Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G43350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043201: response to leucine0.00E+00
2GO:0080053: response to phenylalanine0.00E+00
3GO:0002376: immune system process0.00E+00
4GO:0080052: response to histidine0.00E+00
5GO:0006983: ER overload response0.00E+00
6GO:0006793: phosphorus metabolic process0.00E+00
7GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
8GO:0051553: flavone biosynthetic process0.00E+00
9GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
10GO:0006182: cGMP biosynthetic process0.00E+00
11GO:0006592: ornithine biosynthetic process0.00E+00
12GO:0042742: defense response to bacterium1.79E-07
13GO:0009751: response to salicylic acid1.95E-07
14GO:0010150: leaf senescence4.10E-07
15GO:0009620: response to fungus6.28E-07
16GO:0009617: response to bacterium8.18E-07
17GO:0006874: cellular calcium ion homeostasis7.32E-06
18GO:0006468: protein phosphorylation8.67E-06
19GO:0010120: camalexin biosynthetic process1.54E-05
20GO:0006952: defense response1.86E-05
21GO:0002239: response to oomycetes4.07E-05
22GO:0010200: response to chitin4.69E-05
23GO:0070588: calcium ion transmembrane transport1.04E-04
24GO:0008219: cell death1.32E-04
25GO:0009407: toxin catabolic process1.57E-04
26GO:0002238: response to molecule of fungal origin1.63E-04
27GO:0051938: L-glutamate import3.40E-04
28GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.40E-04
29GO:0010941: regulation of cell death3.40E-04
30GO:0010726: positive regulation of hydrogen peroxide metabolic process3.40E-04
31GO:1901183: positive regulation of camalexin biosynthetic process3.40E-04
32GO:0046244: salicylic acid catabolic process3.40E-04
33GO:0042759: long-chain fatty acid biosynthetic process3.40E-04
34GO:0010266: response to vitamin B13.40E-04
35GO:0009636: response to toxic substance3.67E-04
36GO:0002229: defense response to oomycetes4.92E-04
37GO:0009821: alkaloid biosynthetic process5.35E-04
38GO:0043069: negative regulation of programmed cell death7.37E-04
39GO:0015802: basic amino acid transport7.40E-04
40GO:0006212: uracil catabolic process7.40E-04
41GO:0043066: negative regulation of apoptotic process7.40E-04
42GO:0019483: beta-alanine biosynthetic process7.40E-04
43GO:0042939: tripeptide transport7.40E-04
44GO:0006423: cysteinyl-tRNA aminoacylation7.40E-04
45GO:1902000: homogentisate catabolic process7.40E-04
46GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.40E-04
47GO:0030003: cellular cation homeostasis7.40E-04
48GO:0043091: L-arginine import7.40E-04
49GO:0051592: response to calcium ion7.40E-04
50GO:0080183: response to photooxidative stress7.40E-04
51GO:0009682: induced systemic resistance8.49E-04
52GO:0012501: programmed cell death9.69E-04
53GO:0009817: defense response to fungus, incompatible interaction1.09E-03
54GO:0009072: aromatic amino acid family metabolic process1.20E-03
55GO:0048281: inflorescence morphogenesis1.20E-03
56GO:0070475: rRNA base methylation1.20E-03
57GO:0010498: proteasomal protein catabolic process1.20E-03
58GO:0009062: fatty acid catabolic process1.20E-03
59GO:1900140: regulation of seedling development1.20E-03
60GO:0010351: lithium ion transport1.20E-03
61GO:0002237: response to molecule of bacterial origin1.23E-03
62GO:0000162: tryptophan biosynthetic process1.54E-03
63GO:0006508: proteolysis1.59E-03
64GO:0006487: protein N-linked glycosylation1.70E-03
65GO:0072334: UDP-galactose transmembrane transport1.72E-03
66GO:0048530: fruit morphogenesis1.72E-03
67GO:0006882: cellular zinc ion homeostasis1.72E-03
68GO:0046513: ceramide biosynthetic process1.72E-03
69GO:0048194: Golgi vesicle budding1.72E-03
70GO:0032259: methylation2.22E-03
71GO:0071456: cellular response to hypoxia2.26E-03
72GO:0060548: negative regulation of cell death2.31E-03
73GO:0006536: glutamate metabolic process2.31E-03
74GO:0080142: regulation of salicylic acid biosynthetic process2.31E-03
75GO:0042938: dipeptide transport2.31E-03
76GO:0030308: negative regulation of cell growth2.96E-03
77GO:0000304: response to singlet oxygen2.96E-03
78GO:0009697: salicylic acid biosynthetic process2.96E-03
79GO:0046283: anthocyanin-containing compound metabolic process2.96E-03
80GO:0006564: L-serine biosynthetic process2.96E-03
81GO:0007029: endoplasmic reticulum organization2.96E-03
82GO:0010256: endomembrane system organization3.65E-03
83GO:1900425: negative regulation of defense response to bacterium3.65E-03
84GO:0006561: proline biosynthetic process3.65E-03
85GO:0010942: positive regulation of cell death3.65E-03
86GO:0050832: defense response to fungus3.85E-03
87GO:0009851: auxin biosynthetic process3.89E-03
88GO:0010199: organ boundary specification between lateral organs and the meristem4.40E-03
89GO:0030163: protein catabolic process4.74E-03
90GO:0010252: auxin homeostasis5.05E-03
91GO:1900056: negative regulation of leaf senescence5.19E-03
92GO:0019745: pentacyclic triterpenoid biosynthetic process5.19E-03
93GO:0030026: cellular manganese ion homeostasis5.19E-03
94GO:1900057: positive regulation of leaf senescence5.19E-03
95GO:0055114: oxidation-reduction process5.60E-03
96GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.03E-03
97GO:0030091: protein repair6.03E-03
98GO:0009819: drought recovery6.03E-03
99GO:0009850: auxin metabolic process6.03E-03
100GO:0043068: positive regulation of programmed cell death6.03E-03
101GO:1900150: regulation of defense response to fungus6.03E-03
102GO:0009615: response to virus6.03E-03
103GO:0009607: response to biotic stimulus6.38E-03
104GO:0009627: systemic acquired resistance6.73E-03
105GO:0009699: phenylpropanoid biosynthetic process6.92E-03
106GO:0006075: (1->3)-beta-D-glucan biosynthetic process6.92E-03
107GO:0006526: arginine biosynthetic process6.92E-03
108GO:0010204: defense response signaling pathway, resistance gene-independent6.92E-03
109GO:0030968: endoplasmic reticulum unfolded protein response6.92E-03
110GO:0043562: cellular response to nitrogen levels6.92E-03
111GO:0009808: lignin metabolic process6.92E-03
112GO:0007338: single fertilization7.85E-03
113GO:0051865: protein autoubiquitination7.85E-03
114GO:0010112: regulation of systemic acquired resistance7.85E-03
115GO:0015780: nucleotide-sugar transport7.85E-03
116GO:0009813: flavonoid biosynthetic process8.28E-03
117GO:0006499: N-terminal protein myristoylation8.69E-03
118GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.82E-03
119GO:0008202: steroid metabolic process8.82E-03
120GO:0055062: phosphate ion homeostasis9.84E-03
121GO:0009688: abscisic acid biosynthetic process9.84E-03
122GO:0009753: response to jasmonic acid1.05E-02
123GO:0000038: very long-chain fatty acid metabolic process1.09E-02
124GO:0006816: calcium ion transport1.09E-02
125GO:0009089: lysine biosynthetic process via diaminopimelate1.09E-02
126GO:0052544: defense response by callose deposition in cell wall1.09E-02
127GO:0007166: cell surface receptor signaling pathway1.11E-02
128GO:0006790: sulfur compound metabolic process1.20E-02
129GO:0071365: cellular response to auxin stimulus1.20E-02
130GO:0000266: mitochondrial fission1.20E-02
131GO:0042542: response to hydrogen peroxide1.24E-02
132GO:0006626: protein targeting to mitochondrion1.31E-02
133GO:0006807: nitrogen compound metabolic process1.31E-02
134GO:0055046: microgametogenesis1.31E-02
135GO:0009718: anthocyanin-containing compound biosynthetic process1.31E-02
136GO:0008643: carbohydrate transport1.40E-02
137GO:0010143: cutin biosynthetic process1.43E-02
138GO:0046854: phosphatidylinositol phosphorylation1.55E-02
139GO:0010053: root epidermal cell differentiation1.55E-02
140GO:0009846: pollen germination1.63E-02
141GO:0042538: hyperosmotic salinity response1.63E-02
142GO:0010025: wax biosynthetic process1.67E-02
143GO:0009809: lignin biosynthetic process1.75E-02
144GO:0009863: salicylic acid mediated signaling pathway1.80E-02
145GO:0080147: root hair cell development1.80E-02
146GO:2000377: regulation of reactive oxygen species metabolic process1.80E-02
147GO:0005992: trehalose biosynthetic process1.80E-02
148GO:0010073: meristem maintenance1.93E-02
149GO:0009735: response to cytokinin1.95E-02
150GO:0003333: amino acid transmembrane transport2.07E-02
151GO:0019748: secondary metabolic process2.21E-02
152GO:0006012: galactose metabolic process2.35E-02
153GO:0010584: pollen exine formation2.49E-02
154GO:0009561: megagametogenesis2.49E-02
155GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.64E-02
156GO:0009742: brassinosteroid mediated signaling pathway2.64E-02
157GO:0008360: regulation of cell shape2.94E-02
158GO:0010197: polar nucleus fusion2.94E-02
159GO:0007165: signal transduction3.02E-02
160GO:0048544: recognition of pollen3.10E-02
161GO:0006814: sodium ion transport3.10E-02
162GO:0042752: regulation of circadian rhythm3.10E-02
163GO:0010183: pollen tube guidance3.25E-02
164GO:0009058: biosynthetic process3.28E-02
165GO:0000302: response to reactive oxygen species3.42E-02
166GO:0006891: intra-Golgi vesicle-mediated transport3.42E-02
167GO:0010193: response to ozone3.42E-02
168GO:0006635: fatty acid beta-oxidation3.42E-02
169GO:0016032: viral process3.58E-02
170GO:0009630: gravitropism3.58E-02
171GO:1901657: glycosyl compound metabolic process3.75E-02
172GO:0009567: double fertilization forming a zygote and endosperm3.92E-02
173GO:0006904: vesicle docking involved in exocytosis4.09E-02
174GO:0009816: defense response to bacterium, incompatible interaction4.62E-02
175GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.79E-02
176GO:0006888: ER to Golgi vesicle-mediated transport4.98E-02
177GO:0006950: response to stress4.98E-02
RankGO TermAdjusted P value
1GO:0033759: flavone synthase activity0.00E+00
2GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
3GO:0003837: beta-ureidopropionase activity0.00E+00
4GO:0070577: lysine-acetylated histone binding0.00E+00
5GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
6GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity0.00E+00
7GO:0008777: acetylornithine deacetylase activity0.00E+00
8GO:0016504: peptidase activator activity0.00E+00
9GO:0016034: maleylacetoacetate isomerase activity0.00E+00
10GO:0032442: phenylcoumaran benzylic ether reductase activity0.00E+00
11GO:0005516: calmodulin binding2.91E-07
12GO:0004190: aspartic-type endopeptidase activity3.61E-06
13GO:0004364: glutathione transferase activity2.77E-05
14GO:0005388: calcium-transporting ATPase activity7.20E-05
15GO:0010279: indole-3-acetic acid amido synthetase activity7.23E-05
16GO:0004970: ionotropic glutamate receptor activity1.04E-04
17GO:0005217: intracellular ligand-gated ion channel activity1.04E-04
18GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.13E-04
19GO:0004674: protein serine/threonine kinase activity1.28E-04
20GO:0016301: kinase activity2.19E-04
21GO:0004012: phospholipid-translocating ATPase activity2.22E-04
22GO:0005524: ATP binding3.37E-04
23GO:0008809: carnitine racemase activity3.40E-04
24GO:0004425: indole-3-glycerol-phosphate synthase activity3.40E-04
25GO:0033984: indole-3-glycerol-phosphate lyase activity3.40E-04
26GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.40E-04
27GO:0031957: very long-chain fatty acid-CoA ligase activity3.40E-04
28GO:0010285: L,L-diaminopimelate aminotransferase activity3.40E-04
29GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.40E-04
30GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity3.40E-04
31GO:0016844: strictosidine synthase activity6.32E-04
32GO:0004817: cysteine-tRNA ligase activity7.40E-04
33GO:0032934: sterol binding7.40E-04
34GO:0042937: tripeptide transporter activity7.40E-04
35GO:0004103: choline kinase activity7.40E-04
36GO:0004566: beta-glucuronidase activity7.40E-04
37GO:0050291: sphingosine N-acyltransferase activity7.40E-04
38GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.03E-03
39GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.10E-03
40GO:0005262: calcium channel activity1.10E-03
41GO:0008430: selenium binding1.20E-03
42GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.20E-03
43GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.20E-03
44GO:0004383: guanylate cyclase activity1.20E-03
45GO:0016595: glutamate binding1.20E-03
46GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.31E-03
47GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.47E-03
48GO:0015189: L-lysine transmembrane transporter activity1.72E-03
49GO:0015181: arginine transmembrane transporter activity1.72E-03
50GO:0010178: IAA-amino acid conjugate hydrolase activity1.72E-03
51GO:0042299: lupeol synthase activity1.72E-03
52GO:0004165: dodecenoyl-CoA delta-isomerase activity1.72E-03
53GO:0004351: glutamate decarboxylase activity1.72E-03
54GO:0004672: protein kinase activity1.88E-03
55GO:0042936: dipeptide transporter activity2.31E-03
56GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.31E-03
57GO:0015369: calcium:proton antiporter activity2.31E-03
58GO:0005313: L-glutamate transmembrane transporter activity2.31E-03
59GO:0070628: proteasome binding2.31E-03
60GO:0004031: aldehyde oxidase activity2.31E-03
61GO:0050302: indole-3-acetaldehyde oxidase activity2.31E-03
62GO:0004576: oligosaccharyl transferase activity2.31E-03
63GO:0016866: intramolecular transferase activity2.31E-03
64GO:0015368: calcium:cation antiporter activity2.31E-03
65GO:0004834: tryptophan synthase activity2.31E-03
66GO:0045431: flavonol synthase activity2.96E-03
67GO:0005459: UDP-galactose transmembrane transporter activity2.96E-03
68GO:0004040: amidase activity2.96E-03
69GO:0005496: steroid binding2.96E-03
70GO:0046872: metal ion binding3.13E-03
71GO:0008168: methyltransferase activity3.54E-03
72GO:0004029: aldehyde dehydrogenase (NAD) activity3.65E-03
73GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.40E-03
74GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.40E-03
75GO:0102391: decanoate--CoA ligase activity4.40E-03
76GO:0005261: cation channel activity4.40E-03
77GO:0004656: procollagen-proline 4-dioxygenase activity4.40E-03
78GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.40E-03
79GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.40E-03
80GO:0005338: nucleotide-sugar transmembrane transporter activity5.19E-03
81GO:0004467: long-chain fatty acid-CoA ligase activity5.19E-03
82GO:0008237: metallopeptidase activity5.37E-03
83GO:0004034: aldose 1-epimerase activity6.03E-03
84GO:0052747: sinapyl alcohol dehydrogenase activity6.03E-03
85GO:0004033: aldo-keto reductase (NADP) activity6.03E-03
86GO:0015491: cation:cation antiporter activity6.03E-03
87GO:0004714: transmembrane receptor protein tyrosine kinase activity6.03E-03
88GO:0005509: calcium ion binding6.36E-03
89GO:0008142: oxysterol binding6.92E-03
90GO:0003843: 1,3-beta-D-glucan synthase activity6.92E-03
91GO:0008173: RNA methyltransferase activity6.92E-03
92GO:0030247: polysaccharide binding7.10E-03
93GO:0004683: calmodulin-dependent protein kinase activity7.10E-03
94GO:0071949: FAD binding7.85E-03
95GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.82E-03
96GO:0015174: basic amino acid transmembrane transporter activity8.82E-03
97GO:0008171: O-methyltransferase activity9.84E-03
98GO:0004713: protein tyrosine kinase activity9.84E-03
99GO:0009055: electron carrier activity1.05E-02
100GO:0005543: phospholipid binding1.09E-02
101GO:0045551: cinnamyl-alcohol dehydrogenase activity1.20E-02
102GO:0015095: magnesium ion transmembrane transporter activity1.31E-02
103GO:0051537: 2 iron, 2 sulfur cluster binding1.40E-02
104GO:0003954: NADH dehydrogenase activity1.80E-02
105GO:0031418: L-ascorbic acid binding1.80E-02
106GO:0050660: flavin adenine dinucleotide binding1.96E-02
107GO:0004707: MAP kinase activity2.07E-02
108GO:0033612: receptor serine/threonine kinase binding2.07E-02
109GO:0005506: iron ion binding2.16E-02
110GO:0008514: organic anion transmembrane transporter activity2.49E-02
111GO:0015035: protein disulfide oxidoreductase activity2.56E-02
112GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.96E-02
113GO:0016853: isomerase activity3.10E-02
114GO:0010181: FMN binding3.10E-02
115GO:0030170: pyridoxal phosphate binding3.46E-02
116GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.00E-02
117GO:0008483: transaminase activity4.09E-02
118GO:0016722: oxidoreductase activity, oxidizing metal ions4.09E-02
119GO:0015297: antiporter activity4.10E-02
120GO:0051213: dioxygenase activity4.44E-02
121GO:0020037: heme binding4.72E-02
122GO:0009931: calcium-dependent protein serine/threonine kinase activity4.80E-02
123GO:0102483: scopolin beta-glucosidase activity4.98E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.17E-09
2GO:0005886: plasma membrane1.57E-08
3GO:0005783: endoplasmic reticulum1.02E-06
4GO:0008250: oligosaccharyltransferase complex1.13E-04
5GO:0005789: endoplasmic reticulum membrane2.13E-04
6GO:0045252: oxoglutarate dehydrogenase complex3.40E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane7.40E-04
8GO:0005765: lysosomal membrane8.49E-04
9GO:0005829: cytosol1.16E-03
10GO:0070062: extracellular exosome1.72E-03
11GO:0030660: Golgi-associated vesicle membrane2.31E-03
12GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.31E-03
13GO:0030126: COPI vesicle coat2.96E-03
14GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane6.03E-03
15GO:0000148: 1,3-beta-D-glucan synthase complex6.92E-03
16GO:0016020: membrane8.23E-03
17GO:0005795: Golgi stack1.55E-02
18GO:0031966: mitochondrial membrane1.63E-02
19GO:0005769: early endosome1.67E-02
20GO:0005839: proteasome core complex2.07E-02
21GO:0009504: cell plate3.25E-02
22GO:0019898: extrinsic component of membrane3.25E-02
23GO:0000145: exocyst3.58E-02
24GO:0010319: stromule4.09E-02
25GO:0009705: plant-type vacuole membrane4.29E-02
26GO:0005788: endoplasmic reticulum lumen4.62E-02
27GO:0005576: extracellular region4.87E-02
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Gene type



Gene DE type