Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G45270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045176: apical protein localization0.00E+00
2GO:0006429: leucyl-tRNA aminoacylation0.00E+00
3GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
4GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
5GO:0010027: thylakoid membrane organization7.22E-06
6GO:0009773: photosynthetic electron transport in photosystem I2.85E-05
7GO:0042371: vitamin K biosynthetic process3.25E-05
8GO:1902458: positive regulation of stomatal opening3.25E-05
9GO:0071588: hydrogen peroxide mediated signaling pathway3.25E-05
10GO:1903426: regulation of reactive oxygen species biosynthetic process8.18E-05
11GO:0030388: fructose 1,6-bisphosphate metabolic process8.18E-05
12GO:0034755: iron ion transmembrane transport8.18E-05
13GO:0009306: protein secretion1.12E-04
14GO:0006518: peptide metabolic process1.42E-04
15GO:0006000: fructose metabolic process1.42E-04
16GO:1901332: negative regulation of lateral root development2.11E-04
17GO:0045727: positive regulation of translation2.85E-04
18GO:0032543: mitochondrial translation3.65E-04
19GO:0010236: plastoquinone biosynthetic process3.65E-04
20GO:0045038: protein import into chloroplast thylakoid membrane3.65E-04
21GO:0048827: phyllome development4.48E-04
22GO:0016554: cytidine to uridine editing4.48E-04
23GO:0042372: phylloquinone biosynthetic process5.36E-04
24GO:0010019: chloroplast-nucleus signaling pathway5.36E-04
25GO:0009772: photosynthetic electron transport in photosystem II6.27E-04
26GO:0006605: protein targeting7.22E-04
27GO:2000070: regulation of response to water deprivation7.22E-04
28GO:0032544: plastid translation8.20E-04
29GO:0017004: cytochrome complex assembly8.20E-04
30GO:0006002: fructose 6-phosphate metabolic process8.20E-04
31GO:0015996: chlorophyll catabolic process8.20E-04
32GO:0007186: G-protein coupled receptor signaling pathway8.20E-04
33GO:0006779: porphyrin-containing compound biosynthetic process1.02E-03
34GO:1900865: chloroplast RNA modification1.02E-03
35GO:0009735: response to cytokinin1.12E-03
36GO:0006782: protoporphyrinogen IX biosynthetic process1.13E-03
37GO:0006879: cellular iron ion homeostasis1.24E-03
38GO:0045037: protein import into chloroplast stroma1.36E-03
39GO:0010229: inflorescence development1.47E-03
40GO:0006094: gluconeogenesis1.47E-03
41GO:0005986: sucrose biosynthetic process1.47E-03
42GO:0010102: lateral root morphogenesis1.47E-03
43GO:0010207: photosystem II assembly1.60E-03
44GO:0010540: basipetal auxin transport1.60E-03
45GO:0019253: reductive pentose-phosphate cycle1.60E-03
46GO:0005985: sucrose metabolic process1.72E-03
47GO:0010025: wax biosynthetic process1.85E-03
48GO:0006418: tRNA aminoacylation for protein translation2.12E-03
49GO:0061077: chaperone-mediated protein folding2.26E-03
50GO:0010182: sugar mediated signaling pathway3.15E-03
51GO:0048825: cotyledon development3.47E-03
52GO:0000302: response to reactive oxygen species3.63E-03
53GO:0015979: photosynthesis3.83E-03
54GO:0006869: lipid transport4.40E-03
55GO:0009911: positive regulation of flower development4.67E-03
56GO:0015995: chlorophyll biosynthetic process5.22E-03
57GO:0010311: lateral root formation5.80E-03
58GO:0009631: cold acclimation6.19E-03
59GO:0034599: cellular response to oxidative stress6.80E-03
60GO:0006364: rRNA processing9.69E-03
61GO:0006813: potassium ion transport9.69E-03
62GO:0042744: hydrogen peroxide catabolic process1.60E-02
63GO:0009733: response to auxin2.00E-02
64GO:0006412: translation2.44E-02
65GO:0042254: ribosome biogenesis2.53E-02
66GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.98E-02
67GO:0045892: negative regulation of transcription, DNA-templated3.34E-02
68GO:0016042: lipid catabolic process3.76E-02
69GO:0009793: embryo development ending in seed dormancy4.11E-02
70GO:0009734: auxin-activated signaling pathway4.90E-02
RankGO TermAdjusted P value
1GO:0004823: leucine-tRNA ligase activity0.00E+00
2GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
3GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
4GO:0070006: metalloaminopeptidase activity3.25E-05
5GO:0004163: diphosphomevalonate decarboxylase activity3.25E-05
6GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.25E-05
7GO:0005528: FK506 binding6.68E-05
8GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity8.18E-05
9GO:0002161: aminoacyl-tRNA editing activity1.42E-04
10GO:0004659: prenyltransferase activity2.85E-04
11GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.49E-04
12GO:0004040: amidase activity3.65E-04
13GO:0004222: metalloendopeptidase activity3.85E-04
14GO:0016688: L-ascorbate peroxidase activity4.48E-04
15GO:0004130: cytochrome-c peroxidase activity4.48E-04
16GO:0003755: peptidyl-prolyl cis-trans isomerase activity6.55E-04
17GO:0005381: iron ion transmembrane transporter activity1.02E-03
18GO:0004177: aminopeptidase activity1.24E-03
19GO:0019843: rRNA binding1.30E-03
20GO:0008266: poly(U) RNA binding1.60E-03
21GO:0008324: cation transmembrane transporter activity2.12E-03
22GO:0016788: hydrolase activity, acting on ester bonds2.77E-03
23GO:0004812: aminoacyl-tRNA ligase activity2.84E-03
24GO:0050662: coenzyme binding3.31E-03
25GO:0004518: nuclease activity3.80E-03
26GO:0008237: metallopeptidase activity4.32E-03
27GO:0003729: mRNA binding5.00E-03
28GO:0005215: transporter activity1.97E-02
29GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.17E-02
30GO:0052689: carboxylic ester hydrolase activity3.12E-02
31GO:0004871: signal transducer activity3.42E-02
32GO:0003735: structural constituent of ribosome3.54E-02
33GO:0004519: endonuclease activity4.08E-02
34GO:0008289: lipid binding4.85E-02
35GO:0005515: protein binding4.91E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.43E-15
2GO:0009535: chloroplast thylakoid membrane8.87E-13
3GO:0009941: chloroplast envelope3.08E-07
4GO:0009534: chloroplast thylakoid9.79E-07
5GO:0009570: chloroplast stroma1.23E-06
6GO:0009543: chloroplast thylakoid lumen3.55E-06
7GO:0009579: thylakoid1.82E-05
8GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex3.25E-05
9GO:0009528: plastid inner membrane1.42E-04
10GO:0010319: stromule2.37E-04
11GO:0009527: plastid outer membrane2.85E-04
12GO:0031977: thylakoid lumen5.22E-04
13GO:0016021: integral component of membrane6.93E-04
14GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)9.20E-04
15GO:0009654: photosystem II oxygen evolving complex2.12E-03
16GO:0009532: plastid stroma2.26E-03
17GO:0005770: late endosome3.15E-03
18GO:0031969: chloroplast membrane3.36E-03
19GO:0019898: extrinsic component of membrane3.47E-03
20GO:0009707: chloroplast outer membrane5.60E-03
21GO:0010287: plastoglobule1.40E-02
22GO:0005840: ribosome1.86E-02
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Gene type



Gene DE type