Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G01800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0039694: viral RNA genome replication0.00E+00
2GO:0090069: regulation of ribosome biogenesis0.00E+00
3GO:0042430: indole-containing compound metabolic process0.00E+00
4GO:0002376: immune system process0.00E+00
5GO:0007141: male meiosis I0.00E+00
6GO:0030149: sphingolipid catabolic process0.00E+00
7GO:0048227: plasma membrane to endosome transport0.00E+00
8GO:0001881: receptor recycling0.00E+00
9GO:0072722: response to amitrole0.00E+00
10GO:0045454: cell redox homeostasis7.47E-08
11GO:0034976: response to endoplasmic reticulum stress5.10E-05
12GO:0006364: rRNA processing1.90E-04
13GO:0006805: xenobiotic metabolic process2.27E-04
14GO:0006422: aspartyl-tRNA aminoacylation2.27E-04
15GO:1990022: RNA polymerase III complex localization to nucleus2.27E-04
16GO:2000232: regulation of rRNA processing2.27E-04
17GO:0044376: RNA polymerase II complex import to nucleus2.27E-04
18GO:0010265: SCF complex assembly2.27E-04
19GO:0080120: CAAX-box protein maturation2.27E-04
20GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine2.27E-04
21GO:0006177: GMP biosynthetic process2.27E-04
22GO:0071586: CAAX-box protein processing2.27E-04
23GO:0046685: response to arsenic-containing substance3.00E-04
24GO:0009553: embryo sac development3.24E-04
25GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)5.05E-04
26GO:0019752: carboxylic acid metabolic process5.05E-04
27GO:1902000: homogentisate catabolic process5.05E-04
28GO:0031648: protein destabilization5.05E-04
29GO:2000072: regulation of defense response to fungus, incompatible interaction5.05E-04
30GO:0007034: vacuolar transport7.06E-04
31GO:0010150: leaf senescence7.93E-04
32GO:0010272: response to silver ion8.21E-04
33GO:0045039: protein import into mitochondrial inner membrane8.21E-04
34GO:0009072: aromatic amino acid family metabolic process8.21E-04
35GO:0008333: endosome to lysosome transport8.21E-04
36GO:0010359: regulation of anion channel activity8.21E-04
37GO:0009410: response to xenobiotic stimulus8.21E-04
38GO:0000027: ribosomal large subunit assembly9.67E-04
39GO:0009855: determination of bilateral symmetry1.17E-03
40GO:0071323: cellular response to chitin1.17E-03
41GO:0001676: long-chain fatty acid metabolic process1.17E-03
42GO:0048194: Golgi vesicle budding1.17E-03
43GO:0009814: defense response, incompatible interaction1.27E-03
44GO:0042273: ribosomal large subunit biogenesis1.56E-03
45GO:0051205: protein insertion into membrane1.56E-03
46GO:0010188: response to microbial phytotoxin1.56E-03
47GO:0046686: response to cadmium ion1.72E-03
48GO:0006662: glycerol ether metabolic process1.89E-03
49GO:0010197: polar nucleus fusion1.89E-03
50GO:0006564: L-serine biosynthetic process1.99E-03
51GO:0031365: N-terminal protein amino acid modification1.99E-03
52GO:0006461: protein complex assembly1.99E-03
53GO:0006623: protein targeting to vacuole2.18E-03
54GO:0000302: response to reactive oxygen species2.33E-03
55GO:0048232: male gamete generation2.45E-03
56GO:1902456: regulation of stomatal opening2.45E-03
57GO:0018258: protein O-linked glycosylation via hydroxyproline2.45E-03
58GO:0000741: karyogamy2.45E-03
59GO:0010405: arabinogalactan protein metabolic process2.45E-03
60GO:0006751: glutathione catabolic process2.45E-03
61GO:0030163: protein catabolic process2.65E-03
62GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.94E-03
63GO:0009615: response to virus3.36E-03
64GO:0043090: amino acid import3.47E-03
65GO:1900056: negative regulation of leaf senescence3.47E-03
66GO:0080186: developmental vegetative growth3.47E-03
67GO:0050790: regulation of catalytic activity3.47E-03
68GO:0009790: embryo development3.58E-03
69GO:0009819: drought recovery4.02E-03
70GO:0006605: protein targeting4.02E-03
71GO:0000028: ribosomal small subunit assembly4.02E-03
72GO:0030968: endoplasmic reticulum unfolded protein response4.60E-03
73GO:0043562: cellular response to nitrogen levels4.60E-03
74GO:0006499: N-terminal protein myristoylation4.82E-03
75GO:0009407: toxin catabolic process4.82E-03
76GO:0010043: response to zinc ion5.06E-03
77GO:0007338: single fertilization5.22E-03
78GO:0009821: alkaloid biosynthetic process5.22E-03
79GO:0045087: innate immune response5.54E-03
80GO:0034599: cellular response to oxidative stress5.79E-03
81GO:0010205: photoinhibition5.85E-03
82GO:0043067: regulation of programmed cell death5.85E-03
83GO:0048354: mucilage biosynthetic process involved in seed coat development5.85E-03
84GO:0051026: chiasma assembly6.51E-03
85GO:0000103: sulfate assimilation6.51E-03
86GO:0006032: chitin catabolic process6.51E-03
87GO:0000272: polysaccharide catabolic process7.20E-03
88GO:0016485: protein processing7.20E-03
89GO:0006508: proteolysis7.52E-03
90GO:0042254: ribosome biogenesis7.90E-03
91GO:0015706: nitrate transport7.92E-03
92GO:0071365: cellular response to auxin stimulus7.92E-03
93GO:0042742: defense response to bacterium8.01E-03
94GO:0002237: response to molecule of bacterial origin9.42E-03
95GO:0006486: protein glycosylation9.64E-03
96GO:0010167: response to nitrate1.02E-02
97GO:0010053: root epidermal cell differentiation1.02E-02
98GO:0010200: response to chitin1.06E-02
99GO:0006952: defense response1.06E-02
100GO:0009863: salicylic acid mediated signaling pathway1.19E-02
101GO:2000377: regulation of reactive oxygen species metabolic process1.19E-02
102GO:0015031: protein transport1.21E-02
103GO:0016575: histone deacetylation1.27E-02
104GO:0006874: cellular calcium ion homeostasis1.27E-02
105GO:0006457: protein folding1.35E-02
106GO:0016998: cell wall macromolecule catabolic process1.36E-02
107GO:0018105: peptidyl-serine phosphorylation1.42E-02
108GO:0007131: reciprocal meiotic recombination1.45E-02
109GO:0031348: negative regulation of defense response1.45E-02
110GO:0009625: response to insect1.54E-02
111GO:0006012: galactose metabolic process1.54E-02
112GO:0010091: trichome branching1.64E-02
113GO:0042147: retrograde transport, endosome to Golgi1.73E-02
114GO:0042631: cellular response to water deprivation1.83E-02
115GO:0042391: regulation of membrane potential1.83E-02
116GO:0010501: RNA secondary structure unwinding1.83E-02
117GO:0010087: phloem or xylem histogenesis1.83E-02
118GO:0009960: endosperm development1.93E-02
119GO:0006520: cellular amino acid metabolic process1.93E-02
120GO:0042752: regulation of circadian rhythm2.03E-02
121GO:0009646: response to absence of light2.03E-02
122GO:0010193: response to ozone2.24E-02
123GO:0007264: small GTPase mediated signal transduction2.35E-02
124GO:0009651: response to salt stress2.43E-02
125GO:0009567: double fertilization forming a zygote and endosperm2.57E-02
126GO:0006310: DNA recombination2.57E-02
127GO:0007166: cell surface receptor signaling pathway2.73E-02
128GO:0009617: response to bacterium2.85E-02
129GO:0009816: defense response to bacterium, incompatible interaction3.03E-02
130GO:0009607: response to biotic stimulus3.03E-02
131GO:0042128: nitrate assimilation3.15E-02
132GO:0009627: systemic acquired resistance3.15E-02
133GO:0008219: cell death3.52E-02
134GO:0035556: intracellular signal transduction3.65E-02
135GO:0055114: oxidation-reduction process3.66E-02
136GO:0010119: regulation of stomatal movement3.90E-02
137GO:0006865: amino acid transport4.03E-02
138GO:0007049: cell cycle4.11E-02
139GO:0009867: jasmonic acid mediated signaling pathway4.17E-02
140GO:0009723: response to ethylene4.26E-02
141GO:0006631: fatty acid metabolic process4.71E-02
142GO:0046777: protein autophosphorylation4.86E-02
143GO:0006511: ubiquitin-dependent protein catabolic process4.96E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0004164: diphthine synthase activity0.00E+00
3GO:0051670: inulinase activity0.00E+00
4GO:0050220: prostaglandin-E synthase activity0.00E+00
5GO:0016034: maleylacetoacetate isomerase activity0.00E+00
6GO:0030515: snoRNA binding2.58E-06
7GO:0001054: RNA polymerase I activity1.85E-05
8GO:0015035: protein disulfide oxidoreductase activity3.85E-05
9GO:0003756: protein disulfide isomerase activity1.21E-04
10GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.90E-04
11GO:0004815: aspartate-tRNA ligase activity2.27E-04
12GO:0051669: fructan beta-fructosidase activity2.27E-04
13GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.27E-04
14GO:0031219: levanase activity2.27E-04
15GO:0042134: rRNA primary transcript binding2.27E-04
16GO:0008794: arsenate reductase (glutaredoxin) activity4.83E-04
17GO:0001671: ATPase activator activity5.05E-04
18GO:0048531: beta-1,3-galactosyltransferase activity5.05E-04
19GO:0043141: ATP-dependent 5'-3' DNA helicase activity5.05E-04
20GO:0004617: phosphoglycerate dehydrogenase activity5.05E-04
21GO:0003938: IMP dehydrogenase activity5.05E-04
22GO:0008061: chitin binding7.89E-04
23GO:0008430: selenium binding8.21E-04
24GO:0004557: alpha-galactosidase activity8.21E-04
25GO:0003840: gamma-glutamyltransferase activity8.21E-04
26GO:0036374: glutathione hydrolase activity8.21E-04
27GO:0052692: raffinose alpha-galactosidase activity8.21E-04
28GO:0005093: Rab GDP-dissociation inhibitor activity8.21E-04
29GO:0004364: glutathione transferase activity9.28E-04
30GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.17E-03
31GO:0031176: endo-1,4-beta-xylanase activity1.17E-03
32GO:0004301: epoxide hydrolase activity1.56E-03
33GO:0047134: protein-disulfide reductase activity1.63E-03
34GO:0004791: thioredoxin-disulfide reductase activity2.03E-03
35GO:0008026: ATP-dependent helicase activity2.38E-03
36GO:1990714: hydroxyproline O-galactosyltransferase activity2.45E-03
37GO:0031593: polyubiquitin binding2.45E-03
38GO:0030976: thiamine pyrophosphate binding2.45E-03
39GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.65E-03
40GO:0102391: decanoate--CoA ligase activity2.94E-03
41GO:0004012: phospholipid-translocating ATPase activity2.94E-03
42GO:0003978: UDP-glucose 4-epimerase activity2.94E-03
43GO:0004602: glutathione peroxidase activity2.94E-03
44GO:0016831: carboxy-lyase activity3.47E-03
45GO:0008235: metalloexopeptidase activity3.47E-03
46GO:0008121: ubiquinol-cytochrome-c reductase activity3.47E-03
47GO:0008320: protein transmembrane transporter activity3.47E-03
48GO:0043295: glutathione binding3.47E-03
49GO:0004467: long-chain fatty acid-CoA ligase activity3.47E-03
50GO:0009931: calcium-dependent protein serine/threonine kinase activity3.75E-03
51GO:0004683: calmodulin-dependent protein kinase activity3.95E-03
52GO:0005524: ATP binding4.03E-03
53GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)4.60E-03
54GO:0008135: translation factor activity, RNA binding4.60E-03
55GO:0005516: calmodulin binding4.77E-03
56GO:0003678: DNA helicase activity5.22E-03
57GO:0003746: translation elongation factor activity5.54E-03
58GO:0001055: RNA polymerase II activity5.85E-03
59GO:0016844: strictosidine synthase activity5.85E-03
60GO:0015112: nitrate transmembrane transporter activity5.85E-03
61GO:0004713: protein tyrosine kinase activity6.51E-03
62GO:0004568: chitinase activity6.51E-03
63GO:0005509: calcium ion binding6.96E-03
64GO:0004177: aminopeptidase activity7.20E-03
65GO:0005515: protein binding7.66E-03
66GO:0008378: galactosyltransferase activity7.92E-03
67GO:0001056: RNA polymerase III activity7.92E-03
68GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.66E-03
69GO:0043531: ADP binding8.67E-03
70GO:0000166: nucleotide binding9.16E-03
71GO:0004175: endopeptidase activity9.42E-03
72GO:0030553: cGMP binding1.02E-02
73GO:0003712: transcription cofactor activity1.02E-02
74GO:0005217: intracellular ligand-gated ion channel activity1.02E-02
75GO:0004970: ionotropic glutamate receptor activity1.02E-02
76GO:0004190: aspartic-type endopeptidase activity1.02E-02
77GO:0030552: cAMP binding1.02E-02
78GO:0016787: hydrolase activity1.03E-02
79GO:0003954: NADH dehydrogenase activity1.19E-02
80GO:0004407: histone deacetylase activity1.19E-02
81GO:0005216: ion channel activity1.27E-02
82GO:0051087: chaperone binding1.27E-02
83GO:0004298: threonine-type endopeptidase activity1.36E-02
84GO:0009055: electron carrier activity1.82E-02
85GO:0030551: cyclic nucleotide binding1.83E-02
86GO:0005249: voltage-gated potassium channel activity1.83E-02
87GO:0003713: transcription coactivator activity1.93E-02
88GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.22E-02
89GO:0004197: cysteine-type endopeptidase activity2.35E-02
90GO:0003735: structural constituent of ribosome2.60E-02
91GO:0008237: metallopeptidase activity2.68E-02
92GO:0016597: amino acid binding2.80E-02
93GO:0042802: identical protein binding3.03E-02
94GO:0004004: ATP-dependent RNA helicase activity3.27E-02
95GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.52E-02
96GO:0008168: methyltransferase activity3.55E-02
97GO:0005096: GTPase activator activity3.65E-02
98GO:0004222: metalloendopeptidase activity3.77E-02
99GO:0050897: cobalt ion binding3.90E-02
100GO:0003697: single-stranded DNA binding4.17E-02
101GO:0004712: protein serine/threonine/tyrosine kinase activity4.43E-02
102GO:0008233: peptidase activity4.48E-02
103GO:0061630: ubiquitin protein ligase activity4.79E-02
RankGO TermAdjusted P value
1GO:0019034: viral replication complex0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0034457: Mpp10 complex0.00E+00
4GO:0005783: endoplasmic reticulum2.02E-06
5GO:0005730: nucleolus6.59E-06
6GO:0005736: DNA-directed RNA polymerase I complex8.05E-06
7GO:0032040: small-subunit processome2.34E-05
8GO:0005829: cytosol1.91E-04
9GO:0034388: Pwp2p-containing subcomplex of 90S preribosome2.27E-04
10GO:0005788: endoplasmic reticulum lumen4.03E-04
11GO:0031304: intrinsic component of mitochondrial inner membrane5.05E-04
12GO:0070545: PeBoW complex5.05E-04
13GO:0030134: ER to Golgi transport vesicle5.05E-04
14GO:0030139: endocytic vesicle8.21E-04
15GO:0031461: cullin-RING ubiquitin ligase complex1.17E-03
16GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.76E-03
17GO:0030904: retromer complex2.45E-03
18GO:0031428: box C/D snoRNP complex2.45E-03
19GO:0005771: multivesicular body2.45E-03
20GO:0016363: nuclear matrix2.94E-03
21GO:0005801: cis-Golgi network2.94E-03
22GO:0016272: prefoldin complex2.94E-03
23GO:0000794: condensed nuclear chromosome3.47E-03
24GO:0048046: apoplast3.94E-03
25GO:0019773: proteasome core complex, alpha-subunit complex4.60E-03
26GO:0000326: protein storage vacuole4.60E-03
27GO:0005886: plasma membrane4.92E-03
28GO:0005789: endoplasmic reticulum membrane5.35E-03
29GO:0005666: DNA-directed RNA polymerase III complex5.85E-03
30GO:0015030: Cajal body5.85E-03
31GO:0005819: spindle6.05E-03
32GO:0017119: Golgi transport complex6.51E-03
33GO:0000418: DNA-directed RNA polymerase IV complex6.51E-03
34GO:0031902: late endosome membrane6.58E-03
35GO:0008541: proteasome regulatory particle, lid subcomplex7.20E-03
36GO:0005794: Golgi apparatus7.91E-03
37GO:0005665: DNA-directed RNA polymerase II, core complex7.92E-03
38GO:0019013: viral nucleocapsid8.66E-03
39GO:0005840: ribosome8.69E-03
40GO:0005750: mitochondrial respiratory chain complex III9.42E-03
41GO:0005764: lysosome9.42E-03
42GO:0005773: vacuole9.54E-03
43GO:0000502: proteasome complex9.64E-03
44GO:0030176: integral component of endoplasmic reticulum membrane1.02E-02
45GO:0043234: protein complex1.10E-02
46GO:0005839: proteasome core complex1.36E-02
47GO:0015935: small ribosomal subunit1.36E-02
48GO:0000790: nuclear chromatin1.73E-02
49GO:0005623: cell1.77E-02
50GO:0009524: phragmoplast1.82E-02
51GO:0016021: integral component of membrane3.49E-02
52GO:0000151: ubiquitin ligase complex3.52E-02
53GO:0019005: SCF ubiquitin ligase complex3.52E-02
54GO:0005634: nucleus4.79E-02
55GO:0022625: cytosolic large ribosomal subunit4.79E-02
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Gene type



Gene DE type