59GO:0046777: protein autophosphorylation1.53E-02
60GO:0006629: lipid metabolic process1.93E-02
61GO:0009408: response to heat1.93E-02
62GO:0009651: response to salt stress2.25E-02
63GO:0009734: auxin-activated signaling pathway2.46E-02
64GO:0009611: response to wounding2.95E-02
65GO:0035556: intracellular signal transduction3.01E-02
66GO:0042742: defense response to bacterium4.79E-02
67GO:0006979: response to oxidative stress4.82E-02
RankGO TermAdjusted P value
1GO:0010295: (+)-abscisic acid 8'-hydroxylase activity6.95E-05
2GO:0004372: glycine hydroxymethyltransferase activity1.88E-04
3GO:0010427: abscisic acid binding2.34E-04
4GO:0004864: protein phosphatase inhibitor activity6.08E-04
5GO:0044212: transcription regulatory region DNA binding8.78E-04
6GO:0003700: transcription factor activity, sequence-specific DNA binding1.16E-03
7GO:0043565: sequence-specific DNA binding1.27E-03
8GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.54E-03
9GO:0003677: DNA binding1.62E-03
10GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.71E-03
11GO:0004872: receptor activity1.81E-03
12GO:0016762: xyloglucan:xyloglucosyl transferase activity1.89E-03
13GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.24E-03
14GO:0016798: hydrolase activity, acting on glycosyl bonds2.70E-03
15GO:0004806: triglyceride lipase activity2.70E-03
16GO:0005516: calmodulin binding4.96E-03
17GO:0015035: protein disulfide oxidoreductase activity6.44E-03
18GO:0004674: protein serine/threonine kinase activity6.48E-03
19GO:0030170: pyridoxal phosphate binding7.93E-03
20GO:0020037: heme binding1.05E-02
21GO:0004601: peroxidase activity1.25E-02
22GO:0009055: electron carrier activity2.02E-02
23GO:0016301: kinase activity3.06E-02
24GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.54E-02
25GO:0030246: carbohydrate binding3.58E-02
26GO:0019825: oxygen binding3.73E-02
27GO:0005509: calcium ion binding4.53E-02
28GO:0005506: iron ion binding4.74E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0005615: extracellular space7.76E-04
3GO:0009505: plant-type cell wall1.16E-03
4GO:0015629: actin cytoskeleton1.34E-03
5GO:0048046: apoplast4.42E-03
6GO:0005618: cell wall4.92E-03
7GO:0005794: Golgi apparatus8.47E-03
8GO:0005887: integral component of plasma membrane2.40E-02
9GO:0005576: extracellular region2.86E-02
10GO:0005634: nucleus3.18E-02
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Gene type



Gene DE type