Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46710

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090627: plant epidermal cell differentiation0.00E+00
2GO:0090706: specification of plant organ position0.00E+00
3GO:0045014: negative regulation of transcription by glucose0.00E+00
4GO:0009734: auxin-activated signaling pathway2.28E-08
5GO:0046620: regulation of organ growth2.67E-07
6GO:0009733: response to auxin1.36E-06
7GO:0051513: regulation of monopolar cell growth2.91E-06
8GO:0009926: auxin polar transport5.71E-06
9GO:0010206: photosystem II repair5.84E-05
10GO:0015671: oxygen transport7.58E-05
11GO:0043266: regulation of potassium ion transport7.58E-05
12GO:2000021: regulation of ion homeostasis7.58E-05
13GO:0010450: inflorescence meristem growth7.58E-05
14GO:0000476: maturation of 4.5S rRNA7.58E-05
15GO:0000967: rRNA 5'-end processing7.58E-05
16GO:0016024: CDP-diacylglycerol biosynthetic process1.18E-04
17GO:0010541: acropetal auxin transport1.81E-04
18GO:0034470: ncRNA processing1.81E-04
19GO:0045493: xylan catabolic process3.05E-04
20GO:0045165: cell fate commitment3.05E-04
21GO:0010160: formation of animal organ boundary3.05E-04
22GO:0048443: stamen development3.52E-04
23GO:0034220: ion transmembrane transport4.12E-04
24GO:0080170: hydrogen peroxide transmembrane transport4.41E-04
25GO:0043481: anthocyanin accumulation in tissues in response to UV light4.41E-04
26GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity4.41E-04
27GO:0030104: water homeostasis5.87E-04
28GO:1902183: regulation of shoot apical meristem development7.44E-04
29GO:0010158: abaxial cell fate specification7.44E-04
30GO:0009913: epidermal cell differentiation9.07E-04
31GO:0006655: phosphatidylglycerol biosynthetic process9.07E-04
32GO:0060918: auxin transport9.07E-04
33GO:0015995: chlorophyll biosynthetic process9.08E-04
34GO:0009942: longitudinal axis specification1.08E-03
35GO:1900057: positive regulation of leaf senescence1.26E-03
36GO:1900056: negative regulation of leaf senescence1.26E-03
37GO:0050829: defense response to Gram-negative bacterium1.26E-03
38GO:0030091: protein repair1.46E-03
39GO:0006631: fatty acid metabolic process1.48E-03
40GO:0007389: pattern specification process1.66E-03
41GO:0010093: specification of floral organ identity1.66E-03
42GO:2000024: regulation of leaf development1.87E-03
43GO:0048589: developmental growth1.87E-03
44GO:0009245: lipid A biosynthetic process1.87E-03
45GO:0019432: triglyceride biosynthetic process1.87E-03
46GO:1903507: negative regulation of nucleic acid-templated transcription2.56E-03
47GO:0010015: root morphogenesis2.56E-03
48GO:0010152: pollen maturation2.80E-03
49GO:0008361: regulation of cell size2.80E-03
50GO:0010588: cotyledon vascular tissue pattern formation3.06E-03
51GO:0010540: basipetal auxin transport3.32E-03
52GO:0010143: cutin biosynthetic process3.32E-03
53GO:0009933: meristem structural organization3.32E-03
54GO:0010207: photosystem II assembly3.32E-03
55GO:0010030: positive regulation of seed germination3.59E-03
56GO:0006636: unsaturated fatty acid biosynthetic process3.86E-03
57GO:0006833: water transport3.86E-03
58GO:0009944: polarity specification of adaxial/abaxial axis4.15E-03
59GO:0007017: microtubule-based process4.43E-03
60GO:0048511: rhythmic process4.73E-03
61GO:0006633: fatty acid biosynthetic process4.75E-03
62GO:0040008: regulation of growth4.98E-03
63GO:2000022: regulation of jasmonic acid mediated signaling pathway5.03E-03
64GO:0045490: pectin catabolic process5.21E-03
65GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.34E-03
66GO:0009789: positive regulation of abscisic acid-activated signaling pathway5.98E-03
67GO:0080022: primary root development6.31E-03
68GO:0010087: phloem or xylem histogenesis6.31E-03
69GO:0042631: cellular response to water deprivation6.31E-03
70GO:0042335: cuticle development6.31E-03
71GO:0010154: fruit development6.64E-03
72GO:0010305: leaf vascular tissue pattern formation6.64E-03
73GO:0009958: positive gravitropism6.64E-03
74GO:0055085: transmembrane transport6.77E-03
75GO:0042752: regulation of circadian rhythm6.99E-03
76GO:0048825: cotyledon development7.34E-03
77GO:0007275: multicellular organism development7.37E-03
78GO:0010583: response to cyclopentenone8.05E-03
79GO:1901657: glycosyl compound metabolic process8.42E-03
80GO:0030163: protein catabolic process8.42E-03
81GO:0009828: plant-type cell wall loosening8.79E-03
82GO:0010252: auxin homeostasis8.79E-03
83GO:0009639: response to red or far red light8.79E-03
84GO:0009627: systemic acquired resistance1.07E-02
85GO:0010411: xyloglucan metabolic process1.12E-02
86GO:0010218: response to far red light1.28E-02
87GO:0009631: cold acclimation1.33E-02
88GO:0048527: lateral root development1.33E-02
89GO:0009637: response to blue light1.42E-02
90GO:0016042: lipid catabolic process1.44E-02
91GO:0048364: root development1.54E-02
92GO:0009640: photomorphogenesis1.70E-02
93GO:0031347: regulation of defense response1.94E-02
94GO:0009664: plant-type cell wall organization1.99E-02
95GO:0042538: hyperosmotic salinity response1.99E-02
96GO:0009909: regulation of flower development2.25E-02
97GO:0009735: response to cytokinin2.41E-02
98GO:0048367: shoot system development2.42E-02
99GO:0009416: response to light stimulus2.63E-02
100GO:0042545: cell wall modification2.64E-02
101GO:0009624: response to nematode2.69E-02
102GO:0009845: seed germination3.34E-02
103GO:0009793: embryo development ending in seed dormancy3.51E-02
104GO:0007623: circadian rhythm3.98E-02
105GO:0006470: protein dephosphorylation4.37E-02
RankGO TermAdjusted P value
1GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
2GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
3GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
4GO:0005344: oxygen transporter activity7.58E-05
5GO:0010329: auxin efflux transmembrane transporter activity1.36E-04
6GO:0004312: fatty acid synthase activity1.81E-04
7GO:0005528: FK506 binding2.20E-04
8GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity3.05E-04
9GO:0016851: magnesium chelatase activity4.41E-04
10GO:0009044: xylan 1,4-beta-xylosidase activity5.87E-04
11GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity5.87E-04
12GO:0046556: alpha-L-arabinofuranosidase activity5.87E-04
13GO:0010011: auxin binding5.87E-04
14GO:0016791: phosphatase activity6.56E-04
15GO:0015250: water channel activity7.77E-04
16GO:0031177: phosphopantetheine binding9.07E-04
17GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity9.07E-04
18GO:0004366: glycerol-3-phosphate O-acyltransferase activity9.07E-04
19GO:0000035: acyl binding1.08E-03
20GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.08E-03
21GO:0004712: protein serine/threonine/tyrosine kinase activity1.36E-03
22GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.46E-03
23GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.86E-03
24GO:0009672: auxin:proton symporter activity2.09E-03
25GO:0031072: heat shock protein binding3.06E-03
26GO:0016746: transferase activity, transferring acyl groups3.12E-03
27GO:0016829: lyase activity4.10E-03
28GO:0003714: transcription corepressor activity4.15E-03
29GO:0030570: pectate lyase activity5.34E-03
30GO:0003756: protein disulfide isomerase activity5.66E-03
31GO:0005515: protein binding7.71E-03
32GO:0016788: hydrolase activity, acting on ester bonds8.21E-03
33GO:0005200: structural constituent of cytoskeleton9.17E-03
34GO:0052689: carboxylic ester hydrolase activity1.11E-02
35GO:0102483: scopolin beta-glucosidase activity1.12E-02
36GO:0008236: serine-type peptidase activity1.16E-02
37GO:0004722: protein serine/threonine phosphatase activity1.32E-02
38GO:0003746: translation elongation factor activity1.42E-02
39GO:0003993: acid phosphatase activity1.46E-02
40GO:0008422: beta-glucosidase activity1.51E-02
41GO:0008289: lipid binding2.06E-02
42GO:0046872: metal ion binding2.25E-02
43GO:0045330: aspartyl esterase activity2.25E-02
44GO:0004650: polygalacturonase activity2.53E-02
45GO:0016874: ligase activity2.58E-02
46GO:0030599: pectinesterase activity2.58E-02
47GO:0051082: unfolded protein binding2.69E-02
48GO:0004252: serine-type endopeptidase activity3.41E-02
49GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.47E-02
50GO:0046910: pectinesterase inhibitor activity3.78E-02
51GO:0005525: GTP binding4.31E-02
52GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.71E-02
53GO:0042802: identical protein binding4.71E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0009543: chloroplast thylakoid lumen1.46E-06
3GO:0009534: chloroplast thylakoid2.50E-05
4GO:0043674: columella7.58E-05
5GO:0009570: chloroplast stroma9.27E-05
6GO:0031977: thylakoid lumen1.20E-04
7GO:0009507: chloroplast1.30E-04
8GO:0010007: magnesium chelatase complex3.05E-04
9GO:0042807: central vacuole1.26E-03
10GO:0009533: chloroplast stromal thylakoid1.26E-03
11GO:0045298: tubulin complex1.87E-03
12GO:0008180: COP9 signalosome1.87E-03
13GO:0009535: chloroplast thylakoid membrane2.25E-03
14GO:0009941: chloroplast envelope2.36E-03
15GO:0009505: plant-type cell wall3.72E-03
16GO:0009705: plant-type vacuole membrane5.21E-03
17GO:0009579: thylakoid6.27E-03
18GO:0071944: cell periphery8.42E-03
19GO:0031969: chloroplast membrane1.00E-02
20GO:0005886: plasma membrane1.01E-02
21GO:0019005: SCF ubiquitin ligase complex1.20E-02
22GO:0005887: integral component of plasma membrane2.01E-02
23GO:0000502: proteasome complex2.10E-02
24GO:0005618: cell wall2.11E-02
25GO:0005576: extracellular region3.64E-02
26GO:0009506: plasmodesma4.72E-02
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Gene type



Gene DE type