co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G44440

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015995: chlorophyll biosynthetic process	2.41E-07
2	GO:0006782: protoporphyrinogen IX biosynthetic process	1.71E-06
3	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	6.06E-06
4	GO:0015979: photosynthesis	2.16E-05
5	GO:0009647: skotomorphogenesis	4.72E-05
6	GO:0010306: rhamnogalacturonan II biosynthetic process	4.72E-05
7	GO:0009735: response to cytokinin	6.85E-05
8	GO:0006783: heme biosynthetic process	2.43E-04
9	GO:0009245: lipid A biosynthetic process	2.43E-04
10	GO:0006779: porphyrin-containing compound biosynthetic process	2.72E-04
11	GO:0019684: photosynthesis, light reaction	3.33E-04
12	GO:0007017: microtubule-based process	5.68E-04
13	GO:0042335: cuticle development	7.91E-04
14	GO:0048868: pollen tube development	8.30E-04
15	GO:0010193: response to ozone	9.49E-04
16	GO:0000302: response to reactive oxygen species	9.49E-04
17	GO:0009627: systemic acquired resistance	1.29E-03
18	GO:0000160: phosphorelay signal transduction system	1.47E-03
19	GO:0034599: cellular response to oxidative stress	1.72E-03
20	GO:0009640: photomorphogenesis	1.98E-03
21	GO:0009736: cytokinin-activated signaling pathway	2.41E-03
22	GO:0010224: response to UV-B	2.47E-03
23	GO:0042744: hydrogen peroxide catabolic process	3.89E-03
24	GO:0006633: fatty acid biosynthetic process	4.16E-03
25	GO:0009860: pollen tube growth	6.30E-03
26	GO:0009723: response to ethylene	6.61E-03
27	GO:0009416: response to light stimulus	1.37E-02
28	GO:0009611: response to wounding	1.39E-02
29	GO:0055114: oxidation-reduction process	1.63E-02
30	GO:0042742: defense response to bacterium	2.25E-02
31	GO:0046686: response to cadmium ion	3.10E-02

Rank	GO Term	Adjusted P value
1	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	6.06E-06
2	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	6.06E-06
3	GO:0004853: uroporphyrinogen decarboxylase activity	6.06E-06
4	GO:0016630: protochlorophyllide reductase activity	1.65E-05
5	GO:0004130: cytochrome-c peroxidase activity	1.10E-04
6	GO:0031177: phosphopantetheine binding	1.10E-04
7	GO:0000035: acyl binding	1.34E-04
8	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	1.86E-04
9	GO:0008266: poly(U) RNA binding	4.30E-04
10	GO:0000156: phosphorelay response regulator activity	1.03E-03
11	GO:0005200: structural constituent of cytoskeleton	1.12E-03
12	GO:0004601: peroxidase activity	5.98E-03
13	GO:0005515: protein binding	6.54E-03
14	GO:0003924: GTPase activity	9.11E-03
15	GO:0005525: GTP binding	1.94E-02
16	GO:0005509: calcium ion binding	2.13E-02
17	GO:0016491: oxidoreductase activity	2.75E-02
18	GO:0020037: heme binding	3.12E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0009534: chloroplast thylakoid	6.02E-16
3	GO:0009535: chloroplast thylakoid membrane	2.67E-13
4	GO:0009507: chloroplast	9.37E-13
5	GO:0009538: photosystem I reaction center	6.46E-07
6	GO:0009543: chloroplast thylakoid lumen	3.36E-06
7	GO:0030095: chloroplast photosystem II	3.51E-06
8	GO:0042646: plastid nucleoid	4.72E-05
9	GO:0031977: thylakoid lumen	5.98E-05
10	GO:0009579: thylakoid	1.02E-04
11	GO:0016363: nuclear matrix	1.34E-04
12	GO:0009941: chloroplast envelope	1.92E-04
13	GO:0045298: tubulin complex	2.43E-04
14	GO:0009570: chloroplast stroma	3.31E-04
15	GO:0009654: photosystem II oxygen evolving complex	5.68E-04
16	GO:0019898: extrinsic component of membrane	9.08E-04
17	GO:0010287: plastoglobule	3.43E-03
18	GO:0005874: microtubule	6.78E-03
19	GO:0005622: intracellular	2.05E-02
20	GO:0005829: cytosol	3.70E-02