GO Enrichment Analysis of Co-expressed Genes with
AT2G46600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001881: receptor recycling | 0.00E+00 |
| 2 | GO:0016139: glycoside catabolic process | 0.00E+00 |
| 3 | GO:1900409: positive regulation of cellular response to oxidative stress | 0.00E+00 |
| 4 | GO:0072722: response to amitrole | 0.00E+00 |
| 5 | GO:1901017: negative regulation of potassium ion transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 7 | GO:0002376: immune system process | 0.00E+00 |
| 8 | GO:0010360: negative regulation of anion channel activity | 0.00E+00 |
| 9 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 10 | GO:0006793: phosphorus metabolic process | 0.00E+00 |
| 11 | GO:0046686: response to cadmium ion | 2.75E-06 |
| 12 | GO:0006805: xenobiotic metabolic process | 1.54E-04 |
| 13 | GO:0009962: regulation of flavonoid biosynthetic process | 1.54E-04 |
| 14 | GO:1902361: mitochondrial pyruvate transmembrane transport | 1.54E-04 |
| 15 | GO:0010265: SCF complex assembly | 1.54E-04 |
| 16 | GO:0045454: cell redox homeostasis | 2.12E-04 |
| 17 | GO:0010150: leaf senescence | 3.40E-04 |
| 18 | GO:0071395: cellular response to jasmonic acid stimulus | 3.51E-04 |
| 19 | GO:0006850: mitochondrial pyruvate transport | 3.51E-04 |
| 20 | GO:0019752: carboxylic acid metabolic process | 3.51E-04 |
| 21 | GO:1902000: homogentisate catabolic process | 3.51E-04 |
| 22 | GO:0019441: tryptophan catabolic process to kynurenine | 3.51E-04 |
| 23 | GO:0051592: response to calcium ion | 3.51E-04 |
| 24 | GO:0031648: protein destabilization | 3.51E-04 |
| 25 | GO:0007034: vacuolar transport | 4.15E-04 |
| 26 | GO:0009410: response to xenobiotic stimulus | 5.75E-04 |
| 27 | GO:0010272: response to silver ion | 5.75E-04 |
| 28 | GO:0045039: protein import into mitochondrial inner membrane | 5.75E-04 |
| 29 | GO:0009072: aromatic amino acid family metabolic process | 5.75E-04 |
| 30 | GO:0048281: inflorescence morphogenesis | 5.75E-04 |
| 31 | GO:0008333: endosome to lysosome transport | 5.75E-04 |
| 32 | GO:0010359: regulation of anion channel activity | 5.75E-04 |
| 33 | GO:0010288: response to lead ion | 5.75E-04 |
| 34 | GO:0010351: lithium ion transport | 5.75E-04 |
| 35 | GO:0048194: Golgi vesicle budding | 8.23E-04 |
| 36 | GO:0006882: cellular zinc ion homeostasis | 8.23E-04 |
| 37 | GO:0001676: long-chain fatty acid metabolic process | 8.23E-04 |
| 38 | GO:0045727: positive regulation of translation | 1.09E-03 |
| 39 | GO:0051205: protein insertion into membrane | 1.09E-03 |
| 40 | GO:0010188: response to microbial phytotoxin | 1.09E-03 |
| 41 | GO:0006623: protein targeting to vacuole | 1.28E-03 |
| 42 | GO:0006461: protein complex assembly | 1.38E-03 |
| 43 | GO:0006564: L-serine biosynthetic process | 1.38E-03 |
| 44 | GO:0030163: protein catabolic process | 1.55E-03 |
| 45 | GO:0010405: arabinogalactan protein metabolic process | 1.70E-03 |
| 46 | GO:0006751: glutathione catabolic process | 1.70E-03 |
| 47 | GO:0043248: proteasome assembly | 1.70E-03 |
| 48 | GO:0070814: hydrogen sulfide biosynthetic process | 1.70E-03 |
| 49 | GO:0016554: cytidine to uridine editing | 1.70E-03 |
| 50 | GO:1902456: regulation of stomatal opening | 1.70E-03 |
| 51 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.70E-03 |
| 52 | GO:0009228: thiamine biosynthetic process | 1.70E-03 |
| 53 | GO:0035435: phosphate ion transmembrane transport | 1.70E-03 |
| 54 | GO:0009615: response to virus | 1.96E-03 |
| 55 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.03E-03 |
| 56 | GO:0050790: regulation of catalytic activity | 2.39E-03 |
| 57 | GO:0071446: cellular response to salicylic acid stimulus | 2.39E-03 |
| 58 | GO:1900056: negative regulation of leaf senescence | 2.39E-03 |
| 59 | GO:0030026: cellular manganese ion homeostasis | 2.39E-03 |
| 60 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.77E-03 |
| 61 | GO:0009819: drought recovery | 2.77E-03 |
| 62 | GO:0006605: protein targeting | 2.77E-03 |
| 63 | GO:2000070: regulation of response to water deprivation | 2.77E-03 |
| 64 | GO:0050821: protein stabilization | 2.77E-03 |
| 65 | GO:0009407: toxin catabolic process | 2.80E-03 |
| 66 | GO:0030968: endoplasmic reticulum unfolded protein response | 3.16E-03 |
| 67 | GO:0055114: oxidation-reduction process | 3.21E-03 |
| 68 | GO:0046685: response to arsenic-containing substance | 3.58E-03 |
| 69 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.58E-03 |
| 70 | GO:0009821: alkaloid biosynthetic process | 3.58E-03 |
| 71 | GO:0030042: actin filament depolymerization | 4.01E-03 |
| 72 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.01E-03 |
| 73 | GO:0035556: intracellular signal transduction | 4.30E-03 |
| 74 | GO:0055062: phosphate ion homeostasis | 4.46E-03 |
| 75 | GO:0000103: sulfate assimilation | 4.46E-03 |
| 76 | GO:0006032: chitin catabolic process | 4.46E-03 |
| 77 | GO:0043069: negative regulation of programmed cell death | 4.46E-03 |
| 78 | GO:0010072: primary shoot apical meristem specification | 4.92E-03 |
| 79 | GO:0072593: reactive oxygen species metabolic process | 4.92E-03 |
| 80 | GO:0000272: polysaccharide catabolic process | 4.92E-03 |
| 81 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.99E-03 |
| 82 | GO:0015706: nitrate transport | 5.41E-03 |
| 83 | GO:0006006: glucose metabolic process | 5.91E-03 |
| 84 | GO:0010053: root epidermal cell differentiation | 6.95E-03 |
| 85 | GO:0010167: response to nitrate | 6.95E-03 |
| 86 | GO:0070588: calcium ion transmembrane transport | 6.95E-03 |
| 87 | GO:0009863: salicylic acid mediated signaling pathway | 8.05E-03 |
| 88 | GO:2000377: regulation of reactive oxygen species metabolic process | 8.05E-03 |
| 89 | GO:0006874: cellular calcium ion homeostasis | 8.63E-03 |
| 90 | GO:0009753: response to jasmonic acid | 9.03E-03 |
| 91 | GO:0016998: cell wall macromolecule catabolic process | 9.22E-03 |
| 92 | GO:0009814: defense response, incompatible interaction | 9.82E-03 |
| 93 | GO:0007005: mitochondrion organization | 9.82E-03 |
| 94 | GO:0031348: negative regulation of defense response | 9.82E-03 |
| 95 | GO:0009625: response to insect | 1.04E-02 |
| 96 | GO:0006012: galactose metabolic process | 1.04E-02 |
| 97 | GO:0001944: vasculature development | 1.04E-02 |
| 98 | GO:0019722: calcium-mediated signaling | 1.11E-02 |
| 99 | GO:0042742: defense response to bacterium | 1.15E-02 |
| 100 | GO:0009790: embryo development | 1.16E-02 |
| 101 | GO:0006979: response to oxidative stress | 1.17E-02 |
| 102 | GO:0042147: retrograde transport, endosome to Golgi | 1.17E-02 |
| 103 | GO:0042631: cellular response to water deprivation | 1.24E-02 |
| 104 | GO:0010087: phloem or xylem histogenesis | 1.24E-02 |
| 105 | GO:0006520: cellular amino acid metabolic process | 1.31E-02 |
| 106 | GO:0006662: glycerol ether metabolic process | 1.31E-02 |
| 107 | GO:0006814: sodium ion transport | 1.37E-02 |
| 108 | GO:0042752: regulation of circadian rhythm | 1.37E-02 |
| 109 | GO:0009646: response to absence of light | 1.37E-02 |
| 110 | GO:0080156: mitochondrial mRNA modification | 1.52E-02 |
| 111 | GO:0010193: response to ozone | 1.52E-02 |
| 112 | GO:0000302: response to reactive oxygen species | 1.52E-02 |
| 113 | GO:0007264: small GTPase mediated signal transduction | 1.59E-02 |
| 114 | GO:0009738: abscisic acid-activated signaling pathway | 1.64E-02 |
| 115 | GO:0015031: protein transport | 1.66E-02 |
| 116 | GO:0006464: cellular protein modification process | 1.74E-02 |
| 117 | GO:0009611: response to wounding | 1.76E-02 |
| 118 | GO:0001666: response to hypoxia | 1.97E-02 |
| 119 | GO:0009607: response to biotic stimulus | 2.05E-02 |
| 120 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.05E-02 |
| 121 | GO:0009627: systemic acquired resistance | 2.13E-02 |
| 122 | GO:0042128: nitrate assimilation | 2.13E-02 |
| 123 | GO:0006952: defense response | 2.20E-02 |
| 124 | GO:0009860: pollen tube growth | 2.29E-02 |
| 125 | GO:0007049: cell cycle | 2.37E-02 |
| 126 | GO:0008219: cell death | 2.38E-02 |
| 127 | GO:0009723: response to ethylene | 2.46E-02 |
| 128 | GO:0009651: response to salt stress | 2.47E-02 |
| 129 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.52E-02 |
| 130 | GO:0010043: response to zinc ion | 2.64E-02 |
| 131 | GO:0010119: regulation of stomatal movement | 2.64E-02 |
| 132 | GO:0009867: jasmonic acid mediated signaling pathway | 2.81E-02 |
| 133 | GO:0046777: protein autophosphorylation | 2.82E-02 |
| 134 | GO:0034599: cellular response to oxidative stress | 2.90E-02 |
| 135 | GO:0006631: fatty acid metabolic process | 3.18E-02 |
| 136 | GO:0006886: intracellular protein transport | 3.26E-02 |
| 137 | GO:0000209: protein polyubiquitination | 3.47E-02 |
| 138 | GO:0009737: response to abscisic acid | 3.55E-02 |
| 139 | GO:0009644: response to high light intensity | 3.56E-02 |
| 140 | GO:0009636: response to toxic substance | 3.66E-02 |
| 141 | GO:0009751: response to salicylic acid | 3.83E-02 |
| 142 | GO:0009846: pollen germination | 3.96E-02 |
| 143 | GO:0006812: cation transport | 3.96E-02 |
| 144 | GO:0006364: rRNA processing | 4.17E-02 |
| 145 | GO:0006486: protein glycosylation | 4.17E-02 |
| 146 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.27E-02 |
| 147 | GO:0048367: shoot system development | 4.80E-02 |
| 148 | GO:0009873: ethylene-activated signaling pathway | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 2 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 3 | GO:0042134: rRNA primary transcript binding | 1.54E-04 |
| 4 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 1.54E-04 |
| 5 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.81E-04 |
| 6 | GO:0032791: lead ion binding | 3.51E-04 |
| 7 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.51E-04 |
| 8 | GO:0046593: mandelonitrile lyase activity | 3.51E-04 |
| 9 | GO:0001671: ATPase activator activity | 3.51E-04 |
| 10 | GO:0019172: glyoxalase III activity | 3.51E-04 |
| 11 | GO:0004061: arylformamidase activity | 3.51E-04 |
| 12 | GO:0004364: glutathione transferase activity | 4.68E-04 |
| 13 | GO:0052692: raffinose alpha-galactosidase activity | 5.75E-04 |
| 14 | GO:0008430: selenium binding | 5.75E-04 |
| 15 | GO:0004557: alpha-galactosidase activity | 5.75E-04 |
| 16 | GO:0050833: pyruvate transmembrane transporter activity | 5.75E-04 |
| 17 | GO:0003840: gamma-glutamyltransferase activity | 5.75E-04 |
| 18 | GO:0036374: glutathione hydrolase activity | 5.75E-04 |
| 19 | GO:0004781: sulfate adenylyltransferase (ATP) activity | 5.75E-04 |
| 20 | GO:0031176: endo-1,4-beta-xylanase activity | 8.23E-04 |
| 21 | GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity | 8.23E-04 |
| 22 | GO:0015368: calcium:cation antiporter activity | 1.09E-03 |
| 23 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.09E-03 |
| 24 | GO:0015369: calcium:proton antiporter activity | 1.09E-03 |
| 25 | GO:0000062: fatty-acyl-CoA binding | 1.09E-03 |
| 26 | GO:0004301: epoxide hydrolase activity | 1.09E-03 |
| 27 | GO:0015035: protein disulfide oxidoreductase activity | 1.15E-03 |
| 28 | GO:0031386: protein tag | 1.38E-03 |
| 29 | GO:0030976: thiamine pyrophosphate binding | 1.70E-03 |
| 30 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.70E-03 |
| 31 | GO:0031593: polyubiquitin binding | 1.70E-03 |
| 32 | GO:0051920: peroxiredoxin activity | 2.03E-03 |
| 33 | GO:0102391: decanoate--CoA ligase activity | 2.03E-03 |
| 34 | GO:0004012: phospholipid-translocating ATPase activity | 2.03E-03 |
| 35 | GO:0003978: UDP-glucose 4-epimerase activity | 2.03E-03 |
| 36 | GO:0004602: glutathione peroxidase activity | 2.03E-03 |
| 37 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.03E-03 |
| 38 | GO:0005515: protein binding | 2.18E-03 |
| 39 | GO:0016831: carboxy-lyase activity | 2.39E-03 |
| 40 | GO:0030515: snoRNA binding | 2.39E-03 |
| 41 | GO:0008320: protein transmembrane transporter activity | 2.39E-03 |
| 42 | GO:0043295: glutathione binding | 2.39E-03 |
| 43 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.39E-03 |
| 44 | GO:0016209: antioxidant activity | 2.77E-03 |
| 45 | GO:0015491: cation:cation antiporter activity | 2.77E-03 |
| 46 | GO:0050897: cobalt ion binding | 2.93E-03 |
| 47 | GO:0008135: translation factor activity, RNA binding | 3.16E-03 |
| 48 | GO:0003746: translation elongation factor activity | 3.21E-03 |
| 49 | GO:0016787: hydrolase activity | 3.48E-03 |
| 50 | GO:0004601: peroxidase activity | 3.83E-03 |
| 51 | GO:0016844: strictosidine synthase activity | 4.01E-03 |
| 52 | GO:0015112: nitrate transmembrane transporter activity | 4.01E-03 |
| 53 | GO:0004568: chitinase activity | 4.46E-03 |
| 54 | GO:0004713: protein tyrosine kinase activity | 4.46E-03 |
| 55 | GO:0005198: structural molecule activity | 4.64E-03 |
| 56 | GO:0008378: galactosyltransferase activity | 5.41E-03 |
| 57 | GO:0005388: calcium-transporting ATPase activity | 5.91E-03 |
| 58 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.91E-03 |
| 59 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.91E-03 |
| 60 | GO:0004190: aspartic-type endopeptidase activity | 6.95E-03 |
| 61 | GO:0008061: chitin binding | 6.95E-03 |
| 62 | GO:0005516: calmodulin binding | 7.36E-03 |
| 63 | GO:0031418: L-ascorbic acid binding | 8.05E-03 |
| 64 | GO:0005525: GTP binding | 8.43E-03 |
| 65 | GO:0051087: chaperone binding | 8.63E-03 |
| 66 | GO:0004298: threonine-type endopeptidase activity | 9.22E-03 |
| 67 | GO:0005509: calcium ion binding | 1.02E-02 |
| 68 | GO:0047134: protein-disulfide reductase activity | 1.17E-02 |
| 69 | GO:0004791: thioredoxin-disulfide reductase activity | 1.37E-02 |
| 70 | GO:0016887: ATPase activity | 1.44E-02 |
| 71 | GO:0004197: cysteine-type endopeptidase activity | 1.59E-02 |
| 72 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.66E-02 |
| 73 | GO:0042802: identical protein binding | 1.74E-02 |
| 74 | GO:0008237: metallopeptidase activity | 1.81E-02 |
| 75 | GO:0016597: amino acid binding | 1.89E-02 |
| 76 | GO:0005524: ATP binding | 1.99E-02 |
| 77 | GO:0004672: protein kinase activity | 2.05E-02 |
| 78 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.13E-02 |
| 79 | GO:0004683: calmodulin-dependent protein kinase activity | 2.21E-02 |
| 80 | GO:0043531: ADP binding | 2.33E-02 |
| 81 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.38E-02 |
| 82 | GO:0008233: peptidase activity | 2.59E-02 |
| 83 | GO:0061630: ubiquitin protein ligase activity | 2.77E-02 |
| 84 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.81E-02 |
| 85 | GO:0003697: single-stranded DNA binding | 2.81E-02 |
| 86 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.99E-02 |
| 87 | GO:0050661: NADP binding | 3.09E-02 |
| 88 | GO:0004871: signal transducer activity | 3.31E-02 |
| 89 | GO:0004722: protein serine/threonine phosphatase activity | 3.46E-02 |
| 90 | GO:0051287: NAD binding | 3.86E-02 |
| 91 | GO:0003924: GTPase activity | 3.89E-02 |
| 92 | GO:0009055: electron carrier activity | 4.16E-02 |
| 93 | GO:0016298: lipase activity | 4.27E-02 |
| 94 | GO:0031625: ubiquitin protein ligase binding | 4.48E-02 |
| 95 | GO:0008234: cysteine-type peptidase activity | 4.48E-02 |
| 96 | GO:0004674: protein serine/threonine kinase activity | 4.64E-02 |
| 97 | GO:0005215: transporter activity | 4.66E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0005829: cytosol | 1.24E-05 |
| 3 | GO:0005789: endoplasmic reticulum membrane | 1.10E-04 |
| 4 | GO:0005783: endoplasmic reticulum | 1.97E-04 |
| 5 | GO:0030134: ER to Golgi transport vesicle | 3.51E-04 |
| 6 | GO:0005794: Golgi apparatus | 5.57E-04 |
| 7 | GO:0030139: endocytic vesicle | 5.75E-04 |
| 8 | GO:0031461: cullin-RING ubiquitin ligase complex | 8.23E-04 |
| 9 | GO:0048046: apoplast | 1.04E-03 |
| 10 | GO:0005771: multivesicular body | 1.70E-03 |
| 11 | GO:0030904: retromer complex | 1.70E-03 |
| 12 | GO:0016363: nuclear matrix | 2.03E-03 |
| 13 | GO:0005801: cis-Golgi network | 2.03E-03 |
| 14 | GO:0016272: prefoldin complex | 2.03E-03 |
| 15 | GO:0000794: condensed nuclear chromosome | 2.39E-03 |
| 16 | GO:0005773: vacuole | 2.56E-03 |
| 17 | GO:0031305: integral component of mitochondrial inner membrane | 2.77E-03 |
| 18 | GO:0009514: glyoxysome | 3.16E-03 |
| 19 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.16E-03 |
| 20 | GO:0005819: spindle | 3.50E-03 |
| 21 | GO:0031902: late endosome membrane | 3.81E-03 |
| 22 | GO:0015030: Cajal body | 4.01E-03 |
| 23 | GO:0017119: Golgi transport complex | 4.46E-03 |
| 24 | GO:0008541: proteasome regulatory particle, lid subcomplex | 4.92E-03 |
| 25 | GO:0032040: small-subunit processome | 5.41E-03 |
| 26 | GO:0031307: integral component of mitochondrial outer membrane | 5.41E-03 |
| 27 | GO:0000502: proteasome complex | 5.56E-03 |
| 28 | GO:0019013: viral nucleocapsid | 5.91E-03 |
| 29 | GO:0005886: plasma membrane | 6.09E-03 |
| 30 | GO:0005764: lysosome | 6.42E-03 |
| 31 | GO:0005774: vacuolar membrane | 8.91E-03 |
| 32 | GO:0005839: proteasome core complex | 9.22E-03 |
| 33 | GO:0005622: intracellular | 9.47E-03 |
| 34 | GO:0005623: cell | 1.02E-02 |
| 35 | GO:0015629: actin cytoskeleton | 1.04E-02 |
| 36 | GO:0009524: phragmoplast | 1.05E-02 |
| 37 | GO:0005778: peroxisomal membrane | 1.81E-02 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 1.97E-02 |
| 39 | GO:0000151: ubiquitin ligase complex | 2.38E-02 |
| 40 | GO:0005802: trans-Golgi network | 3.09E-02 |
| 41 | GO:0005768: endosome | 3.62E-02 |
| 42 | GO:0043231: intracellular membrane-bounded organelle | 4.28E-02 |
| 43 | GO:0005635: nuclear envelope | 4.37E-02 |
| 44 | GO:0009506: plasmodesma | 4.83E-02 |
| 45 | GO:0005834: heterotrimeric G-protein complex | 4.91E-02 |