GO Enrichment Analysis of Co-expressed Genes with
AT2G44650
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 3 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 5 | GO:0006223: uracil salvage | 0.00E+00 |
| 6 | GO:0042493: response to drug | 0.00E+00 |
| 7 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 8 | GO:0006412: translation | 3.36E-16 |
| 9 | GO:0009735: response to cytokinin | 1.68E-11 |
| 10 | GO:0042254: ribosome biogenesis | 3.35E-10 |
| 11 | GO:0015979: photosynthesis | 1.71E-09 |
| 12 | GO:0090391: granum assembly | 1.09E-08 |
| 13 | GO:0032544: plastid translation | 3.99E-08 |
| 14 | GO:0015995: chlorophyll biosynthetic process | 2.72E-05 |
| 15 | GO:0010207: photosystem II assembly | 2.78E-05 |
| 16 | GO:0010236: plastoquinone biosynthetic process | 4.91E-05 |
| 17 | GO:0006633: fatty acid biosynthetic process | 7.09E-05 |
| 18 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 8.51E-05 |
| 19 | GO:0009411: response to UV | 8.51E-05 |
| 20 | GO:0017148: negative regulation of translation | 1.00E-04 |
| 21 | GO:0000413: protein peptidyl-prolyl isomerization | 1.22E-04 |
| 22 | GO:0009772: photosynthetic electron transport in photosystem II | 1.33E-04 |
| 23 | GO:0010196: nonphotochemical quenching | 1.33E-04 |
| 24 | GO:0019478: D-amino acid catabolic process | 2.04E-04 |
| 25 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.04E-04 |
| 26 | GO:1904964: positive regulation of phytol biosynthetic process | 2.04E-04 |
| 27 | GO:0042759: long-chain fatty acid biosynthetic process | 2.04E-04 |
| 28 | GO:0042371: vitamin K biosynthetic process | 2.04E-04 |
| 29 | GO:0009828: plant-type cell wall loosening | 2.41E-04 |
| 30 | GO:0010027: thylakoid membrane organization | 3.07E-04 |
| 31 | GO:0006949: syncytium formation | 3.60E-04 |
| 32 | GO:0006729: tetrahydrobiopterin biosynthetic process | 4.57E-04 |
| 33 | GO:0006568: tryptophan metabolic process | 4.57E-04 |
| 34 | GO:0010024: phytochromobilin biosynthetic process | 4.57E-04 |
| 35 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.57E-04 |
| 36 | GO:0042742: defense response to bacterium | 4.63E-04 |
| 37 | GO:0010143: cutin biosynthetic process | 6.10E-04 |
| 38 | GO:0006788: heme oxidation | 7.44E-04 |
| 39 | GO:0071492: cellular response to UV-A | 7.44E-04 |
| 40 | GO:0010025: wax biosynthetic process | 7.58E-04 |
| 41 | GO:0019344: cysteine biosynthetic process | 8.38E-04 |
| 42 | GO:0071484: cellular response to light intensity | 1.06E-03 |
| 43 | GO:0009102: biotin biosynthetic process | 1.06E-03 |
| 44 | GO:0051639: actin filament network formation | 1.06E-03 |
| 45 | GO:0006241: CTP biosynthetic process | 1.06E-03 |
| 46 | GO:0006165: nucleoside diphosphate phosphorylation | 1.06E-03 |
| 47 | GO:0006228: UTP biosynthetic process | 1.06E-03 |
| 48 | GO:0010088: phloem development | 1.06E-03 |
| 49 | GO:0009650: UV protection | 1.06E-03 |
| 50 | GO:0055070: copper ion homeostasis | 1.06E-03 |
| 51 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.06E-03 |
| 52 | GO:0009664: plant-type cell wall organization | 1.07E-03 |
| 53 | GO:0071486: cellular response to high light intensity | 1.41E-03 |
| 54 | GO:0051764: actin crosslink formation | 1.41E-03 |
| 55 | GO:0006183: GTP biosynthetic process | 1.41E-03 |
| 56 | GO:0044206: UMP salvage | 1.41E-03 |
| 57 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.41E-03 |
| 58 | GO:0006096: glycolytic process | 1.44E-03 |
| 59 | GO:0042335: cuticle development | 1.51E-03 |
| 60 | GO:0006665: sphingolipid metabolic process | 1.80E-03 |
| 61 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.80E-03 |
| 62 | GO:0043097: pyrimidine nucleoside salvage | 1.80E-03 |
| 63 | GO:0042549: photosystem II stabilization | 2.21E-03 |
| 64 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.21E-03 |
| 65 | GO:0045454: cell redox homeostasis | 2.21E-03 |
| 66 | GO:0006206: pyrimidine nucleobase metabolic process | 2.21E-03 |
| 67 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.21E-03 |
| 68 | GO:0010555: response to mannitol | 2.66E-03 |
| 69 | GO:0042372: phylloquinone biosynthetic process | 2.66E-03 |
| 70 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.66E-03 |
| 71 | GO:0010189: vitamin E biosynthetic process | 2.66E-03 |
| 72 | GO:0048564: photosystem I assembly | 3.63E-03 |
| 73 | GO:0008610: lipid biosynthetic process | 3.63E-03 |
| 74 | GO:0009642: response to light intensity | 3.63E-03 |
| 75 | GO:0045490: pectin catabolic process | 3.65E-03 |
| 76 | GO:0009817: defense response to fungus, incompatible interaction | 3.76E-03 |
| 77 | GO:0006526: arginine biosynthetic process | 4.15E-03 |
| 78 | GO:0015780: nucleotide-sugar transport | 4.70E-03 |
| 79 | GO:0010206: photosystem II repair | 4.70E-03 |
| 80 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.27E-03 |
| 81 | GO:0042761: very long-chain fatty acid biosynthetic process | 5.27E-03 |
| 82 | GO:0045036: protein targeting to chloroplast | 5.86E-03 |
| 83 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.86E-03 |
| 84 | GO:0006535: cysteine biosynthetic process from serine | 5.86E-03 |
| 85 | GO:0009826: unidimensional cell growth | 6.05E-03 |
| 86 | GO:0009658: chloroplast organization | 6.35E-03 |
| 87 | GO:0009773: photosynthetic electron transport in photosystem I | 6.48E-03 |
| 88 | GO:0043085: positive regulation of catalytic activity | 6.48E-03 |
| 89 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.48E-03 |
| 90 | GO:0006790: sulfur compound metabolic process | 7.12E-03 |
| 91 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.12E-03 |
| 92 | GO:2000012: regulation of auxin polar transport | 7.78E-03 |
| 93 | GO:0006006: glucose metabolic process | 7.78E-03 |
| 94 | GO:0019253: reductive pentose-phosphate cycle | 8.47E-03 |
| 95 | GO:0046854: phosphatidylinositol phosphorylation | 9.17E-03 |
| 96 | GO:0046688: response to copper ion | 9.17E-03 |
| 97 | GO:0009116: nucleoside metabolic process | 1.06E-02 |
| 98 | GO:0000027: ribosomal large subunit assembly | 1.06E-02 |
| 99 | GO:0051017: actin filament bundle assembly | 1.06E-02 |
| 100 | GO:0006457: protein folding | 1.07E-02 |
| 101 | GO:0030245: cellulose catabolic process | 1.30E-02 |
| 102 | GO:0010091: trichome branching | 1.47E-02 |
| 103 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.55E-02 |
| 104 | GO:0080022: primary root development | 1.64E-02 |
| 105 | GO:0009790: embryo development | 1.73E-02 |
| 106 | GO:0006520: cellular amino acid metabolic process | 1.73E-02 |
| 107 | GO:0006662: glycerol ether metabolic process | 1.73E-02 |
| 108 | GO:0007018: microtubule-based movement | 1.82E-02 |
| 109 | GO:0015986: ATP synthesis coupled proton transport | 1.82E-02 |
| 110 | GO:0032502: developmental process | 2.11E-02 |
| 111 | GO:0009567: double fertilization forming a zygote and endosperm | 2.30E-02 |
| 112 | GO:0016126: sterol biosynthetic process | 2.61E-02 |
| 113 | GO:0016311: dephosphorylation | 3.05E-02 |
| 114 | GO:0018298: protein-chromophore linkage | 3.16E-02 |
| 115 | GO:0009409: response to cold | 3.28E-02 |
| 116 | GO:0007568: aging | 3.50E-02 |
| 117 | GO:0034599: cellular response to oxidative stress | 3.86E-02 |
| 118 | GO:0080167: response to karrikin | 3.92E-02 |
| 119 | GO:0030001: metal ion transport | 4.10E-02 |
| 120 | GO:0006631: fatty acid metabolic process | 4.22E-02 |
| 121 | GO:0042542: response to hydrogen peroxide | 4.35E-02 |
| 122 | GO:0010114: response to red light | 4.47E-02 |
| 123 | GO:0009644: response to high light intensity | 4.73E-02 |
| 124 | GO:0008643: carbohydrate transport | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 2 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 3 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 4 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 5 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 6 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 7 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 8 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 9 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 10 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 11 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 12 | GO:0003735: structural constituent of ribosome | 2.85E-17 |
| 13 | GO:0019843: rRNA binding | 1.01E-16 |
| 14 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.97E-06 |
| 15 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 7.24E-06 |
| 16 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.48E-06 |
| 17 | GO:0043023: ribosomal large subunit binding | 1.66E-05 |
| 18 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.66E-05 |
| 19 | GO:0016851: magnesium chelatase activity | 1.66E-05 |
| 20 | GO:0004659: prenyltransferase activity | 3.05E-05 |
| 21 | GO:0005507: copper ion binding | 3.51E-05 |
| 22 | GO:0051920: peroxiredoxin activity | 1.00E-04 |
| 23 | GO:0016209: antioxidant activity | 1.70E-04 |
| 24 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.04E-04 |
| 25 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 2.04E-04 |
| 26 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.04E-04 |
| 27 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.04E-04 |
| 28 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 2.04E-04 |
| 29 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.04E-04 |
| 30 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.04E-04 |
| 31 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 2.04E-04 |
| 32 | GO:0004163: diphosphomevalonate decarboxylase activity | 2.04E-04 |
| 33 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.57E-04 |
| 34 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 7.44E-04 |
| 35 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 7.44E-04 |
| 36 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 7.44E-04 |
| 37 | GO:0050734: hydroxycinnamoyltransferase activity | 7.44E-04 |
| 38 | GO:0005528: FK506 binding | 8.38E-04 |
| 39 | GO:0008097: 5S rRNA binding | 1.06E-03 |
| 40 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.06E-03 |
| 41 | GO:0004550: nucleoside diphosphate kinase activity | 1.06E-03 |
| 42 | GO:0022891: substrate-specific transmembrane transporter activity | 1.20E-03 |
| 43 | GO:0030570: pectate lyase activity | 1.20E-03 |
| 44 | GO:0004845: uracil phosphoribosyltransferase activity | 1.41E-03 |
| 45 | GO:0016836: hydro-lyase activity | 1.41E-03 |
| 46 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.41E-03 |
| 47 | GO:0043495: protein anchor | 1.41E-03 |
| 48 | GO:0004392: heme oxygenase (decyclizing) activity | 1.41E-03 |
| 49 | GO:0009922: fatty acid elongase activity | 1.80E-03 |
| 50 | GO:0004040: amidase activity | 1.80E-03 |
| 51 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.21E-03 |
| 52 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.21E-03 |
| 53 | GO:0042803: protein homodimerization activity | 2.37E-03 |
| 54 | GO:0004124: cysteine synthase activity | 2.66E-03 |
| 55 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.66E-03 |
| 56 | GO:0102391: decanoate--CoA ligase activity | 2.66E-03 |
| 57 | GO:0004849: uridine kinase activity | 2.66E-03 |
| 58 | GO:0016168: chlorophyll binding | 3.05E-03 |
| 59 | GO:0004467: long-chain fatty acid-CoA ligase activity | 3.13E-03 |
| 60 | GO:0019899: enzyme binding | 3.13E-03 |
| 61 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 4.70E-03 |
| 62 | GO:0042802: identical protein binding | 4.94E-03 |
| 63 | GO:0047617: acyl-CoA hydrolase activity | 5.27E-03 |
| 64 | GO:0008047: enzyme activator activity | 5.86E-03 |
| 65 | GO:0008378: galactosyltransferase activity | 7.12E-03 |
| 66 | GO:0051287: NAD binding | 7.43E-03 |
| 67 | GO:0008266: poly(U) RNA binding | 8.47E-03 |
| 68 | GO:0051087: chaperone binding | 1.14E-02 |
| 69 | GO:0008810: cellulase activity | 1.38E-02 |
| 70 | GO:0008514: organic anion transmembrane transporter activity | 1.47E-02 |
| 71 | GO:0047134: protein-disulfide reductase activity | 1.55E-02 |
| 72 | GO:0016829: lyase activity | 1.60E-02 |
| 73 | GO:0030170: pyridoxal phosphate binding | 1.64E-02 |
| 74 | GO:0008080: N-acetyltransferase activity | 1.73E-02 |
| 75 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.73E-02 |
| 76 | GO:0004791: thioredoxin-disulfide reductase activity | 1.82E-02 |
| 77 | GO:0005509: calcium ion binding | 1.86E-02 |
| 78 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.21E-02 |
| 79 | GO:0051015: actin filament binding | 2.21E-02 |
| 80 | GO:0016791: phosphatase activity | 2.30E-02 |
| 81 | GO:0016887: ATPase activity | 2.38E-02 |
| 82 | GO:0008483: transaminase activity | 2.41E-02 |
| 83 | GO:0008168: methyltransferase activity | 3.05E-02 |
| 84 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.05E-02 |
| 85 | GO:0016491: oxidoreductase activity | 3.15E-02 |
| 86 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.16E-02 |
| 87 | GO:0004601: peroxidase activity | 3.17E-02 |
| 88 | GO:0016788: hydrolase activity, acting on ester bonds | 3.23E-02 |
| 89 | GO:0016740: transferase activity | 3.61E-02 |
| 90 | GO:0003746: translation elongation factor activity | 3.74E-02 |
| 91 | GO:0003993: acid phosphatase activity | 3.86E-02 |
| 92 | GO:0050661: NADP binding | 4.10E-02 |
| 93 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.10E-02 |
| 94 | GO:0004185: serine-type carboxypeptidase activity | 4.47E-02 |
| 95 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.73E-02 |
| 96 | GO:0043621: protein self-association | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 3 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 4 | GO:0009570: chloroplast stroma | 1.10E-60 |
| 5 | GO:0009507: chloroplast | 1.46E-47 |
| 6 | GO:0009941: chloroplast envelope | 2.61E-36 |
| 7 | GO:0009579: thylakoid | 6.11E-32 |
| 8 | GO:0009534: chloroplast thylakoid | 1.78E-18 |
| 9 | GO:0031977: thylakoid lumen | 9.66E-18 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 9.42E-17 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 1.01E-16 |
| 12 | GO:0005840: ribosome | 2.94E-16 |
| 13 | GO:0030095: chloroplast photosystem II | 5.39E-07 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 1.48E-06 |
| 15 | GO:0010007: magnesium chelatase complex | 7.24E-06 |
| 16 | GO:0019898: extrinsic component of membrane | 7.73E-06 |
| 17 | GO:0000311: plastid large ribosomal subunit | 1.83E-05 |
| 18 | GO:0016020: membrane | 3.86E-05 |
| 19 | GO:0009523: photosystem II | 1.68E-04 |
| 20 | GO:0009547: plastid ribosome | 2.04E-04 |
| 21 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.04E-04 |
| 22 | GO:0009923: fatty acid elongase complex | 2.04E-04 |
| 23 | GO:0010319: stromule | 2.63E-04 |
| 24 | GO:0022626: cytosolic ribosome | 3.84E-04 |
| 25 | GO:0000312: plastid small ribosomal subunit | 6.10E-04 |
| 26 | GO:0009536: plastid | 7.30E-04 |
| 27 | GO:0009509: chromoplast | 7.44E-04 |
| 28 | GO:0015935: small ribosomal subunit | 1.01E-03 |
| 29 | GO:0032432: actin filament bundle | 1.06E-03 |
| 30 | GO:0055035: plastid thylakoid membrane | 1.80E-03 |
| 31 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.21E-03 |
| 32 | GO:0000793: condensed chromosome | 2.21E-03 |
| 33 | GO:0000794: condensed nuclear chromosome | 3.13E-03 |
| 34 | GO:0005884: actin filament | 6.48E-03 |
| 35 | GO:0090404: pollen tube tip | 6.48E-03 |
| 36 | GO:0022625: cytosolic large ribosomal subunit | 8.91E-03 |
| 37 | GO:0042651: thylakoid membrane | 1.14E-02 |
| 38 | GO:0009706: chloroplast inner membrane | 1.18E-02 |
| 39 | GO:0005802: trans-Golgi network | 1.48E-02 |
| 40 | GO:0005871: kinesin complex | 1.55E-02 |
| 41 | GO:0005768: endosome | 1.80E-02 |
| 42 | GO:0048046: apoplast | 2.12E-02 |
| 43 | GO:0005618: cell wall | 2.49E-02 |
| 44 | GO:0046658: anchored component of plasma membrane | 2.71E-02 |
| 45 | GO:0022627: cytosolic small ribosomal subunit | 2.71E-02 |
| 46 | GO:0009707: chloroplast outer membrane | 3.16E-02 |
| 47 | GO:0000139: Golgi membrane | 3.28E-02 |
| 48 | GO:0015934: large ribosomal subunit | 3.50E-02 |
| 49 | GO:0005874: microtubule | 3.79E-02 |