Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G01310

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
2GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
3GO:0010378: temperature compensation of the circadian clock0.00E+00
4GO:0009768: photosynthesis, light harvesting in photosystem I2.79E-18
5GO:0018298: protein-chromophore linkage3.48E-13
6GO:0009645: response to low light intensity stimulus1.02E-10
7GO:0015979: photosynthesis3.80E-09
8GO:0010218: response to far red light6.03E-09
9GO:0009644: response to high light intensity2.26E-08
10GO:0009769: photosynthesis, light harvesting in photosystem II4.50E-08
11GO:0009637: response to blue light6.46E-07
12GO:0010114: response to red light1.15E-06
13GO:0007623: circadian rhythm1.51E-05
14GO:0015812: gamma-aminobutyric acid transport4.31E-05
15GO:0051170: nuclear import1.07E-04
16GO:0003333: amino acid transmembrane transport1.24E-04
17GO:0048511: rhythmic process1.24E-04
18GO:0010017: red or far-red light signaling pathway1.37E-04
19GO:0006598: polyamine catabolic process1.84E-04
20GO:0009409: response to cold2.42E-04
21GO:0009416: response to light stimulus2.92E-04
22GO:0015846: polyamine transport3.64E-04
23GO:0030104: water homeostasis3.64E-04
24GO:0000003: reproduction3.64E-04
25GO:0009765: photosynthesis, light harvesting3.64E-04
26GO:2000306: positive regulation of photomorphogenesis3.64E-04
27GO:0010600: regulation of auxin biosynthetic process3.64E-04
28GO:0048578: positive regulation of long-day photoperiodism, flowering4.63E-04
29GO:0000160: phosphorelay signal transduction system5.22E-04
30GO:0009635: response to herbicide5.67E-04
31GO:0045962: positive regulation of development, heterochronic5.67E-04
32GO:0080167: response to karrikin5.97E-04
33GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.76E-04
34GO:0042542: response to hydrogen peroxide7.67E-04
35GO:0010161: red light signaling pathway7.90E-04
36GO:1900056: negative regulation of leaf senescence7.90E-04
37GO:0008643: carbohydrate transport8.59E-04
38GO:0009704: de-etiolation9.08E-04
39GO:0010928: regulation of auxin mediated signaling pathway9.08E-04
40GO:0010099: regulation of photomorphogenesis1.03E-03
41GO:0006075: (1->3)-beta-D-glucan biosynthetic process1.03E-03
42GO:0009827: plant-type cell wall modification1.03E-03
43GO:0009585: red, far-red light phototransduction1.06E-03
44GO:0090333: regulation of stomatal closure1.16E-03
45GO:0048354: mucilage biosynthetic process involved in seed coat development1.29E-03
46GO:0010380: regulation of chlorophyll biosynthetic process1.29E-03
47GO:0055062: phosphate ion homeostasis1.43E-03
48GO:0009641: shade avoidance1.43E-03
49GO:0009735: response to cytokinin1.76E-03
50GO:0009718: anthocyanin-containing compound biosynthetic process1.87E-03
51GO:0009266: response to temperature stimulus2.03E-03
52GO:0009269: response to desiccation2.88E-03
53GO:0071215: cellular response to abscisic acid stimulus3.24E-03
54GO:0009658: chloroplast organization3.88E-03
55GO:0006351: transcription, DNA-templated3.89E-03
56GO:0008360: regulation of cell shape4.02E-03
57GO:0006814: sodium ion transport4.23E-03
58GO:0042752: regulation of circadian rhythm4.23E-03
59GO:0006355: regulation of transcription, DNA-templated4.36E-03
60GO:0000302: response to reactive oxygen species4.64E-03
61GO:1901657: glycosyl compound metabolic process5.07E-03
62GO:0045892: negative regulation of transcription, DNA-templated5.84E-03
63GO:0015995: chlorophyll biosynthetic process6.69E-03
64GO:0010119: regulation of stomatal movement7.95E-03
65GO:0009910: negative regulation of flower development7.95E-03
66GO:0051707: response to other organism1.01E-02
67GO:0009640: photomorphogenesis1.01E-02
68GO:0009965: leaf morphogenesis1.10E-02
69GO:0009908: flower development1.14E-02
70GO:0007165: signal transduction1.22E-02
71GO:0009611: response to wounding1.29E-02
72GO:0006857: oligopeptide transport1.31E-02
73GO:0009624: response to nematode1.60E-02
74GO:0055085: transmembrane transport1.60E-02
75GO:0006457: protein folding1.63E-02
76GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.56E-02
77GO:0010468: regulation of gene expression2.68E-02
78GO:0030154: cell differentiation2.78E-02
79GO:0048366: leaf development3.62E-02
80GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.85E-02
81GO:0010200: response to chitin3.85E-02
82GO:0005975: carbohydrate metabolic process3.87E-02
83GO:0046686: response to cadmium ion3.97E-02
84GO:0044550: secondary metabolite biosynthetic process3.99E-02
85GO:0006629: lipid metabolic process4.95E-02
86GO:0009408: response to heat4.95E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0031409: pigment binding1.01E-18
8GO:0016168: chlorophyll binding8.99E-16
9GO:0015185: gamma-aminobutyric acid transmembrane transporter activity4.31E-05
10GO:0080079: cellobiose glucosidase activity4.31E-05
11GO:0015180: L-alanine transmembrane transporter activity1.07E-04
12GO:0046872: metal ion binding1.19E-04
13GO:0046592: polyamine oxidase activity1.84E-04
14GO:0015297: antiporter activity2.42E-04
15GO:0015189: L-lysine transmembrane transporter activity2.70E-04
16GO:0015181: arginine transmembrane transporter activity2.70E-04
17GO:0015203: polyamine transmembrane transporter activity2.70E-04
18GO:0000156: phosphorelay response regulator activity3.02E-04
19GO:0005313: L-glutamate transmembrane transporter activity3.64E-04
20GO:0015293: symporter activity8.91E-04
21GO:0003843: 1,3-beta-D-glucan synthase activity1.03E-03
22GO:0000989: transcription factor activity, transcription factor binding1.16E-03
23GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.16E-03
24GO:0015174: basic amino acid transmembrane transporter activity1.29E-03
25GO:0047372: acylglycerol lipase activity1.57E-03
26GO:0004022: alcohol dehydrogenase (NAD) activity1.87E-03
27GO:0005315: inorganic phosphate transmembrane transporter activity1.87E-03
28GO:0004565: beta-galactosidase activity1.87E-03
29GO:0008131: primary amine oxidase activity2.03E-03
30GO:0005351: sugar:proton symporter activity2.47E-03
31GO:0004707: MAP kinase activity2.88E-03
32GO:0008514: organic anion transmembrane transporter activity3.43E-03
33GO:0102483: scopolin beta-glucosidase activity6.69E-03
34GO:0003993: acid phosphatase activity8.74E-03
35GO:0008422: beta-glucosidase activity9.01E-03
36GO:0005515: protein binding9.24E-03
37GO:0005198: structural molecule activity1.10E-02
38GO:0015171: amino acid transmembrane transporter activity1.34E-02
39GO:0022857: transmembrane transporter activity1.54E-02
40GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.91E-02
41GO:0015144: carbohydrate transmembrane transporter activity2.13E-02
42GO:0005215: transporter activity2.83E-02
43GO:0003677: DNA binding3.42E-02
44GO:0004497: monooxygenase activity3.76E-02
45GO:0061630: ubiquitin protein ligase activity3.89E-02
46GO:0008270: zinc ion binding4.01E-02
47GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.51E-02
RankGO TermAdjusted P value
1GO:0030076: light-harvesting complex2.62E-16
2GO:0009522: photosystem I1.60E-14
3GO:0010287: plastoglobule7.03E-13
4GO:0009579: thylakoid1.90E-10
5GO:0009523: photosystem II6.10E-10
6GO:0009534: chloroplast thylakoid5.80E-09
7GO:0009535: chloroplast thylakoid membrane6.83E-08
8GO:0009941: chloroplast envelope1.54E-06
9GO:0016021: integral component of membrane1.09E-05
10GO:0042651: thylakoid membrane1.12E-04
11GO:0016020: membrane1.26E-04
12GO:0009517: PSII associated light-harvesting complex II3.64E-04
13GO:0000148: 1,3-beta-D-glucan synthase complex1.03E-03
14GO:0009507: chloroplast4.70E-03
15GO:0005887: integral component of plasma membrane9.61E-03
16GO:0031966: mitochondrial membrane1.19E-02
17GO:0016607: nuclear speck1.44E-02
18GO:0005777: peroxisome1.45E-02
19GO:0005654: nucleoplasm1.84E-02
20GO:0005623: cell1.91E-02
21GO:0005618: cell wall2.74E-02
22GO:0009505: plant-type cell wall3.20E-02
<
Gene type



Gene DE type