Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G47440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
2GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
3GO:0080127: fruit septum development0.00E+00
4GO:0015822: ornithine transport0.00E+00
5GO:0010411: xyloglucan metabolic process2.68E-06
6GO:0042546: cell wall biogenesis1.05E-05
7GO:0000271: polysaccharide biosynthetic process2.24E-05
8GO:0071555: cell wall organization2.35E-05
9GO:0071370: cellular response to gibberellin stimulus9.14E-05
10GO:0033481: galacturonate biosynthetic process9.14E-05
11GO:0000066: mitochondrial ornithine transport9.14E-05
12GO:0019354: siroheme biosynthetic process9.14E-05
13GO:0000038: very long-chain fatty acid metabolic process1.33E-04
14GO:0007154: cell communication2.16E-04
15GO:0071497: cellular response to freezing2.16E-04
16GO:0006556: S-adenosylmethionine biosynthetic process3.61E-04
17GO:0033591: response to L-ascorbic acid3.61E-04
18GO:0019419: sulfate reduction3.61E-04
19GO:0019722: calcium-mediated signaling4.50E-04
20GO:0032456: endocytic recycling5.20E-04
21GO:0051016: barbed-end actin filament capping5.20E-04
22GO:0045489: pectin biosynthetic process5.66E-04
23GO:2000762: regulation of phenylpropanoid metabolic process8.73E-04
24GO:0007267: cell-cell signaling8.83E-04
25GO:0060918: auxin transport1.07E-03
26GO:1900425: negative regulation of defense response to bacterium1.07E-03
27GO:0003006: developmental process involved in reproduction1.07E-03
28GO:0006555: methionine metabolic process1.07E-03
29GO:0009554: megasporogenesis1.27E-03
30GO:0050829: defense response to Gram-negative bacterium1.49E-03
31GO:0051510: regulation of unidimensional cell growth1.49E-03
32GO:0016051: carbohydrate biosynthetic process1.60E-03
33GO:0045010: actin nucleation1.72E-03
34GO:0052543: callose deposition in cell wall1.72E-03
35GO:0010099: regulation of photomorphogenesis1.96E-03
36GO:0048193: Golgi vesicle transport1.96E-03
37GO:0048507: meristem development2.21E-03
38GO:0051865: protein autoubiquitination2.21E-03
39GO:0000902: cell morphogenesis2.21E-03
40GO:0009638: phototropism2.48E-03
41GO:0006779: porphyrin-containing compound biosynthetic process2.48E-03
42GO:0000103: sulfate assimilation2.75E-03
43GO:0043069: negative regulation of programmed cell death2.75E-03
44GO:0009585: red, far-red light phototransduction2.75E-03
45GO:0010582: floral meristem determinacy3.32E-03
46GO:0016024: CDP-diacylglycerol biosynthetic process3.32E-03
47GO:0006468: protein phosphorylation3.43E-03
48GO:0030036: actin cytoskeleton organization3.63E-03
49GO:0018107: peptidyl-threonine phosphorylation3.63E-03
50GO:0048467: gynoecium development3.93E-03
51GO:0034605: cellular response to heat3.93E-03
52GO:0010143: cutin biosynthetic process3.93E-03
53GO:0009969: xyloglucan biosynthetic process4.26E-03
54GO:0009225: nucleotide-sugar metabolic process4.26E-03
55GO:0005985: sucrose metabolic process4.26E-03
56GO:0005992: trehalose biosynthetic process4.92E-03
57GO:0019344: cysteine biosynthetic process4.92E-03
58GO:0006730: one-carbon metabolic process5.98E-03
59GO:0010017: red or far-red light signaling pathway5.98E-03
60GO:0006633: fatty acid biosynthetic process6.10E-03
61GO:0009738: abscisic acid-activated signaling pathway6.61E-03
62GO:0009416: response to light stimulus6.89E-03
63GO:0042335: cuticle development7.51E-03
64GO:0080022: primary root development7.51E-03
65GO:0010087: phloem or xylem histogenesis7.51E-03
66GO:0000226: microtubule cytoskeleton organization7.51E-03
67GO:0009958: positive gravitropism7.91E-03
68GO:0009741: response to brassinosteroid7.91E-03
69GO:0009791: post-embryonic development8.74E-03
70GO:0007264: small GTPase mediated signal transduction9.60E-03
71GO:0009826: unidimensional cell growth9.99E-03
72GO:1901657: glycosyl compound metabolic process1.00E-02
73GO:0009828: plant-type cell wall loosening1.05E-02
74GO:0009860: pollen tube growth1.12E-02
75GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.23E-02
76GO:0080167: response to karrikin1.29E-02
77GO:0048573: photoperiodism, flowering1.33E-02
78GO:0046777: protein autophosphorylation1.38E-02
79GO:0016311: dephosphorylation1.38E-02
80GO:0048767: root hair elongation1.48E-02
81GO:0010218: response to far red light1.54E-02
82GO:0045454: cell redox homeostasis1.54E-02
83GO:0010119: regulation of stomatal movement1.59E-02
84GO:0006839: mitochondrial transport1.86E-02
85GO:0009733: response to auxin1.95E-02
86GO:0010114: response to red light2.03E-02
87GO:0016567: protein ubiquitination2.08E-02
88GO:0031347: regulation of defense response2.32E-02
89GO:0009809: lignin biosynthetic process2.51E-02
90GO:0006486: protein glycosylation2.51E-02
91GO:0051603: proteolysis involved in cellular protein catabolic process2.57E-02
92GO:0009734: auxin-activated signaling pathway2.69E-02
93GO:0018105: peptidyl-serine phosphorylation3.29E-02
94GO:0009742: brassinosteroid mediated signaling pathway3.36E-02
95GO:0035556: intracellular signal transduction3.57E-02
96GO:0009845: seed germination4.00E-02
97GO:0040008: regulation of growth4.60E-02
RankGO TermAdjusted P value
1GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
2GO:0016762: xyloglucan:xyloglucosyl transferase activity3.57E-05
3GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.10E-05
4GO:0016798: hydrolase activity, acting on glycosyl bonds8.17E-05
5GO:0080132: fatty acid alpha-hydroxylase activity9.14E-05
6GO:0009973: adenylyl-sulfate reductase activity2.16E-04
7GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity2.16E-04
8GO:0033741: adenylyl-sulfate reductase (glutathione) activity2.16E-04
9GO:0000064: L-ornithine transmembrane transporter activity2.16E-04
10GO:0004478: methionine adenosyltransferase activity3.61E-04
11GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.80E-04
12GO:0001872: (1->3)-beta-D-glucan binding5.20E-04
13GO:0033843: xyloglucan 6-xylosyltransferase activity5.20E-04
14GO:0016758: transferase activity, transferring hexosyl groups5.87E-04
15GO:0050378: UDP-glucuronate 4-epimerase activity6.90E-04
16GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.07E-03
17GO:0035252: UDP-xylosyltransferase activity1.07E-03
18GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.07E-03
19GO:0030247: polysaccharide binding1.15E-03
20GO:0019900: kinase binding1.27E-03
21GO:0004564: beta-fructofuranosidase activity1.72E-03
22GO:0004575: sucrose alpha-glucosidase activity2.48E-03
23GO:0004805: trehalose-phosphatase activity2.75E-03
24GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.93E-03
25GO:0004674: protein serine/threonine kinase activity4.30E-03
26GO:0102337: 3-oxo-cerotoyl-CoA synthase activity4.58E-03
27GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity4.58E-03
28GO:0102336: 3-oxo-arachidoyl-CoA synthase activity4.58E-03
29GO:0008134: transcription factor binding4.92E-03
30GO:0004672: protein kinase activity6.96E-03
31GO:0016757: transferase activity, transferring glycosyl groups7.31E-03
32GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.00E-02
33GO:0051015: actin filament binding1.00E-02
34GO:0016791: phosphatase activity1.05E-02
35GO:0016759: cellulose synthase activity1.05E-02
36GO:0016722: oxidoreductase activity, oxidizing metal ions1.09E-02
37GO:0102483: scopolin beta-glucosidase activity1.33E-02
38GO:0004871: signal transducer activity1.62E-02
39GO:0008422: beta-glucosidase activity1.80E-02
40GO:0003924: GTPase activity1.91E-02
41GO:0004185: serine-type carboxypeptidase activity2.03E-02
42GO:0009055: electron carrier activity2.05E-02
43GO:0043621: protein self-association2.14E-02
44GO:0004842: ubiquitin-protein transferase activity2.54E-02
45GO:0016298: lipase activity2.57E-02
46GO:0003779: actin binding3.16E-02
47GO:0015035: protein disulfide oxidoreductase activity3.29E-02
48GO:0016746: transferase activity, transferring acyl groups3.29E-02
49GO:0016301: kinase activity4.44E-02
50GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.52E-02
51GO:0005507: copper ion binding4.79E-02
RankGO TermAdjusted P value
1GO:0009505: plant-type cell wall4.70E-07
2GO:0031225: anchored component of membrane8.75E-07
3GO:0046658: anchored component of plasma membrane1.29E-05
4GO:0009506: plasmodesma3.28E-05
5GO:0005886: plasma membrane9.05E-05
6GO:0005618: cell wall2.06E-04
7GO:0005775: vacuolar lumen5.20E-04
8GO:0035619: root hair tip5.20E-04
9GO:0032588: trans-Golgi network membrane1.07E-03
10GO:0005794: Golgi apparatus1.08E-03
11GO:0005576: extracellular region1.20E-03
12GO:0000139: Golgi membrane1.46E-03
13GO:0031901: early endosome membrane2.21E-03
14GO:0048046: apoplast2.37E-03
15GO:0016021: integral component of membrane3.60E-03
16GO:0032580: Golgi cisterna membrane1.05E-02
17GO:0005773: vacuole1.58E-02
18GO:0000325: plant-type vacuole1.59E-02
19GO:0000786: nucleosome1.64E-02
20GO:0031902: late endosome membrane1.91E-02
21GO:0005789: endoplasmic reticulum membrane2.87E-02
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Gene type



Gene DE type