co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G47930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:1900000: regulation of anthocyanin catabolic process	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0009958: positive gravitropism	2.04E-05
5	GO:0009828: plant-type cell wall loosening	3.92E-05
6	GO:0046520: sphingoid biosynthetic process	8.25E-05
7	GO:0042759: long-chain fatty acid biosynthetic process	8.25E-05
8	GO:0006949: syncytium formation	9.71E-05
9	GO:0009640: photomorphogenesis	1.59E-04
10	GO:0009826: unidimensional cell growth	1.61E-04
11	GO:0010143: cutin biosynthetic process	1.75E-04
12	GO:0010115: regulation of abscisic acid biosynthetic process	1.97E-04
13	GO:0010541: acropetal auxin transport	1.97E-04
14	GO:0001736: establishment of planar polarity	1.97E-04
15	GO:0031648: protein destabilization	1.97E-04
16	GO:0009664: plant-type cell wall organization	2.19E-04
17	GO:0006833: water transport	2.22E-04
18	GO:0010160: formation of animal organ boundary	3.29E-04
19	GO:0015840: urea transport	3.29E-04
20	GO:0045493: xylan catabolic process	3.29E-04
21	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	3.29E-04
22	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.63E-04
23	GO:0048443: stamen development	3.94E-04
24	GO:0034220: ion transmembrane transport	4.61E-04
25	GO:0042631: cellular response to water deprivation	4.61E-04
26	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.75E-04
27	GO:0009650: UV protection	4.75E-04
28	GO:0009647: skotomorphogenesis	4.75E-04
29	GO:0051513: regulation of monopolar cell growth	4.75E-04
30	GO:0080170: hydrogen peroxide transmembrane transport	4.75E-04
31	GO:0043481: anthocyanin accumulation in tissues in response to UV light	4.75E-04
32	GO:0030104: water homeostasis	6.32E-04
33	GO:0006183: GTP biosynthetic process	6.32E-04
34	GO:0022622: root system development	6.32E-04
35	GO:0071555: cell wall organization	6.77E-04
36	GO:0016123: xanthophyll biosynthetic process	8.00E-04
37	GO:0009627: systemic acquired resistance	9.62E-04
38	GO:0007035: vacuolar acidification	9.77E-04
39	GO:0060918: auxin transport	9.77E-04
40	GO:0006751: glutathione catabolic process	9.77E-04
41	GO:0015995: chlorophyll biosynthetic process	1.01E-03
42	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.16E-03
43	GO:0048527: lateral root development	1.28E-03
44	GO:0032880: regulation of protein localization	1.36E-03
45	GO:0009690: cytokinin metabolic process	1.57E-03
46	GO:0009926: auxin polar transport	1.79E-03
47	GO:0051865: protein autoubiquitination	2.02E-03
48	GO:0048589: developmental growth	2.02E-03
49	GO:0009245: lipid A biosynthetic process	2.02E-03
50	GO:0048829: root cap development	2.51E-03
51	GO:0010215: cellulose microfibril organization	2.51E-03
52	GO:0018119: peptidyl-cysteine S-nitrosylation	2.77E-03
53	GO:0048765: root hair cell differentiation	2.77E-03
54	GO:0010015: root morphogenesis	2.77E-03
55	GO:0016024: CDP-diacylglycerol biosynthetic process	3.03E-03
56	GO:0010152: pollen maturation	3.03E-03
57	GO:0008361: regulation of cell size	3.03E-03
58	GO:2000012: regulation of auxin polar transport	3.31E-03
59	GO:0010540: basipetal auxin transport	3.59E-03
60	GO:0009733: response to auxin	3.76E-03
61	GO:0010030: positive regulation of seed germination	3.88E-03
62	GO:0009825: multidimensional cell growth	3.88E-03
63	GO:0010025: wax biosynthetic process	4.18E-03
64	GO:0007017: microtubule-based process	4.80E-03
65	GO:0019953: sexual reproduction	4.80E-03
66	GO:0003333: amino acid transmembrane transport	5.12E-03
67	GO:0015992: proton transport	5.12E-03
68	GO:0048511: rhythmic process	5.12E-03
69	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.45E-03
70	GO:0009411: response to UV	5.78E-03
71	GO:0045490: pectin catabolic process	5.85E-03
72	GO:0006284: base-excision repair	6.13E-03
73	GO:0008284: positive regulation of cell proliferation	6.48E-03
74	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.48E-03
75	GO:0042335: cuticle development	6.83E-03
76	GO:0042752: regulation of circadian rhythm	7.57E-03
77	GO:0055085: transmembrane transport	7.85E-03
78	GO:0009639: response to red or far red light	9.53E-03
79	GO:0009723: response to ethylene	1.05E-02
80	GO:0016126: sterol biosynthetic process	1.08E-02
81	GO:0046777: protein autophosphorylation	1.20E-02
82	GO:0010411: xyloglucan metabolic process	1.21E-02
83	GO:0015979: photosynthesis	1.28E-02
84	GO:0010311: lateral root formation	1.35E-02
85	GO:0010218: response to far red light	1.39E-02
86	GO:0007568: aging	1.44E-02
87	GO:0006865: amino acid transport	1.49E-02
88	GO:0009637: response to blue light	1.54E-02
89	GO:0016042: lipid catabolic process	1.62E-02
90	GO:0006281: DNA repair	1.66E-02
91	GO:0030001: metal ion transport	1.69E-02
92	GO:0010114: response to red light	1.84E-02
93	GO:0042538: hyperosmotic salinity response	2.16E-02
94	GO:0006810: transport	2.31E-02
95	GO:0009734: auxin-activated signaling pathway	2.34E-02
96	GO:0005975: carbohydrate metabolic process	2.40E-02
97	GO:0048316: seed development	2.62E-02
98	GO:0009624: response to nematode	2.93E-02
99	GO:0009416: response to light stimulus	2.95E-02
100	GO:0051726: regulation of cell cycle	3.05E-02
101	GO:0006633: fatty acid biosynthetic process	4.04E-02
102	GO:0009739: response to gibberellin	4.67E-02
103	GO:0010468: regulation of gene expression	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
2	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
3	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
4	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
5	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
6	GO:0010011: auxin binding	6.47E-06
7	GO:0015250: water channel activity	5.17E-05
8	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	8.25E-05
9	GO:0015200: methylammonium transmembrane transporter activity	8.25E-05
10	GO:0000170: sphingosine hydroxylase activity	8.25E-05
11	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	8.25E-05
12	GO:0042284: sphingolipid delta-4 desaturase activity	1.97E-04
13	GO:0016630: protochlorophyllide reductase activity	1.97E-04
14	GO:0003839: gamma-glutamylcyclotransferase activity	1.97E-04
15	GO:0003938: IMP dehydrogenase activity	1.97E-04
16	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.98E-04
17	GO:0005528: FK506 binding	2.48E-04
18	GO:0030570: pectate lyase activity	3.63E-04
19	GO:0016829: lyase activity	5.65E-04
20	GO:0052793: pectin acetylesterase activity	6.32E-04
21	GO:0004506: squalene monooxygenase activity	6.32E-04
22	GO:0009044: xylan 1,4-beta-xylosidase activity	6.32E-04
23	GO:0046556: alpha-L-arabinofuranosidase activity	6.32E-04
24	GO:0015204: urea transmembrane transporter activity	6.32E-04
25	GO:0010328: auxin influx transmembrane transporter activity	6.32E-04
26	GO:0008725: DNA-3-methyladenine glycosylase activity	8.00E-04
27	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	9.77E-04
28	GO:0031177: phosphopantetheine binding	9.77E-04
29	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	9.77E-04
30	GO:0008519: ammonium transmembrane transporter activity	9.77E-04
31	GO:0000035: acyl binding	1.16E-03
32	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.57E-03
33	GO:0052689: carboxylic ester hydrolase activity	1.95E-03
34	GO:0008794: arsenate reductase (glutaredoxin) activity	2.77E-03
35	GO:0046961: proton-transporting ATPase activity, rotational mechanism	2.77E-03
36	GO:0004650: polygalacturonase activity	3.11E-03
37	GO:0010329: auxin efflux transmembrane transporter activity	3.31E-03
38	GO:0008083: growth factor activity	3.59E-03
39	GO:0004707: MAP kinase activity	5.12E-03
40	GO:0019901: protein kinase binding	7.95E-03
41	GO:0016788: hydrolase activity, acting on ester bonds	9.22E-03
42	GO:0016791: phosphatase activity	9.53E-03
43	GO:0005200: structural constituent of cytoskeleton	9.94E-03
44	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.39E-02
45	GO:0003993: acid phosphatase activity	1.59E-02
46	GO:0003924: GTPase activity	1.66E-02
47	GO:0051537: 2 iron, 2 sulfur cluster binding	1.95E-02
48	GO:0043621: protein self-association	1.95E-02
49	GO:0005198: structural molecule activity	2.00E-02
50	GO:0015293: symporter activity	2.00E-02
51	GO:0016491: oxidoreductase activity	2.01E-02
52	GO:0003690: double-stranded DNA binding	2.33E-02
53	GO:0015171: amino acid transmembrane transporter activity	2.45E-02
54	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.62E-02
55	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.74E-02
56	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.74E-02
57	GO:0000166: nucleotide binding	2.95E-02
58	GO:0016746: transferase activity, transferring acyl groups	2.99E-02
59	GO:0015035: protein disulfide oxidoreductase activity	2.99E-02
60	GO:0004252: serine-type endopeptidase activity	3.70E-02
61	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.89E-02
62	GO:0005516: calmodulin binding	4.43E-02
63	GO:0008194: UDP-glycosyltransferase activity	4.67E-02
64	GO:0005525: GTP binding	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009930: longitudinal side of cell surface	0.00E+00
3	GO:0009505: plant-type cell wall	2.59E-07
4	GO:0005576: extracellular region	1.06E-05
5	GO:0042807: central vacuole	3.21E-05
6	GO:0043674: columella	8.25E-05
7	GO:0005618: cell wall	1.40E-04
8	GO:0009897: external side of plasma membrane	3.29E-04
9	GO:0016328: lateral plasma membrane	3.29E-04
10	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	8.00E-04
11	GO:0009506: plasmodesma	9.53E-04
12	GO:0009986: cell surface	1.36E-03
13	GO:0009534: chloroplast thylakoid	1.44E-03
14	GO:0009538: photosystem I reaction center	1.57E-03
15	GO:0031977: thylakoid lumen	1.66E-03
16	GO:0000326: protein storage vacuole	1.79E-03
17	GO:0005887: integral component of plasma membrane	4.13E-03
18	GO:0009543: chloroplast thylakoid lumen	4.25E-03
19	GO:0009705: plant-type vacuole membrane	5.85E-03
20	GO:0009941: chloroplast envelope	1.01E-02
21	GO:0005773: vacuole	1.24E-02
22	GO:0016020: membrane	1.41E-02
23	GO:0005783: endoplasmic reticulum	1.99E-02
24	GO:0048046: apoplast	2.21E-02
25	GO:0010008: endosome membrane	2.62E-02
26	GO:0009535: chloroplast thylakoid membrane	3.89E-02
27	GO:0031225: anchored component of membrane	4.59E-02
28	GO:0005615: extracellular space	4.67E-02