GO Enrichment Analysis of Co-expressed Genes with
AT2G47910
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009249: protein lipoylation | 0.00E+00 |
| 2 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 3 | GO:0090393: sepal giant cell development | 0.00E+00 |
| 4 | GO:0036172: thiamine salvage | 0.00E+00 |
| 5 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 6 | GO:0071482: cellular response to light stimulus | 1.10E-06 |
| 7 | GO:0019253: reductive pentose-phosphate cycle | 7.57E-06 |
| 8 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.15E-05 |
| 9 | GO:0016559: peroxisome fission | 7.12E-05 |
| 10 | GO:0006659: phosphatidylserine biosynthetic process | 1.16E-04 |
| 11 | GO:0006352: DNA-templated transcription, initiation | 1.86E-04 |
| 12 | GO:0009853: photorespiration | 2.10E-04 |
| 13 | GO:0009767: photosynthetic electron transport chain | 2.47E-04 |
| 14 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.69E-04 |
| 15 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.69E-04 |
| 16 | GO:0007031: peroxisome organization | 3.15E-04 |
| 17 | GO:0044375: regulation of peroxisome size | 4.45E-04 |
| 18 | GO:0005977: glycogen metabolic process | 4.45E-04 |
| 19 | GO:0006011: UDP-glucose metabolic process | 4.45E-04 |
| 20 | GO:0006000: fructose metabolic process | 4.45E-04 |
| 21 | GO:0080092: regulation of pollen tube growth | 5.19E-04 |
| 22 | GO:2001141: regulation of RNA biosynthetic process | 6.38E-04 |
| 23 | GO:0032877: positive regulation of DNA endoreduplication | 6.38E-04 |
| 24 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.38E-04 |
| 25 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.38E-04 |
| 26 | GO:0016556: mRNA modification | 6.38E-04 |
| 27 | GO:0033014: tetrapyrrole biosynthetic process | 6.38E-04 |
| 28 | GO:0015743: malate transport | 8.47E-04 |
| 29 | GO:0006546: glycine catabolic process | 8.47E-04 |
| 30 | GO:0006021: inositol biosynthetic process | 8.47E-04 |
| 31 | GO:0071483: cellular response to blue light | 8.47E-04 |
| 32 | GO:0009791: post-embryonic development | 8.79E-04 |
| 33 | GO:0009229: thiamine diphosphate biosynthetic process | 1.07E-03 |
| 34 | GO:0009107: lipoate biosynthetic process | 1.07E-03 |
| 35 | GO:0043097: pyrimidine nucleoside salvage | 1.07E-03 |
| 36 | GO:0010942: positive regulation of cell death | 1.31E-03 |
| 37 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.31E-03 |
| 38 | GO:0070814: hydrogen sulfide biosynthetic process | 1.31E-03 |
| 39 | GO:0006206: pyrimidine nucleobase metabolic process | 1.31E-03 |
| 40 | GO:0009228: thiamine biosynthetic process | 1.31E-03 |
| 41 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.31E-03 |
| 42 | GO:0009854: oxidative photosynthetic carbon pathway | 1.56E-03 |
| 43 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.56E-03 |
| 44 | GO:0042026: protein refolding | 1.56E-03 |
| 45 | GO:0045926: negative regulation of growth | 1.56E-03 |
| 46 | GO:0006458: 'de novo' protein folding | 1.56E-03 |
| 47 | GO:0052543: callose deposition in cell wall | 2.13E-03 |
| 48 | GO:0007155: cell adhesion | 2.13E-03 |
| 49 | GO:0048564: photosystem I assembly | 2.13E-03 |
| 50 | GO:0008610: lipid biosynthetic process | 2.13E-03 |
| 51 | GO:0006002: fructose 6-phosphate metabolic process | 2.43E-03 |
| 52 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.43E-03 |
| 53 | GO:0009657: plastid organization | 2.43E-03 |
| 54 | GO:0006526: arginine biosynthetic process | 2.43E-03 |
| 55 | GO:0000373: Group II intron splicing | 2.74E-03 |
| 56 | GO:0009056: catabolic process | 2.74E-03 |
| 57 | GO:0006783: heme biosynthetic process | 2.74E-03 |
| 58 | GO:0006754: ATP biosynthetic process | 2.74E-03 |
| 59 | GO:0080167: response to karrikin | 3.05E-03 |
| 60 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.07E-03 |
| 61 | GO:0046686: response to cadmium ion | 3.29E-03 |
| 62 | GO:0045036: protein targeting to chloroplast | 3.41E-03 |
| 63 | GO:0010192: mucilage biosynthetic process | 3.41E-03 |
| 64 | GO:0051555: flavonol biosynthetic process | 3.41E-03 |
| 65 | GO:0009970: cellular response to sulfate starvation | 3.41E-03 |
| 66 | GO:0006535: cysteine biosynthetic process from serine | 3.41E-03 |
| 67 | GO:0000103: sulfate assimilation | 3.41E-03 |
| 68 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.76E-03 |
| 69 | GO:0006415: translational termination | 3.76E-03 |
| 70 | GO:0019684: photosynthesis, light reaction | 3.76E-03 |
| 71 | GO:0006096: glycolytic process | 4.44E-03 |
| 72 | GO:0006094: gluconeogenesis | 4.50E-03 |
| 73 | GO:0005986: sucrose biosynthetic process | 4.50E-03 |
| 74 | GO:0006006: glucose metabolic process | 4.50E-03 |
| 75 | GO:0090351: seedling development | 5.29E-03 |
| 76 | GO:0042343: indole glucosinolate metabolic process | 5.29E-03 |
| 77 | GO:0009833: plant-type primary cell wall biogenesis | 5.70E-03 |
| 78 | GO:0019344: cysteine biosynthetic process | 6.12E-03 |
| 79 | GO:0098542: defense response to other organism | 7.00E-03 |
| 80 | GO:0061077: chaperone-mediated protein folding | 7.00E-03 |
| 81 | GO:0016226: iron-sulfur cluster assembly | 7.46E-03 |
| 82 | GO:0019722: calcium-mediated signaling | 8.40E-03 |
| 83 | GO:0042631: cellular response to water deprivation | 9.38E-03 |
| 84 | GO:0048868: pollen tube development | 9.89E-03 |
| 85 | GO:0009741: response to brassinosteroid | 9.89E-03 |
| 86 | GO:0008360: regulation of cell shape | 9.89E-03 |
| 87 | GO:0006814: sodium ion transport | 1.04E-02 |
| 88 | GO:0007059: chromosome segregation | 1.04E-02 |
| 89 | GO:0019252: starch biosynthetic process | 1.09E-02 |
| 90 | GO:0008654: phospholipid biosynthetic process | 1.09E-02 |
| 91 | GO:0006810: transport | 1.13E-02 |
| 92 | GO:0007264: small GTPase mediated signal transduction | 1.20E-02 |
| 93 | GO:0010583: response to cyclopentenone | 1.20E-02 |
| 94 | GO:0007267: cell-cell signaling | 1.37E-02 |
| 95 | GO:0009658: chloroplast organization | 1.43E-02 |
| 96 | GO:0051607: defense response to virus | 1.43E-02 |
| 97 | GO:0009816: defense response to bacterium, incompatible interaction | 1.55E-02 |
| 98 | GO:0007049: cell cycle | 1.60E-02 |
| 99 | GO:0009817: defense response to fungus, incompatible interaction | 1.80E-02 |
| 100 | GO:0030244: cellulose biosynthetic process | 1.80E-02 |
| 101 | GO:0009832: plant-type cell wall biogenesis | 1.86E-02 |
| 102 | GO:0009407: toxin catabolic process | 1.92E-02 |
| 103 | GO:0016051: carbohydrate biosynthetic process | 2.12E-02 |
| 104 | GO:0045454: cell redox homeostasis | 2.13E-02 |
| 105 | GO:0006839: mitochondrial transport | 2.33E-02 |
| 106 | GO:0006631: fatty acid metabolic process | 2.40E-02 |
| 107 | GO:0042742: defense response to bacterium | 2.52E-02 |
| 108 | GO:0009744: response to sucrose | 2.54E-02 |
| 109 | GO:0055114: oxidation-reduction process | 2.56E-02 |
| 110 | GO:0006629: lipid metabolic process | 2.62E-02 |
| 111 | GO:0009636: response to toxic substance | 2.76E-02 |
| 112 | GO:0008152: metabolic process | 2.89E-02 |
| 113 | GO:0006396: RNA processing | 4.13E-02 |
| 114 | GO:0051726: regulation of cell cycle | 4.21E-02 |
| 115 | GO:0009742: brassinosteroid mediated signaling pathway | 4.21E-02 |
| 116 | GO:0009416: response to light stimulus | 4.63E-02 |
| 117 | GO:0009058: biosynthetic process | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 2 | GO:0004417: hydroxyethylthiazole kinase activity | 0.00E+00 |
| 3 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 4 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 5 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 6 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 7 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 8 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 9 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 10 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 11 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 6.10E-06 |
| 12 | GO:0001053: plastid sigma factor activity | 1.15E-05 |
| 13 | GO:0016987: sigma factor activity | 1.15E-05 |
| 14 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.06E-05 |
| 15 | GO:0030941: chloroplast targeting sequence binding | 1.16E-04 |
| 16 | GO:0004325: ferrochelatase activity | 1.16E-04 |
| 17 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.86E-04 |
| 18 | GO:0050017: L-3-cyanoalanine synthase activity | 2.69E-04 |
| 19 | GO:0017118: lipoyltransferase activity | 2.69E-04 |
| 20 | GO:0016415: octanoyltransferase activity | 2.69E-04 |
| 21 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.69E-04 |
| 22 | GO:0004512: inositol-3-phosphate synthase activity | 2.69E-04 |
| 23 | GO:0015367: oxoglutarate:malate antiporter activity | 2.69E-04 |
| 24 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.69E-04 |
| 25 | GO:0004802: transketolase activity | 2.69E-04 |
| 26 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 4.45E-04 |
| 27 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 4.45E-04 |
| 28 | GO:0070330: aromatase activity | 4.45E-04 |
| 29 | GO:0032947: protein complex scaffold | 4.45E-04 |
| 30 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.45E-04 |
| 31 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 6.38E-04 |
| 32 | GO:0016149: translation release factor activity, codon specific | 6.38E-04 |
| 33 | GO:0051861: glycolipid binding | 8.47E-04 |
| 34 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.47E-04 |
| 35 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 8.47E-04 |
| 36 | GO:0008453: alanine-glyoxylate transaminase activity | 8.47E-04 |
| 37 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 8.47E-04 |
| 38 | GO:0008374: O-acyltransferase activity | 1.07E-03 |
| 39 | GO:0018685: alkane 1-monooxygenase activity | 1.07E-03 |
| 40 | GO:0080030: methyl indole-3-acetate esterase activity | 1.31E-03 |
| 41 | GO:0042578: phosphoric ester hydrolase activity | 1.31E-03 |
| 42 | GO:0000210: NAD+ diphosphatase activity | 1.31E-03 |
| 43 | GO:0008194: UDP-glycosyltransferase activity | 1.54E-03 |
| 44 | GO:0004124: cysteine synthase activity | 1.56E-03 |
| 45 | GO:0004849: uridine kinase activity | 1.56E-03 |
| 46 | GO:0043295: glutathione binding | 1.84E-03 |
| 47 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.43E-03 |
| 48 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.74E-03 |
| 49 | GO:0003747: translation release factor activity | 2.74E-03 |
| 50 | GO:0051287: NAD binding | 3.38E-03 |
| 51 | GO:0044183: protein binding involved in protein folding | 3.76E-03 |
| 52 | GO:0004860: protein kinase inhibitor activity | 3.76E-03 |
| 53 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.76E-03 |
| 54 | GO:0031072: heat shock protein binding | 4.50E-03 |
| 55 | GO:0008081: phosphoric diester hydrolase activity | 4.50E-03 |
| 56 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.87E-03 |
| 57 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.87E-03 |
| 58 | GO:0008266: poly(U) RNA binding | 4.89E-03 |
| 59 | GO:0051082: unfolded protein binding | 5.34E-03 |
| 60 | GO:0016787: hydrolase activity | 5.74E-03 |
| 61 | GO:0051536: iron-sulfur cluster binding | 6.12E-03 |
| 62 | GO:0005528: FK506 binding | 6.12E-03 |
| 63 | GO:0016760: cellulose synthase (UDP-forming) activity | 7.92E-03 |
| 64 | GO:0003756: protein disulfide isomerase activity | 8.40E-03 |
| 65 | GO:0019901: protein kinase binding | 1.09E-02 |
| 66 | GO:0048038: quinone binding | 1.15E-02 |
| 67 | GO:0042802: identical protein binding | 1.17E-02 |
| 68 | GO:0016757: transferase activity, transferring glycosyl groups | 1.28E-02 |
| 69 | GO:0016759: cellulose synthase activity | 1.31E-02 |
| 70 | GO:0046982: protein heterodimerization activity | 1.40E-02 |
| 71 | GO:0050660: flavin adenine dinucleotide binding | 1.66E-02 |
| 72 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.92E-02 |
| 73 | GO:0004222: metalloendopeptidase activity | 1.92E-02 |
| 74 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.99E-02 |
| 75 | GO:0050897: cobalt ion binding | 1.99E-02 |
| 76 | GO:0050661: NADP binding | 2.33E-02 |
| 77 | GO:0005506: iron ion binding | 2.47E-02 |
| 78 | GO:0004364: glutathione transferase activity | 2.47E-02 |
| 79 | GO:0005198: structural molecule activity | 2.76E-02 |
| 80 | GO:0009055: electron carrier activity | 2.81E-02 |
| 81 | GO:0003824: catalytic activity | 2.84E-02 |
| 82 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.84E-02 |
| 83 | GO:0016874: ligase activity | 3.87E-02 |
| 84 | GO:0015035: protein disulfide oxidoreductase activity | 4.13E-02 |
| 85 | GO:0016746: transferase activity, transferring acyl groups | 4.13E-02 |
| 86 | GO:0016758: transferase activity, transferring hexosyl groups | 4.65E-02 |
| 87 | GO:0019843: rRNA binding | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.45E-17 |
| 3 | GO:0009570: chloroplast stroma | 9.47E-07 |
| 4 | GO:0005960: glycine cleavage complex | 6.10E-06 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.75E-05 |
| 6 | GO:0009941: chloroplast envelope | 4.62E-05 |
| 7 | GO:0005779: integral component of peroxisomal membrane | 9.00E-05 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.11E-04 |
| 9 | GO:0030095: chloroplast photosystem II | 2.81E-04 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 4.32E-04 |
| 11 | GO:0019898: extrinsic component of membrane | 8.79E-04 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 9.02E-04 |
| 13 | GO:0055035: plastid thylakoid membrane | 1.07E-03 |
| 14 | GO:0005778: peroxisomal membrane | 1.19E-03 |
| 15 | GO:0010319: stromule | 1.19E-03 |
| 16 | GO:0048046: apoplast | 1.34E-03 |
| 17 | GO:0009707: chloroplast outer membrane | 1.73E-03 |
| 18 | GO:0031359: integral component of chloroplast outer membrane | 1.84E-03 |
| 19 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.43E-03 |
| 20 | GO:0005777: peroxisome | 2.67E-03 |
| 21 | GO:0016324: apical plasma membrane | 3.41E-03 |
| 22 | GO:0005765: lysosomal membrane | 3.76E-03 |
| 23 | GO:0019013: viral nucleocapsid | 4.50E-03 |
| 24 | GO:0009508: plastid chromosome | 4.50E-03 |
| 25 | GO:0009706: chloroplast inner membrane | 5.34E-03 |
| 26 | GO:0043231: intracellular membrane-bounded organelle | 5.65E-03 |
| 27 | GO:0009536: plastid | 8.62E-03 |
| 28 | GO:0009579: thylakoid | 1.30E-02 |
| 29 | GO:0009534: chloroplast thylakoid | 1.32E-02 |
| 30 | GO:0009295: nucleoid | 1.37E-02 |
| 31 | GO:0030529: intracellular ribonucleoprotein complex | 1.49E-02 |
| 32 | GO:0031969: chloroplast membrane | 1.78E-02 |
| 33 | GO:0000786: nucleosome | 2.06E-02 |
| 34 | GO:0005819: spindle | 2.26E-02 |
| 35 | GO:0031902: late endosome membrane | 2.40E-02 |
| 36 | GO:0005747: mitochondrial respiratory chain complex I | 3.63E-02 |