Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G45910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000188: inactivation of MAPK activity0.00E+00
2GO:0010398: xylogalacturonan metabolic process0.00E+00
3GO:0032780: negative regulation of ATPase activity0.00E+00
4GO:0010111: glyoxysome organization0.00E+00
5GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
6GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
7GO:0010360: negative regulation of anion channel activity0.00E+00
8GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
9GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
10GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
11GO:0007141: male meiosis I0.00E+00
12GO:0010793: regulation of mRNA export from nucleus0.00E+00
13GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
14GO:0048232: male gamete generation6.73E-05
15GO:0006014: D-ribose metabolic process6.73E-05
16GO:0016559: peroxisome fission1.59E-04
17GO:0098721: uracil import across plasma membrane1.95E-04
18GO:0098702: adenine import across plasma membrane1.95E-04
19GO:0043609: regulation of carbon utilization1.95E-04
20GO:1903648: positive regulation of chlorophyll catabolic process1.95E-04
21GO:0035266: meristem growth1.95E-04
22GO:0098710: guanine import across plasma membrane1.95E-04
23GO:0048363: mucilage pectin metabolic process1.95E-04
24GO:0007292: female gamete generation1.95E-04
25GO:0015760: glucose-6-phosphate transport1.95E-04
26GO:0035344: hypoxanthine transport1.95E-04
27GO:1902361: mitochondrial pyruvate transmembrane transport1.95E-04
28GO:0010265: SCF complex assembly1.95E-04
29GO:0030968: endoplasmic reticulum unfolded protein response1.98E-04
30GO:0019441: tryptophan catabolic process to kynurenine4.38E-04
31GO:0019395: fatty acid oxidation4.38E-04
32GO:0031538: negative regulation of anthocyanin metabolic process4.38E-04
33GO:0050684: regulation of mRNA processing4.38E-04
34GO:0009727: detection of ethylene stimulus4.38E-04
35GO:0009915: phloem sucrose loading4.38E-04
36GO:0006672: ceramide metabolic process4.38E-04
37GO:0006850: mitochondrial pyruvate transport4.38E-04
38GO:0051788: response to misfolded protein4.38E-04
39GO:0015712: hexose phosphate transport4.38E-04
40GO:0051258: protein polymerization4.38E-04
41GO:0000266: mitochondrial fission4.48E-04
42GO:0051176: positive regulation of sulfur metabolic process7.14E-04
43GO:0010476: gibberellin mediated signaling pathway7.14E-04
44GO:0010325: raffinose family oligosaccharide biosynthetic process7.14E-04
45GO:0009410: response to xenobiotic stimulus7.14E-04
46GO:0060968: regulation of gene silencing7.14E-04
47GO:0015714: phosphoenolpyruvate transport7.14E-04
48GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening7.14E-04
49GO:0032784: regulation of DNA-templated transcription, elongation7.14E-04
50GO:0010359: regulation of anion channel activity7.14E-04
51GO:0061158: 3'-UTR-mediated mRNA destabilization7.14E-04
52GO:0035436: triose phosphate transmembrane transport7.14E-04
53GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process9.47E-04
54GO:0031408: oxylipin biosynthetic process9.50E-04
55GO:0006986: response to unfolded protein1.02E-03
56GO:0001676: long-chain fatty acid metabolic process1.02E-03
57GO:0010116: positive regulation of abscisic acid biosynthetic process1.02E-03
58GO:2001289: lipid X metabolic process1.02E-03
59GO:0072334: UDP-galactose transmembrane transport1.02E-03
60GO:0071329: cellular response to sucrose stimulus1.02E-03
61GO:0080001: mucilage extrusion from seed coat1.02E-03
62GO:0043967: histone H4 acetylation1.02E-03
63GO:0007005: mitochondrion organization1.04E-03
64GO:0010109: regulation of photosynthesis1.35E-03
65GO:0033320: UDP-D-xylose biosynthetic process1.35E-03
66GO:0009939: positive regulation of gibberellic acid mediated signaling pathway1.35E-03
67GO:0045727: positive regulation of translation1.35E-03
68GO:0042991: transcription factor import into nucleus1.35E-03
69GO:0015713: phosphoglycerate transport1.35E-03
70GO:0010225: response to UV-C1.72E-03
71GO:0046283: anthocyanin-containing compound metabolic process1.72E-03
72GO:0019252: starch biosynthetic process1.76E-03
73GO:0006635: fatty acid beta-oxidation1.89E-03
74GO:0007264: small GTPase mediated signal transduction2.01E-03
75GO:0009737: response to abscisic acid2.11E-03
76GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.12E-03
77GO:0048827: phyllome development2.12E-03
78GO:0043248: proteasome assembly2.12E-03
79GO:0070814: hydrogen sulfide biosynthetic process2.12E-03
80GO:0042732: D-xylose metabolic process2.12E-03
81GO:1902456: regulation of stomatal opening2.12E-03
82GO:0006796: phosphate-containing compound metabolic process2.12E-03
83GO:0009643: photosynthetic acclimation2.12E-03
84GO:0006914: autophagy2.28E-03
85GO:0010189: vitamin E biosynthetic process2.54E-03
86GO:0048444: floral organ morphogenesis2.54E-03
87GO:0043966: histone H3 acetylation2.54E-03
88GO:0048280: vesicle fusion with Golgi apparatus2.54E-03
89GO:1902074: response to salt3.00E-03
90GO:0050790: regulation of catalytic activity3.00E-03
91GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.00E-03
92GO:0006368: transcription elongation from RNA polymerase II promoter3.00E-03
93GO:0009395: phospholipid catabolic process3.00E-03
94GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.00E-03
95GO:1900057: positive regulation of leaf senescence3.00E-03
96GO:0006333: chromatin assembly or disassembly3.00E-03
97GO:0010150: leaf senescence3.36E-03
98GO:2000070: regulation of response to water deprivation3.47E-03
99GO:0010928: regulation of auxin mediated signaling pathway3.47E-03
100GO:0035265: organ growth3.47E-03
101GO:0009819: drought recovery3.47E-03
102GO:0006605: protein targeting3.47E-03
103GO:0010078: maintenance of root meristem identity3.47E-03
104GO:0006499: N-terminal protein myristoylation3.89E-03
105GO:0009827: plant-type cell wall modification3.97E-03
106GO:0009056: catabolic process4.49E-03
107GO:0009821: alkaloid biosynthetic process4.49E-03
108GO:2000024: regulation of leaf development4.49E-03
109GO:0008202: steroid metabolic process5.04E-03
110GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.04E-03
111GO:0043069: negative regulation of programmed cell death5.61E-03
112GO:0048829: root cap development5.61E-03
113GO:0010629: negative regulation of gene expression5.61E-03
114GO:0006896: Golgi to vacuole transport5.61E-03
115GO:0051026: chiasma assembly5.61E-03
116GO:0000103: sulfate assimilation5.61E-03
117GO:0051707: response to other organism5.76E-03
118GO:0000209: protein polyubiquitination5.99E-03
119GO:0010015: root morphogenesis6.20E-03
120GO:0009738: abscisic acid-activated signaling pathway6.27E-03
121GO:0006970: response to osmotic stress6.43E-03
122GO:0010105: negative regulation of ethylene-activated signaling pathway6.81E-03
123GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process7.44E-03
124GO:0010200: response to chitin8.04E-03
125GO:0009266: response to temperature stimulus8.10E-03
126GO:0009933: meristem structural organization8.10E-03
127GO:0090351: seedling development8.77E-03
128GO:0009225: nucleotide-sugar metabolic process8.77E-03
129GO:0034976: response to endoplasmic reticulum stress9.46E-03
130GO:0006636: unsaturated fatty acid biosynthetic process9.46E-03
131GO:0009863: salicylic acid mediated signaling pathway1.02E-02
132GO:0009695: jasmonic acid biosynthetic process1.09E-02
133GO:0005975: carbohydrate metabolic process1.13E-02
134GO:0080092: regulation of pollen tube growth1.24E-02
135GO:0009814: defense response, incompatible interaction1.24E-02
136GO:0016226: iron-sulfur cluster assembly1.24E-02
137GO:0007131: reciprocal meiotic recombination1.24E-02
138GO:0035428: hexose transmembrane transport1.24E-02
139GO:0030433: ubiquitin-dependent ERAD pathway1.24E-02
140GO:0009408: response to heat1.26E-02
141GO:0071369: cellular response to ethylene stimulus1.32E-02
142GO:0006012: galactose metabolic process1.32E-02
143GO:0006817: phosphate ion transport1.40E-02
144GO:0008152: metabolic process1.43E-02
145GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.48E-02
146GO:0008284: positive regulation of cell proliferation1.48E-02
147GO:0042147: retrograde transport, endosome to Golgi1.48E-02
148GO:0010087: phloem or xylem histogenesis1.57E-02
149GO:0046323: glucose import1.65E-02
150GO:0045489: pectin biosynthetic process1.65E-02
151GO:0042752: regulation of circadian rhythm1.74E-02
152GO:0009873: ethylene-activated signaling pathway1.75E-02
153GO:0006623: protein targeting to vacuole1.83E-02
154GO:0010183: pollen tube guidance1.83E-02
155GO:0048825: cotyledon development1.83E-02
156GO:0009749: response to glucose1.83E-02
157GO:0042742: defense response to bacterium1.91E-02
158GO:0071554: cell wall organization or biogenesis1.92E-02
159GO:0000302: response to reactive oxygen species1.92E-02
160GO:0006891: intra-Golgi vesicle-mediated transport1.92E-02
161GO:0009630: gravitropism2.01E-02
162GO:1901657: glycosyl compound metabolic process2.11E-02
163GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.15E-02
164GO:0009739: response to gibberellin2.15E-02
165GO:0006310: DNA recombination2.20E-02
166GO:0006904: vesicle docking involved in exocytosis2.30E-02
167GO:0009793: embryo development ending in seed dormancy2.33E-02
168GO:0051607: defense response to virus2.40E-02
169GO:0009615: response to virus2.50E-02
170GO:0010029: regulation of seed germination2.60E-02
171GO:0009816: defense response to bacterium, incompatible interaction2.60E-02
172GO:0035556: intracellular signal transduction2.79E-02
173GO:0006888: ER to Golgi vesicle-mediated transport2.80E-02
174GO:0010311: lateral root formation3.12E-02
175GO:0009860: pollen tube growth3.20E-02
176GO:0006468: protein phosphorylation3.27E-02
177GO:0010119: regulation of stomatal movement3.34E-02
178GO:0009723: response to ethylene3.43E-02
179GO:0048366: leaf development3.49E-02
180GO:0009867: jasmonic acid mediated signaling pathway3.57E-02
181GO:0045087: innate immune response3.57E-02
182GO:0016051: carbohydrate biosynthetic process3.57E-02
183GO:0046686: response to cadmium ion3.67E-02
184GO:0046777: protein autophosphorylation3.93E-02
185GO:0006887: exocytosis4.03E-02
186GO:0006631: fatty acid metabolic process4.03E-02
187GO:0009744: response to sucrose4.27E-02
188GO:0008283: cell proliferation4.27E-02
189GO:0009651: response to salt stress4.30E-02
190GO:0045454: cell redox homeostasis4.39E-02
191GO:0009965: leaf morphogenesis4.64E-02
192GO:0031347: regulation of defense response4.89E-02
193GO:0006260: DNA replication4.89E-02
RankGO TermAdjusted P value
1GO:0042030: ATPase inhibitor activity0.00E+00
2GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
3GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity0.00E+00
4GO:0052642: lysophosphatidic acid phosphatase activity0.00E+00
5GO:0010176: homogentisate phytyltransferase activity0.00E+00
6GO:0004747: ribokinase activity9.36E-05
7GO:0008865: fructokinase activity1.59E-04
8GO:0015208: guanine transmembrane transporter activity1.95E-04
9GO:0015294: solute:cation symporter activity1.95E-04
10GO:0015207: adenine transmembrane transporter activity1.95E-04
11GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity1.95E-04
12GO:0010331: gibberellin binding4.38E-04
13GO:0015152: glucose-6-phosphate transmembrane transporter activity4.38E-04
14GO:0004061: arylformamidase activity4.38E-04
15GO:0003988: acetyl-CoA C-acyltransferase activity4.38E-04
16GO:0005315: inorganic phosphate transmembrane transporter activity5.09E-04
17GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism5.09E-04
18GO:0004781: sulfate adenylyltransferase (ATP) activity7.14E-04
19GO:0071917: triose-phosphate transmembrane transporter activity7.14E-04
20GO:0052692: raffinose alpha-galactosidase activity7.14E-04
21GO:0005047: signal recognition particle binding7.14E-04
22GO:0000975: regulatory region DNA binding7.14E-04
23GO:0004557: alpha-galactosidase activity7.14E-04
24GO:0050833: pyruvate transmembrane transporter activity7.14E-04
25GO:0005515: protein binding7.60E-04
26GO:0004300: enoyl-CoA hydratase activity1.02E-03
27GO:0030527: structural constituent of chromatin1.02E-03
28GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.02E-03
29GO:0004301: epoxide hydrolase activity1.35E-03
30GO:0015120: phosphoglycerate transmembrane transporter activity1.35E-03
31GO:0004659: prenyltransferase activity1.35E-03
32GO:0015210: uracil transmembrane transporter activity1.35E-03
33GO:0000993: RNA polymerase II core binding1.35E-03
34GO:0016301: kinase activity1.41E-03
35GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.72E-03
36GO:0005459: UDP-galactose transmembrane transporter activity1.72E-03
37GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.72E-03
38GO:0048040: UDP-glucuronate decarboxylase activity2.12E-03
39GO:0031593: polyubiquitin binding2.12E-03
40GO:0004556: alpha-amylase activity2.12E-03
41GO:0035252: UDP-xylosyltransferase activity2.12E-03
42GO:0036402: proteasome-activating ATPase activity2.12E-03
43GO:0070403: NAD+ binding2.54E-03
44GO:0004012: phospholipid-translocating ATPase activity2.54E-03
45GO:0003978: UDP-glucose 4-epimerase activity2.54E-03
46GO:0051213: dioxygenase activity2.71E-03
47GO:0102425: myricetin 3-O-glucosyltransferase activity3.00E-03
48GO:0102360: daphnetin 3-O-glucosyltransferase activity3.00E-03
49GO:0047893: flavonol 3-O-glucosyltransferase activity3.47E-03
50GO:0008142: oxysterol binding3.97E-03
51GO:0071949: FAD binding4.49E-03
52GO:0003993: acid phosphatase activity4.67E-03
53GO:0030955: potassium ion binding5.04E-03
54GO:0016844: strictosidine synthase activity5.04E-03
55GO:0004743: pyruvate kinase activity5.04E-03
56GO:0008047: enzyme activator activity5.61E-03
57GO:0000287: magnesium ion binding5.72E-03
58GO:0008794: arsenate reductase (glutaredoxin) activity6.20E-03
59GO:0004521: endoribonuclease activity6.81E-03
60GO:0015114: phosphate ion transmembrane transporter activity7.44E-03
61GO:0005388: calcium-transporting ATPase activity7.44E-03
62GO:0000175: 3'-5'-exoribonuclease activity7.44E-03
63GO:0031624: ubiquitin conjugating enzyme binding8.10E-03
64GO:0004535: poly(A)-specific ribonuclease activity8.10E-03
65GO:0061630: ubiquitin protein ligase activity8.21E-03
66GO:0008234: cysteine-type peptidase activity8.59E-03
67GO:0017025: TBP-class protein binding8.77E-03
68GO:0004725: protein tyrosine phosphatase activity9.46E-03
69GO:0043130: ubiquitin binding1.02E-02
70GO:0005524: ATP binding1.04E-02
71GO:0043424: protein histidine kinase binding1.09E-02
72GO:0008408: 3'-5' exonuclease activity1.17E-02
73GO:0035251: UDP-glucosyltransferase activity1.17E-02
74GO:0004540: ribonuclease activity1.17E-02
75GO:0003924: GTPase activity1.26E-02
76GO:0004674: protein serine/threonine kinase activity1.29E-02
77GO:0022891: substrate-specific transmembrane transporter activity1.32E-02
78GO:0003727: single-stranded RNA binding1.40E-02
79GO:0005525: GTP binding1.40E-02
80GO:0047134: protein-disulfide reductase activity1.48E-02
81GO:0004402: histone acetyltransferase activity1.57E-02
82GO:0015144: carbohydrate transmembrane transporter activity1.66E-02
83GO:0004791: thioredoxin-disulfide reductase activity1.74E-02
84GO:0005355: glucose transmembrane transporter activity1.74E-02
85GO:0004872: receptor activity1.83E-02
86GO:0005351: sugar:proton symporter activity1.87E-02
87GO:0004197: cysteine-type endopeptidase activity2.01E-02
88GO:0003824: catalytic activity2.19E-02
89GO:0008483: transaminase activity2.30E-02
90GO:0016413: O-acetyltransferase activity2.40E-02
91GO:0016597: amino acid binding2.40E-02
92GO:0009931: calcium-dependent protein serine/threonine kinase activity2.70E-02
93GO:0004683: calmodulin-dependent protein kinase activity2.80E-02
94GO:0102483: scopolin beta-glucosidase activity2.80E-02
95GO:0004806: triglyceride lipase activity2.80E-02
96GO:0016788: hydrolase activity, acting on ester bonds3.03E-02
97GO:0043565: sequence-specific DNA binding3.53E-02
98GO:0003746: translation elongation factor activity3.57E-02
99GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.57E-02
100GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.68E-02
101GO:0004497: monooxygenase activity3.68E-02
102GO:0000149: SNARE binding3.80E-02
103GO:0004712: protein serine/threonine/tyrosine kinase activity3.80E-02
104GO:0008422: beta-glucosidase activity3.80E-02
105GO:0004364: glutathione transferase activity4.15E-02
106GO:0005484: SNAP receptor activity4.27E-02
107GO:0005516: calmodulin binding4.32E-02
108GO:0015293: symporter activity4.64E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0045335: phagocytic vesicle0.00E+00
3GO:0005773: vacuole3.10E-06
4GO:0030014: CCR4-NOT complex1.95E-04
5GO:0008023: transcription elongation factor complex1.95E-04
6GO:0005778: peroxisomal membrane2.41E-04
7GO:0005783: endoplasmic reticulum5.90E-04
8GO:0042406: extrinsic component of endoplasmic reticulum membrane7.14E-04
9GO:0005741: mitochondrial outer membrane9.50E-04
10GO:0070062: extracellular exosome1.02E-03
11GO:0031461: cullin-RING ubiquitin ligase complex1.02E-03
12GO:0033588: Elongator holoenzyme complex1.02E-03
13GO:0000323: lytic vacuole1.02E-03
14GO:0005829: cytosol1.32E-03
15GO:0005777: peroxisome2.02E-03
16GO:0030140: trans-Golgi network transport vesicle2.12E-03
17GO:0031597: cytosolic proteasome complex2.54E-03
18GO:0030173: integral component of Golgi membrane2.54E-03
19GO:0000794: condensed nuclear chromosome3.00E-03
20GO:0031595: nuclear proteasome complex3.00E-03
21GO:0000123: histone acetyltransferase complex3.00E-03
22GO:0031305: integral component of mitochondrial inner membrane3.47E-03
23GO:0012507: ER to Golgi transport vesicle membrane3.47E-03
24GO:0000151: ubiquitin ligase complex3.53E-03
25GO:0009514: glyoxysome3.97E-03
26GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.97E-03
27GO:0005794: Golgi apparatus4.04E-03
28GO:0016604: nuclear body5.04E-03
29GO:0008540: proteasome regulatory particle, base subcomplex5.04E-03
30GO:0031902: late endosome membrane5.31E-03
31GO:0048471: perinuclear region of cytoplasm6.20E-03
32GO:0031307: integral component of mitochondrial outer membrane6.81E-03
33GO:0016602: CCAAT-binding factor complex7.44E-03
34GO:0005764: lysosome8.10E-03
35GO:0030176: integral component of endoplasmic reticulum membrane8.77E-03
36GO:0005802: trans-Golgi network1.34E-02
37GO:0000790: nuclear chromatin1.48E-02
38GO:0005770: late endosome1.65E-02
39GO:0005886: plasma membrane1.92E-02
40GO:0000145: exocyst2.01E-02
41GO:0000785: chromatin2.01E-02
42GO:0000325: plant-type vacuole3.34E-02
43GO:0005789: endoplasmic reticulum membrane3.56E-02
44GO:0031969: chloroplast membrane3.68E-02
45GO:0005819: spindle3.80E-02
46GO:0031201: SNARE complex4.03E-02
47GO:0016020: membrane4.93E-02
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Gene type



Gene DE type