Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G45190

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901918: negative regulation of exoribonuclease activity0.00E+00
2GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
3GO:0000476: maturation of 4.5S rRNA1.67E-05
4GO:0000967: rRNA 5'-end processing1.67E-05
5GO:0046467: membrane lipid biosynthetic process1.67E-05
6GO:0043266: regulation of potassium ion transport1.67E-05
7GO:2000021: regulation of ion homeostasis1.67E-05
8GO:0034470: ncRNA processing4.35E-05
9GO:0009405: pathogenesis7.77E-05
10GO:0015995: chlorophyll biosynthetic process1.33E-04
11GO:0016120: carotene biosynthetic process2.09E-04
12GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.59E-04
13GO:0009228: thiamine biosynthetic process2.59E-04
14GO:0010019: chloroplast-nucleus signaling pathway3.11E-04
15GO:1900057: positive regulation of leaf senescence3.66E-04
16GO:0010444: guard mother cell differentiation3.66E-04
17GO:0009657: plastid organization4.82E-04
18GO:0043085: positive regulation of catalytic activity7.34E-04
19GO:1903507: negative regulation of nucleic acid-templated transcription7.34E-04
20GO:0010588: cotyledon vascular tissue pattern formation8.70E-04
21GO:0010207: photosystem II assembly9.39E-04
22GO:0010030: positive regulation of seed germination1.01E-03
23GO:0016114: terpenoid biosynthetic process1.31E-03
24GO:2000022: regulation of jasmonic acid mediated signaling pathway1.39E-03
25GO:0035428: hexose transmembrane transport1.39E-03
26GO:0042127: regulation of cell proliferation1.56E-03
27GO:0016117: carotenoid biosynthetic process1.64E-03
28GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.64E-03
29GO:0080022: primary root development1.73E-03
30GO:0010087: phloem or xylem histogenesis1.73E-03
31GO:0042631: cellular response to water deprivation1.73E-03
32GO:0046323: glucose import1.82E-03
33GO:0009741: response to brassinosteroid1.82E-03
34GO:0010305: leaf vascular tissue pattern formation1.82E-03
35GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.09E-03
36GO:0009416: response to light stimulus3.83E-03
37GO:0034599: cellular response to oxidative stress3.87E-03
38GO:0010114: response to red light4.47E-03
39GO:0009640: photomorphogenesis4.47E-03
40GO:0031347: regulation of defense response5.09E-03
41GO:0009664: plant-type cell wall organization5.22E-03
42GO:0042538: hyperosmotic salinity response5.22E-03
43GO:0006417: regulation of translation5.88E-03
44GO:0048367: shoot system development6.28E-03
45GO:0048316: seed development6.28E-03
46GO:0009740: gibberellic acid mediated signaling pathway6.70E-03
47GO:0006396: RNA processing7.13E-03
48GO:0051726: regulation of cell cycle7.28E-03
49GO:0009742: brassinosteroid mediated signaling pathway7.28E-03
50GO:0006413: translational initiation9.74E-03
51GO:0040008: regulation of growth9.91E-03
52GO:0007623: circadian rhythm1.02E-02
53GO:0009826: unidimensional cell growth1.36E-02
54GO:0007049: cell cycle1.51E-02
55GO:0007275: multicellular organism development1.53E-02
56GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.66E-02
57GO:0006397: mRNA processing2.21E-02
58GO:0055114: oxidation-reduction process2.39E-02
59GO:0009734: auxin-activated signaling pathway2.73E-02
60GO:0009611: response to wounding3.27E-02
61GO:0051301: cell division3.42E-02
RankGO TermAdjusted P value
1GO:0045436: lycopene beta cyclase activity0.00E+00
2GO:0046906: tetrapyrrole binding1.67E-05
3GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity4.35E-05
4GO:0090729: toxin activity7.77E-05
5GO:0019899: enzyme binding3.66E-04
6GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen6.07E-04
7GO:0003714: transcription corepressor activity1.16E-03
8GO:0003727: single-stranded RNA binding1.56E-03
9GO:0001085: RNA polymerase II transcription factor binding1.82E-03
10GO:0005355: glucose transmembrane transporter activity1.91E-03
11GO:0005096: GTPase activator activity3.31E-03
12GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.42E-03
13GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.53E-03
14GO:0043621: protein self-association4.71E-03
15GO:0005515: protein binding7.86E-03
16GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding8.94E-03
17GO:0015144: carbohydrate transmembrane transporter activity9.26E-03
18GO:0005351: sugar:proton symporter activity1.01E-02
19GO:0042802: identical protein binding1.21E-02
20GO:0003682: chromatin binding1.45E-02
21GO:0004497: monooxygenase activity1.62E-02
22GO:0004871: signal transducer activity1.91E-02
23GO:0009055: electron carrier activity2.25E-02
24GO:0005507: copper ion binding4.14E-02
25GO:0019825: oxygen binding4.14E-02
26GO:0005516: calmodulin binding4.31E-02
RankGO TermAdjusted P value
1GO:0009531: secondary cell wall1.17E-04
2GO:0008180: COP9 signalosome5.42E-04
3GO:0031969: chloroplast membrane1.49E-03
4GO:0005667: transcription factor complex2.88E-03
5GO:0019005: SCF ubiquitin ligase complex3.20E-03
6GO:0031977: thylakoid lumen4.23E-03
7GO:0000502: proteasome complex5.48E-03
8GO:0009507: chloroplast5.50E-03
9GO:0009941: chloroplast envelope7.41E-03
10GO:0009543: chloroplast thylakoid lumen8.17E-03
11GO:0009705: plant-type vacuole membrane1.02E-02
12GO:0009570: chloroplast stroma1.13E-02
13GO:0009579: thylakoid3.66E-02
14GO:0005768: endosome4.94E-02
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Gene type



Gene DE type