co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G47470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
2	GO:0045792: negative regulation of cell size	0.00E+00
3	GO:0071731: response to nitric oxide	0.00E+00
4	GO:0042430: indole-containing compound metabolic process	0.00E+00
5	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
6	GO:0043462: regulation of ATPase activity	0.00E+00
7	GO:0072722: response to amitrole	0.00E+00
8	GO:0006042: glucosamine biosynthetic process	0.00E+00
9	GO:1901137: carbohydrate derivative biosynthetic process	0.00E+00
10	GO:0044794: positive regulation by host of viral process	0.00E+00
11	GO:0006457: protein folding	5.25E-16
12	GO:0034976: response to endoplasmic reticulum stress	9.04E-09
13	GO:0042742: defense response to bacterium	1.30E-06
14	GO:0055074: calcium ion homeostasis	6.12E-06
15	GO:0046686: response to cadmium ion	8.79E-06
16	GO:0006465: signal peptide processing	4.22E-05
17	GO:0045454: cell redox homeostasis	5.10E-05
18	GO:0051707: response to other organism	6.73E-05
19	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.69E-05
20	GO:0009617: response to bacterium	9.61E-05
21	GO:0000302: response to reactive oxygen species	1.54E-04
22	GO:0009651: response to salt stress	1.54E-04
23	GO:0009626: plant-type hypersensitive response	1.74E-04
24	GO:0030968: endoplasmic reticulum unfolded protein response	1.85E-04
25	GO:0000494: box C/D snoRNA 3'-end processing	1.86E-04
26	GO:1990258: histone glutamine methylation	1.86E-04
27	GO:0050691: regulation of defense response to virus by host	1.86E-04
28	GO:0080093: regulation of photorespiration	1.86E-04
29	GO:0031998: regulation of fatty acid beta-oxidation	1.86E-04
30	GO:0009615: response to virus	2.58E-04
31	GO:0009627: systemic acquired resistance	2.99E-04
32	GO:0031204: posttranslational protein targeting to membrane, translocation	4.19E-04
33	GO:0071395: cellular response to jasmonic acid stimulus	4.19E-04
34	GO:2000072: regulation of defense response to fungus, incompatible interaction	4.19E-04
35	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.19E-04
36	GO:0009838: abscission	4.19E-04
37	GO:0045041: protein import into mitochondrial intermembrane space	4.19E-04
38	GO:0009408: response to heat	5.18E-04
39	GO:0006099: tricarboxylic acid cycle	5.29E-04
40	GO:0002237: response to molecule of bacterial origin	5.38E-04
41	GO:0010167: response to nitrate	6.03E-04
42	GO:0010272: response to silver ion	6.84E-04
43	GO:0045039: protein import into mitochondrial inner membrane	6.84E-04
44	GO:0048281: inflorescence morphogenesis	6.84E-04
45	GO:0010581: regulation of starch biosynthetic process	6.84E-04
46	GO:0006954: inflammatory response	6.84E-04
47	GO:1902626: assembly of large subunit precursor of preribosome	6.84E-04
48	GO:0008652: cellular amino acid biosynthetic process	6.84E-04
49	GO:0000027: ribosomal large subunit assembly	7.41E-04
50	GO:0009863: salicylic acid mediated signaling pathway	7.41E-04
51	GO:0007005: mitochondrion organization	9.73E-04
52	GO:0072334: UDP-galactose transmembrane transport	9.77E-04
53	GO:0009855: determination of bilateral symmetry	9.77E-04
54	GO:0006515: misfolded or incompletely synthesized protein catabolic process	9.77E-04
55	GO:0006364: rRNA processing	9.97E-04
56	GO:0006486: protein glycosylation	9.97E-04
57	GO:0009306: protein secretion	1.15E-03
58	GO:0042273: ribosomal large subunit biogenesis	1.29E-03
59	GO:0006621: protein retention in ER lumen	1.29E-03
60	GO:0051205: protein insertion into membrane	1.29E-03
61	GO:0000956: nuclear-transcribed mRNA catabolic process	1.29E-03
62	GO:0010188: response to microbial phytotoxin	1.29E-03
63	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.29E-03
64	GO:0006979: response to oxidative stress	1.34E-03
65	GO:0010197: polar nucleus fusion	1.44E-03
66	GO:0010200: response to chitin	1.45E-03
67	GO:0009553: embryo sac development	1.49E-03
68	GO:0016192: vesicle-mediated transport	1.49E-03
69	GO:0009697: salicylic acid biosynthetic process	1.65E-03
70	GO:0031167: rRNA methylation	1.65E-03
71	GO:2000762: regulation of phenylpropanoid metabolic process	1.65E-03
72	GO:0046283: anthocyanin-containing compound metabolic process	1.65E-03
73	GO:0006564: L-serine biosynthetic process	1.65E-03
74	GO:0006097: glyoxylate cycle	1.65E-03
75	GO:0006461: protein complex assembly	1.65E-03
76	GO:0006468: protein phosphorylation	1.75E-03
77	GO:0010193: response to ozone	1.77E-03
78	GO:0006952: defense response	1.97E-03
79	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.03E-03
80	GO:0010405: arabinogalactan protein metabolic process	2.03E-03
81	GO:0015031: protein transport	2.12E-03
82	GO:0042026: protein refolding	2.43E-03
83	GO:0006458: 'de novo' protein folding	2.43E-03
84	GO:0009751: response to salicylic acid	2.44E-03
85	GO:0071446: cellular response to salicylic acid stimulus	2.87E-03
86	GO:1900056: negative regulation of leaf senescence	2.87E-03
87	GO:0080186: developmental vegetative growth	2.87E-03
88	GO:0010150: leaf senescence	3.09E-03
89	GO:0030162: regulation of proteolysis	3.32E-03
90	GO:0006605: protein targeting	3.32E-03
91	GO:0031540: regulation of anthocyanin biosynthetic process	3.32E-03
92	GO:0006102: isocitrate metabolic process	3.32E-03
93	GO:0001510: RNA methylation	3.80E-03
94	GO:0010204: defense response signaling pathway, resistance gene-independent	3.80E-03
95	GO:0045087: innate immune response	4.19E-03
96	GO:0046685: response to arsenic-containing substance	4.30E-03
97	GO:0006189: 'de novo' IMP biosynthetic process	4.30E-03
98	GO:0015780: nucleotide-sugar transport	4.30E-03
99	GO:0009414: response to water deprivation	4.67E-03
100	GO:0010205: photoinhibition	4.82E-03
101	GO:0043067: regulation of programmed cell death	4.82E-03
102	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.82E-03
103	GO:0051555: flavonol biosynthetic process	5.36E-03
104	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.36E-03
105	GO:0006032: chitin catabolic process	5.36E-03
106	GO:0072593: reactive oxygen species metabolic process	5.92E-03
107	GO:0000272: polysaccharide catabolic process	5.92E-03
108	GO:0009555: pollen development	5.96E-03
109	GO:0009611: response to wounding	6.16E-03
110	GO:0006855: drug transmembrane transport	6.28E-03
111	GO:0015706: nitrate transport	6.51E-03
112	GO:0071365: cellular response to auxin stimulus	6.51E-03
113	GO:0031347: regulation of defense response	6.52E-03
114	GO:0006108: malate metabolic process	7.11E-03
115	GO:0010075: regulation of meristem growth	7.11E-03
116	GO:0051603: proteolysis involved in cellular protein catabolic process	7.51E-03
117	GO:0048467: gynoecium development	7.73E-03
118	GO:0034605: cellular response to heat	7.73E-03
119	GO:0007034: vacuolar transport	7.73E-03
120	GO:0009934: regulation of meristem structural organization	7.73E-03
121	GO:0009969: xyloglucan biosynthetic process	8.37E-03
122	GO:0046688: response to copper ion	8.37E-03
123	GO:0006886: intracellular protein transport	9.25E-03
124	GO:0006511: ubiquitin-dependent protein catabolic process	9.48E-03
125	GO:0009624: response to nematode	1.03E-02
126	GO:0006825: copper ion transport	1.04E-02
127	GO:0061077: chaperone-mediated protein folding	1.11E-02
128	GO:0016998: cell wall macromolecule catabolic process	1.11E-02
129	GO:0030433: ubiquitin-dependent ERAD pathway	1.19E-02
130	GO:0031348: negative regulation of defense response	1.19E-02
131	GO:0009411: response to UV	1.26E-02
132	GO:0009625: response to insect	1.26E-02
133	GO:0042631: cellular response to water deprivation	1.50E-02
134	GO:0008033: tRNA processing	1.50E-02
135	GO:0000413: protein peptidyl-prolyl isomerization	1.50E-02
136	GO:0010118: stomatal movement	1.50E-02
137	GO:0009790: embryo development	1.52E-02
138	GO:0009960: endosperm development	1.58E-02
139	GO:0006662: glycerol ether metabolic process	1.58E-02
140	GO:0009646: response to absence of light	1.66E-02
141	GO:0006891: intra-Golgi vesicle-mediated transport	1.83E-02
142	GO:0006635: fatty acid beta-oxidation	1.83E-02
143	GO:0016032: viral process	1.92E-02
144	GO:0030163: protein catabolic process	2.01E-02
145	GO:0007166: cell surface receptor signaling pathway	2.05E-02
146	GO:0009911: positive regulation of flower development	2.38E-02
147	GO:0001666: response to hypoxia	2.38E-02
148	GO:0009816: defense response to bacterium, incompatible interaction	2.48E-02
149	GO:0042128: nitrate assimilation	2.58E-02
150	GO:0006906: vesicle fusion	2.58E-02
151	GO:0048573: photoperiodism, flowering	2.67E-02
152	GO:0009409: response to cold	2.71E-02
153	GO:0016049: cell growth	2.78E-02
154	GO:0042254: ribosome biogenesis	2.83E-02
155	GO:0008219: cell death	2.88E-02
156	GO:0009832: plant-type cell wall biogenesis	2.98E-02
157	GO:0009407: toxin catabolic process	3.08E-02
158	GO:0048527: lateral root development	3.19E-02
159	GO:0010043: response to zinc ion	3.19E-02
160	GO:0009723: response to ethylene	3.22E-02
161	GO:0009867: jasmonic acid mediated signaling pathway	3.40E-02
162	GO:0034599: cellular response to oxidative stress	3.51E-02
163	GO:0046777: protein autophosphorylation	3.68E-02
164	GO:0006839: mitochondrial transport	3.74E-02
165	GO:0006887: exocytosis	3.85E-02
166	GO:0042542: response to hydrogen peroxide	3.96E-02
167	GO:0009644: response to high light intensity	4.31E-02
168	GO:0000154: rRNA modification	4.43E-02
169	GO:0009636: response to toxic substance	4.43E-02
170	GO:0009965: leaf morphogenesis	4.43E-02
171	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
2	GO:0005046: KDEL sequence binding	0.00E+00
3	GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity	0.00E+00
4	GO:0051082: unfolded protein binding	3.99E-11
5	GO:0005524: ATP binding	1.36E-06
6	GO:0003756: protein disulfide isomerase activity	2.53E-06
7	GO:0005460: UDP-glucose transmembrane transporter activity	1.41E-05
8	GO:0005459: UDP-galactose transmembrane transporter activity	4.22E-05
9	GO:0047631: ADP-ribose diphosphatase activity	4.22E-05
10	GO:0004298: threonine-type endopeptidase activity	5.32E-05
11	GO:0000210: NAD+ diphosphatase activity	6.24E-05
12	GO:0051287: NAD binding	9.59E-05
13	GO:0030515: snoRNA binding	1.15E-04
14	GO:0097367: carbohydrate derivative binding	1.86E-04
15	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.86E-04
16	GO:0048037: cofactor binding	1.86E-04
17	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.86E-04
18	GO:1990259: histone-glutamine methyltransferase activity	1.86E-04
19	GO:0004638: phosphoribosylaminoimidazole carboxylase activity	1.86E-04
20	GO:0008233: peptidase activity	2.43E-04
21	GO:0005509: calcium ion binding	2.82E-04
22	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.68E-04
23	GO:0004617: phosphoglycerate dehydrogenase activity	4.19E-04
24	GO:0017110: nucleoside-diphosphatase activity	4.19E-04
25	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.19E-04
26	GO:0070361: mitochondrial light strand promoter anti-sense binding	4.19E-04
27	GO:0004338: glucan exo-1,3-beta-glucosidase activity	4.19E-04
28	GO:0008517: folic acid transporter activity	4.19E-04
29	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.19E-04
30	GO:0080041: ADP-ribose pyrophosphohydrolase activity	4.19E-04
31	GO:0031072: heat shock protein binding	4.78E-04
32	GO:0003746: translation elongation factor activity	5.00E-04
33	GO:0030246: carbohydrate binding	5.89E-04
34	GO:0016531: copper chaperone activity	6.84E-04
35	GO:0008649: rRNA methyltransferase activity	6.84E-04
36	GO:0000030: mannosyltransferase activity	6.84E-04
37	GO:0019201: nucleotide kinase activity	9.77E-04
38	GO:0035529: NADH pyrophosphatase activity	9.77E-04
39	GO:0004449: isocitrate dehydrogenase (NAD+) activity	9.77E-04
40	GO:0046923: ER retention sequence binding	1.29E-03
41	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.29E-03
42	GO:0016758: transferase activity, transferring hexosyl groups	1.99E-03
43	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.03E-03
44	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	2.03E-03
45	GO:0016615: malate dehydrogenase activity	2.03E-03
46	GO:0004017: adenylate kinase activity	2.43E-03
47	GO:0030060: L-malate dehydrogenase activity	2.43E-03
48	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.87E-03
49	GO:0008320: protein transmembrane transporter activity	2.87E-03
50	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.32E-03
51	GO:0008135: translation factor activity, RNA binding	3.80E-03
52	GO:0004674: protein serine/threonine kinase activity	4.09E-03
53	GO:0008417: fucosyltransferase activity	4.30E-03
54	GO:0015112: nitrate transmembrane transporter activity	4.82E-03
55	GO:0004568: chitinase activity	5.36E-03
56	GO:0008559: xenobiotic-transporting ATPase activity	5.92E-03
57	GO:0044183: protein binding involved in protein folding	5.92E-03
58	GO:0016301: kinase activity	6.26E-03
59	GO:0008378: galactosyltransferase activity	6.51E-03
60	GO:0015114: phosphate ion transmembrane transporter activity	7.11E-03
61	GO:0016298: lipase activity	7.51E-03
62	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.73E-03
63	GO:0031625: ubiquitin protein ligase binding	8.04E-03
64	GO:0008061: chitin binding	8.37E-03
65	GO:0080044: quercetin 7-O-glucosyltransferase activity	9.44E-03
66	GO:0080043: quercetin 3-O-glucosyltransferase activity	9.44E-03
67	GO:0004672: protein kinase activity	9.52E-03
68	GO:0015035: protein disulfide oxidoreductase activity	1.07E-02
69	GO:0035251: UDP-glucosyltransferase activity	1.11E-02
70	GO:0004176: ATP-dependent peptidase activity	1.11E-02
71	GO:0008810: cellulase activity	1.26E-02
72	GO:0047134: protein-disulfide reductase activity	1.42E-02
73	GO:0008565: protein transporter activity	1.55E-02
74	GO:0004791: thioredoxin-disulfide reductase activity	1.66E-02
75	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.67E-02
76	GO:0004872: receptor activity	1.75E-02
77	GO:0008194: UDP-glycosyltransferase activity	2.01E-02
78	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.01E-02
79	GO:0016887: ATPase activity	2.02E-02
80	GO:0008483: transaminase activity	2.19E-02
81	GO:0016597: amino acid binding	2.29E-02
82	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.58E-02
83	GO:0030247: polysaccharide binding	2.67E-02
84	GO:0004683: calmodulin-dependent protein kinase activity	2.67E-02
85	GO:0008236: serine-type peptidase activity	2.78E-02
86	GO:0015238: drug transmembrane transporter activity	2.98E-02
87	GO:0043531: ADP binding	3.05E-02
88	GO:0004222: metalloendopeptidase activity	3.08E-02
89	GO:0050897: cobalt ion binding	3.19E-02
90	GO:0000149: SNARE binding	3.63E-02
91	GO:0004364: glutathione transferase activity	3.96E-02
92	GO:0005484: SNAP receptor activity	4.08E-02
93	GO:0005525: GTP binding	4.44E-02
94	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
4	GO:0005788: endoplasmic reticulum lumen	6.57E-20
5	GO:0005783: endoplasmic reticulum	1.85E-14
6	GO:0005886: plasma membrane	4.92E-11
7	GO:0005773: vacuole	2.12E-06
8	GO:0005774: vacuolar membrane	7.81E-06
9	GO:0009507: chloroplast	2.57E-05
10	GO:0005839: proteasome core complex	5.32E-05
11	GO:0031428: box C/D snoRNP complex	6.24E-05
12	GO:0005618: cell wall	6.88E-05
13	GO:0005801: cis-Golgi network	8.69E-05
14	GO:0000502: proteasome complex	1.16E-04
15	GO:0005787: signal peptidase complex	1.86E-04
16	GO:0031090: organelle membrane	2.25E-04
17	GO:0030134: ER to Golgi transport vesicle	4.19E-04
18	GO:0032040: small-subunit processome	4.20E-04
19	GO:0030176: integral component of endoplasmic reticulum membrane	6.03E-04
20	GO:1990726: Lsm1-7-Pat1 complex	9.77E-04
21	GO:0005730: nucleolus	1.10E-03
22	GO:0009506: plasmodesma	1.28E-03
23	GO:0005794: Golgi apparatus	1.39E-03
24	GO:0048046: apoplast	1.99E-03
25	GO:0030173: integral component of Golgi membrane	2.43E-03
26	GO:0005789: endoplasmic reticulum membrane	3.05E-03
27	GO:0019005: SCF ubiquitin ligase complex	3.31E-03
28	GO:0005688: U6 snRNP	3.32E-03
29	GO:0019773: proteasome core complex, alpha-subunit complex	3.80E-03
30	GO:0046540: U4/U6 x U5 tri-snRNP complex	3.80E-03
31	GO:0000326: protein storage vacuole	3.80E-03
32	GO:0005829: cytosol	4.13E-03
33	GO:0015030: Cajal body	4.82E-03
34	GO:0005740: mitochondrial envelope	5.36E-03
35	GO:0031012: extracellular matrix	7.11E-03
36	GO:0009505: plant-type cell wall	7.23E-03
37	GO:0005739: mitochondrion	7.79E-03
38	GO:0005795: Golgi stack	8.37E-03
39	GO:0005747: mitochondrial respiratory chain complex I	8.87E-03
40	GO:0005758: mitochondrial intermembrane space	9.71E-03
41	GO:0005741: mitochondrial outer membrane	1.11E-02
42	GO:0005623: cell	1.33E-02
43	GO:0016592: mediator complex	1.92E-02
44	GO:0032580: Golgi cisterna membrane	2.10E-02
45	GO:0016020: membrane	2.19E-02
46	GO:0030529: intracellular ribonucleoprotein complex	2.38E-02
47	GO:0016021: integral component of membrane	2.80E-02
48	GO:0000151: ubiquitin ligase complex	2.88E-02
49	GO:0000325: plant-type vacuole	3.19E-02
50	GO:0022625: cytosolic large ribosomal subunit	3.62E-02
51	GO:0031201: SNARE complex	3.85E-02
52	GO:0005743: mitochondrial inner membrane	4.71E-02