co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G42310

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051553: flavone biosynthetic process	0.00E+00
2	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
3	GO:0043201: response to leucine	0.00E+00
4	GO:0080052: response to histidine	0.00E+00
5	GO:0080053: response to phenylalanine	0.00E+00
6	GO:0080147: root hair cell development	8.58E-06
7	GO:0006102: isocitrate metabolic process	5.25E-05
8	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.25E-05
9	GO:0034971: histone H3-R17 methylation	9.50E-05
10	GO:0042350: GDP-L-fucose biosynthetic process	9.50E-05
11	GO:0034970: histone H3-R2 methylation	9.50E-05
12	GO:0034972: histone H3-R26 methylation	9.50E-05
13	GO:0043687: post-translational protein modification	9.50E-05
14	GO:0042939: tripeptide transport	2.24E-04
15	GO:0060151: peroxisome localization	2.24E-04
16	GO:0080183: response to photooxidative stress	2.24E-04
17	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	2.24E-04
18	GO:0010618: aerenchyma formation	2.24E-04
19	GO:0051645: Golgi localization	2.24E-04
20	GO:0006212: uracil catabolic process	2.24E-04
21	GO:0031349: positive regulation of defense response	2.24E-04
22	GO:1902884: positive regulation of response to oxidative stress	2.24E-04
23	GO:0019483: beta-alanine biosynthetic process	2.24E-04
24	GO:0052325: cell wall pectin biosynthetic process	3.73E-04
25	GO:0009062: fatty acid catabolic process	3.73E-04
26	GO:0090436: leaf pavement cell development	3.73E-04
27	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	3.73E-04
28	GO:0015783: GDP-fucose transport	3.73E-04
29	GO:0006517: protein deglycosylation	3.73E-04
30	GO:0051646: mitochondrion localization	3.73E-04
31	GO:0009620: response to fungus	4.35E-04
32	GO:0050832: defense response to fungus	4.75E-04
33	GO:0006515: misfolded or incompletely synthesized protein catabolic process	5.37E-04
34	GO:0002239: response to oomycetes	5.37E-04
35	GO:0006516: glycoprotein catabolic process	5.37E-04
36	GO:0009226: nucleotide-sugar biosynthetic process	5.37E-04
37	GO:0009751: response to salicylic acid	5.98E-04
38	GO:0010188: response to microbial phytotoxin	7.14E-04
39	GO:0042938: dipeptide transport	7.14E-04
40	GO:0030163: protein catabolic process	8.26E-04
41	GO:0018279: protein N-linked glycosylation via asparagine	9.02E-04
42	GO:0000304: response to singlet oxygen	9.02E-04
43	GO:0030041: actin filament polymerization	9.02E-04
44	GO:0003006: developmental process involved in reproduction	1.10E-03
45	GO:0010942: positive regulation of cell death	1.10E-03
46	GO:0042176: regulation of protein catabolic process	1.10E-03
47	GO:0047484: regulation of response to osmotic stress	1.10E-03
48	GO:0010310: regulation of hydrogen peroxide metabolic process	1.31E-03
49	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.31E-03
50	GO:0009813: flavonoid biosynthetic process	1.40E-03
51	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.54E-03
52	GO:0006099: tricarboxylic acid cycle	1.75E-03
53	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.78E-03
54	GO:0006952: defense response	1.87E-03
55	GO:0043562: cellular response to nitrogen levels	2.03E-03
56	GO:0015780: nucleotide-sugar transport	2.29E-03
57	GO:0009821: alkaloid biosynthetic process	2.29E-03
58	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.56E-03
59	GO:0006032: chitin catabolic process	2.85E-03
60	GO:0006857: oligopeptide transport	3.09E-03
61	GO:0009682: induced systemic resistance	3.14E-03
62	GO:0019684: photosynthesis, light reaction	3.14E-03
63	GO:0000266: mitochondrial fission	3.44E-03
64	GO:0006807: nitrogen compound metabolic process	3.76E-03
65	GO:0030048: actin filament-based movement	3.76E-03
66	GO:0048467: gynoecium development	4.08E-03
67	GO:0042742: defense response to bacterium	4.21E-03
68	GO:0010039: response to iron ion	4.41E-03
69	GO:0009969: xyloglucan biosynthetic process	4.41E-03
70	GO:0009863: salicylic acid mediated signaling pathway	5.10E-03
71	GO:0016998: cell wall macromolecule catabolic process	5.83E-03
72	GO:0030433: ubiquitin-dependent ERAD pathway	6.20E-03
73	GO:0006012: galactose metabolic process	6.58E-03
74	GO:0006508: proteolysis	6.71E-03
75	GO:0009617: response to bacterium	8.42E-03
76	GO:0048544: recognition of pollen	8.63E-03
77	GO:0042752: regulation of circadian rhythm	8.63E-03
78	GO:0055072: iron ion homeostasis	9.06E-03
79	GO:0010183: pollen tube guidance	9.06E-03
80	GO:0006635: fatty acid beta-oxidation	9.51E-03
81	GO:0002229: defense response to oomycetes	9.51E-03
82	GO:0010193: response to ozone	9.51E-03
83	GO:0010090: trichome morphogenesis	1.04E-02
84	GO:0010252: auxin homeostasis	1.09E-02
85	GO:0009615: response to virus	1.23E-02
86	GO:0016126: sterol biosynthetic process	1.23E-02
87	GO:0001666: response to hypoxia	1.23E-02
88	GO:0007165: signal transduction	1.28E-02
89	GO:0009627: systemic acquired resistance	1.33E-02
90	GO:0009817: defense response to fungus, incompatible interaction	1.49E-02
91	GO:0048767: root hair elongation	1.54E-02
92	GO:0006811: ion transport	1.59E-02
93	GO:0045087: innate immune response	1.76E-02
94	GO:0009753: response to jasmonic acid	2.15E-02
95	GO:0008643: carbohydrate transport	2.23E-02
96	GO:0042538: hyperosmotic salinity response	2.47E-02
97	GO:0009809: lignin biosynthetic process	2.60E-02
98	GO:0006486: protein glycosylation	2.60E-02
99	GO:0051603: proteolysis involved in cellular protein catabolic process	2.67E-02
100	GO:0009909: regulation of flower development	2.80E-02
101	GO:0048316: seed development	3.00E-02
102	GO:0055114: oxidation-reduction process	3.04E-02
103	GO:0009626: plant-type hypersensitive response	3.07E-02
104	GO:0009624: response to nematode	3.34E-02
105	GO:0009611: response to wounding	3.64E-02
106	GO:0009058: biosynthetic process	4.07E-02
107	GO:0055085: transmembrane transport	4.51E-02
108	GO:0009737: response to abscisic acid	4.62E-02
109	GO:0006511: ubiquitin-dependent protein catabolic process	4.82E-02
110	GO:0010150: leaf senescence	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0000247: C-8 sterol isomerase activity	0.00E+00
2	GO:0047750: cholestenol delta-isomerase activity	0.00E+00
3	GO:0033759: flavone synthase activity	0.00E+00
4	GO:0052636: arabinosyltransferase activity	0.00E+00
5	GO:0003837: beta-ureidopropionase activity	0.00E+00
6	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
7	GO:0004449: isocitrate dehydrogenase (NAD+) activity	4.33E-06
8	GO:0004656: procollagen-proline 4-dioxygenase activity	2.96E-05
9	GO:0050577: GDP-L-fucose synthase activity	9.50E-05
10	GO:0008809: carnitine racemase activity	9.50E-05
11	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.45E-04
12	GO:0051980: iron-nicotianamine transmembrane transporter activity	2.24E-04
13	GO:0042937: tripeptide transporter activity	2.24E-04
14	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	2.24E-04
15	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	2.24E-04
16	GO:0004566: beta-glucuronidase activity	2.24E-04
17	GO:0008805: carbon-monoxide oxygenase activity	2.24E-04
18	GO:0030742: GTP-dependent protein binding	2.24E-04
19	GO:0035241: protein-arginine omega-N monomethyltransferase activity	2.24E-04
20	GO:0005457: GDP-fucose transmembrane transporter activity	3.73E-04
21	GO:0008469: histone-arginine N-methyltransferase activity	3.73E-04
22	GO:0004165: dodecenoyl-CoA delta-isomerase activity	5.37E-04
23	GO:0004576: oligosaccharyl transferase activity	7.14E-04
24	GO:0010279: indole-3-acetic acid amido synthetase activity	7.14E-04
25	GO:0042936: dipeptide transporter activity	7.14E-04
26	GO:0045431: flavonol synthase activity	9.02E-04
27	GO:0015301: anion:anion antiporter activity	9.02E-04
28	GO:0005452: inorganic anion exchanger activity	9.02E-04
29	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	9.02E-04
30	GO:0017137: Rab GTPase binding	9.02E-04
31	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.54E-03
32	GO:0004034: aldose 1-epimerase activity	1.78E-03
33	GO:0052747: sinapyl alcohol dehydrogenase activity	1.78E-03
34	GO:0016844: strictosidine synthase activity	2.56E-03
35	GO:0030234: enzyme regulator activity	2.85E-03
36	GO:0004568: chitinase activity	2.85E-03
37	GO:0016301: kinase activity	2.91E-03
38	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.44E-03
39	GO:0015198: oligopeptide transporter activity	3.44E-03
40	GO:0003779: actin binding	3.98E-03
41	GO:0003774: motor activity	4.08E-03
42	GO:0015035: protein disulfide oxidoreductase activity	4.22E-03
43	GO:0004190: aspartic-type endopeptidase activity	4.41E-03
44	GO:0031418: L-ascorbic acid binding	5.10E-03
45	GO:0004707: MAP kinase activity	5.83E-03
46	GO:0016853: isomerase activity	8.63E-03
47	GO:0050662: coenzyme binding	8.63E-03
48	GO:0043531: ADP binding	1.20E-02
49	GO:0004806: triglyceride lipase activity	1.38E-02
50	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.65E-02
51	GO:0042803: protein homodimerization activity	1.71E-02
52	GO:0008422: beta-glucosidase activity	1.87E-02
53	GO:0046872: metal ion binding	2.02E-02
54	GO:0003824: catalytic activity	2.03E-02
55	GO:0004185: serine-type carboxypeptidase activity	2.10E-02
56	GO:0009055: electron carrier activity	2.15E-02
57	GO:0051537: 2 iron, 2 sulfur cluster binding	2.23E-02
58	GO:0016491: oxidoreductase activity	2.55E-02
59	GO:0016298: lipase activity	2.67E-02
60	GO:0031625: ubiquitin protein ligase binding	2.80E-02
61	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.00E-02
62	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.00E-02
63	GO:0008565: protein transporter activity	4.46E-02
64	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.69E-02
65	GO:0015297: antiporter activity	4.77E-02
66	GO:0030246: carbohydrate binding	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0005911: cell-cell junction	9.50E-05
2	GO:0016021: integral component of membrane	3.42E-04
3	GO:0005737: cytoplasm	5.75E-04
4	GO:0008250: oligosaccharyltransferase complex	9.02E-04
5	GO:0016459: myosin complex	2.85E-03
6	GO:0005802: trans-Golgi network	2.95E-03
7	GO:0005765: lysosomal membrane	3.14E-03
8	GO:0008541: proteasome regulatory particle, lid subcomplex	3.14E-03
9	GO:0005768: endosome	3.59E-03
10	GO:0005750: mitochondrial respiratory chain complex III	4.08E-03
11	GO:0005886: plasma membrane	5.14E-03
12	GO:0005794: Golgi apparatus	9.06E-03
13	GO:0005783: endoplasmic reticulum	9.43E-03
14	GO:0005829: cytosol	1.41E-02
15	GO:0005643: nuclear pore	1.49E-02
16	GO:0090406: pollen tube	2.10E-02
17	GO:0009505: plant-type cell wall	2.40E-02
18	GO:0000502: proteasome complex	2.60E-02
19	GO:0000139: Golgi membrane	2.64E-02
20	GO:0005774: vacuolar membrane	2.73E-02
21	GO:0009506: plasmodesma	3.17E-02
22	GO:0009543: chloroplast thylakoid lumen	3.92E-02
23	GO:0009524: phragmoplast	4.07E-02
24	GO:0005777: peroxisome	4.08E-02
25	GO:0005576: extracellular region	4.71E-02