co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G41880

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
2	GO:0006182: cGMP biosynthetic process	0.00E+00
3	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
4	GO:0071327: cellular response to trehalose stimulus	0.00E+00
5	GO:0051245: negative regulation of cellular defense response	0.00E+00
6	GO:0015690: aluminum cation transport	0.00E+00
7	GO:1900367: positive regulation of defense response to insect	0.00E+00
8	GO:0009617: response to bacterium	1.55E-13
9	GO:0042742: defense response to bacterium	1.62E-12
10	GO:0006952: defense response	6.45E-09
11	GO:0009816: defense response to bacterium, incompatible interaction	2.50E-08
12	GO:0006468: protein phosphorylation	7.58E-08
13	GO:0043069: negative regulation of programmed cell death	1.74E-07
14	GO:0080142: regulation of salicylic acid biosynthetic process	1.79E-07
15	GO:0050832: defense response to fungus	1.74E-06
16	GO:0031349: positive regulation of defense response	2.19E-06
17	GO:0071456: cellular response to hypoxia	2.69E-06
18	GO:0010120: camalexin biosynthetic process	5.05E-06
19	GO:0010200: response to chitin	6.07E-06
20	GO:0010112: regulation of systemic acquired resistance	7.07E-06
21	GO:0007166: cell surface receptor signaling pathway	1.38E-05
22	GO:0009682: induced systemic resistance	1.64E-05
23	GO:0006612: protein targeting to membrane	1.83E-05
24	GO:0009627: systemic acquired resistance	2.85E-05
25	GO:0060548: negative regulation of cell death	3.35E-05
26	GO:0010363: regulation of plant-type hypersensitive response	3.35E-05
27	GO:0070588: calcium ion transmembrane transport	3.81E-05
28	GO:0006508: proteolysis	5.85E-05
29	GO:0009737: response to abscisic acid	6.71E-05
30	GO:0009759: indole glucosinolate biosynthetic process	7.90E-05
31	GO:0010942: positive regulation of cell death	7.90E-05
32	GO:0031348: negative regulation of defense response	8.36E-05
33	GO:0009625: response to insect	9.54E-05
34	GO:0006979: response to oxidative stress	1.34E-04
35	GO:0070370: cellular heat acclimation	1.45E-04
36	GO:0061025: membrane fusion	1.69E-04
37	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.85E-04
38	GO:0006891: intra-Golgi vesicle-mediated transport	2.06E-04
39	GO:0055081: anion homeostasis	2.16E-04
40	GO:0006643: membrane lipid metabolic process	2.16E-04
41	GO:1901183: positive regulation of camalexin biosynthetic process	2.16E-04
42	GO:0060862: negative regulation of floral organ abscission	2.16E-04
43	GO:0010266: response to vitamin B1	2.16E-04
44	GO:0010941: regulation of cell death	2.16E-04
45	GO:0009700: indole phytoalexin biosynthetic process	2.16E-04
46	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.29E-04
47	GO:1900426: positive regulation of defense response to bacterium	3.31E-04
48	GO:0052544: defense response by callose deposition in cell wall	4.49E-04
49	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.81E-04
50	GO:0008535: respiratory chain complex IV assembly	4.81E-04
51	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.81E-04
52	GO:0080185: effector dependent induction by symbiont of host immune response	4.81E-04
53	GO:0010618: aerenchyma formation	4.81E-04
54	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.15E-04
55	GO:0002213: defense response to insect	5.15E-04
56	GO:0034605: cellular response to heat	6.57E-04
57	GO:0002237: response to molecule of bacterial origin	6.57E-04
58	GO:0009751: response to salicylic acid	7.31E-04
59	GO:0042343: indole glucosinolate metabolic process	7.34E-04
60	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.83E-04
61	GO:1900140: regulation of seedling development	7.83E-04
62	GO:0072661: protein targeting to plasma membrane	7.83E-04
63	GO:0048281: inflorescence morphogenesis	7.83E-04
64	GO:0006887: exocytosis	8.05E-04
65	GO:0051707: response to other organism	8.91E-04
66	GO:0009863: salicylic acid mediated signaling pathway	9.02E-04
67	GO:0009409: response to cold	1.07E-03
68	GO:0048278: vesicle docking	1.09E-03
69	GO:0033014: tetrapyrrole biosynthetic process	1.12E-03
70	GO:0010148: transpiration	1.12E-03
71	GO:0048530: fruit morphogenesis	1.12E-03
72	GO:0071323: cellular response to chitin	1.12E-03
73	GO:0048194: Golgi vesicle budding	1.12E-03
74	GO:0034219: carbohydrate transmembrane transport	1.12E-03
75	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.18E-03
76	GO:0071219: cellular response to molecule of bacterial origin	1.48E-03
77	GO:0010508: positive regulation of autophagy	1.48E-03
78	GO:1901141: regulation of lignin biosynthetic process	1.48E-03
79	GO:0045088: regulation of innate immune response	1.48E-03
80	GO:0055114: oxidation-reduction process	1.67E-03
81	GO:0009626: plant-type hypersensitive response	1.72E-03
82	GO:0030041: actin filament polymerization	1.89E-03
83	GO:0006564: L-serine biosynthetic process	1.89E-03
84	GO:0031365: N-terminal protein amino acid modification	1.89E-03
85	GO:0010225: response to UV-C	1.89E-03
86	GO:0009697: salicylic acid biosynthetic process	1.89E-03
87	GO:0009414: response to water deprivation	1.90E-03
88	GO:0030163: protein catabolic process	2.46E-03
89	GO:0006886: intracellular protein transport	2.61E-03
90	GO:0009612: response to mechanical stimulus	2.80E-03
91	GO:0010199: organ boundary specification between lateral organs and the meristem	2.80E-03
92	GO:0010555: response to mannitol	2.80E-03
93	GO:0010310: regulation of hydrogen peroxide metabolic process	2.80E-03
94	GO:2000067: regulation of root morphogenesis	2.80E-03
95	GO:0000911: cytokinesis by cell plate formation	2.80E-03
96	GO:0010044: response to aluminum ion	3.30E-03
97	GO:0046470: phosphatidylcholine metabolic process	3.30E-03
98	GO:0043090: amino acid import	3.30E-03
99	GO:0071446: cellular response to salicylic acid stimulus	3.30E-03
100	GO:0006906: vesicle fusion	3.48E-03
101	GO:0030162: regulation of proteolysis	3.82E-03
102	GO:0009061: anaerobic respiration	3.82E-03
103	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.82E-03
104	GO:0010150: leaf senescence	4.02E-03
105	GO:0010497: plasmodesmata-mediated intercellular transport	4.38E-03
106	GO:0043562: cellular response to nitrogen levels	4.38E-03
107	GO:0009699: phenylpropanoid biosynthetic process	4.38E-03
108	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.38E-03
109	GO:0007186: G-protein coupled receptor signaling pathway	4.38E-03
110	GO:0009407: toxin catabolic process	4.48E-03
111	GO:0010119: regulation of stomatal movement	4.69E-03
112	GO:0006865: amino acid transport	4.92E-03
113	GO:0006783: heme biosynthetic process	4.95E-03
114	GO:0009867: jasmonic acid mediated signaling pathway	5.14E-03
115	GO:2000280: regulation of root development	5.56E-03
116	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.56E-03
117	GO:0048268: clathrin coat assembly	5.56E-03
118	GO:0009688: abscisic acid biosynthetic process	6.18E-03
119	GO:0009750: response to fructose	6.84E-03
120	GO:0030148: sphingolipid biosynthetic process	6.84E-03
121	GO:0009636: response to toxic substance	7.45E-03
122	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	7.51E-03
123	GO:0000266: mitochondrial fission	7.51E-03
124	GO:0009651: response to salt stress	7.72E-03
125	GO:0031347: regulation of defense response	8.03E-03
126	GO:0007165: signal transduction	8.44E-03
127	GO:0080167: response to karrikin	9.22E-03
128	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.63E-03
129	GO:0010053: root epidermal cell differentiation	9.69E-03
130	GO:0016192: vesicle-mediated transport	9.83E-03
131	GO:0000162: tryptophan biosynthetic process	1.05E-02
132	GO:0080147: root hair cell development	1.12E-02
133	GO:0009620: response to fungus	1.16E-02
134	GO:0003333: amino acid transmembrane transport	1.29E-02
135	GO:0098542: defense response to other organism	1.29E-02
136	GO:0009742: brassinosteroid mediated signaling pathway	1.35E-02
137	GO:0035428: hexose transmembrane transport	1.37E-02
138	GO:0009814: defense response, incompatible interaction	1.37E-02
139	GO:0010584: pollen exine formation	1.55E-02
140	GO:0042147: retrograde transport, endosome to Golgi	1.64E-02
141	GO:0070417: cellular response to cold	1.64E-02
142	GO:0042391: regulation of membrane potential	1.74E-02
143	GO:0010197: polar nucleus fusion	1.83E-02
144	GO:0046323: glucose import	1.83E-02
145	GO:0008360: regulation of cell shape	1.83E-02
146	GO:0048544: recognition of pollen	1.93E-02
147	GO:0009646: response to absence of light	1.93E-02
148	GO:0009749: response to glucose	2.02E-02
149	GO:0009851: auxin biosynthetic process	2.02E-02
150	GO:0010183: pollen tube guidance	2.02E-02
151	GO:0009873: ethylene-activated signaling pathway	2.09E-02
152	GO:0002229: defense response to oomycetes	2.12E-02
153	GO:0016032: viral process	2.23E-02
154	GO:0019760: glucosinolate metabolic process	2.44E-02
155	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.47E-02
156	GO:0006470: protein dephosphorylation	2.53E-02
157	GO:0006904: vesicle docking involved in exocytosis	2.54E-02
158	GO:0051607: defense response to virus	2.65E-02
159	GO:0001666: response to hypoxia	2.76E-02
160	GO:0006950: response to stress	3.10E-02
161	GO:0015995: chlorophyll biosynthetic process	3.10E-02
162	GO:0008219: cell death	3.34E-02
163	GO:0009817: defense response to fungus, incompatible interaction	3.34E-02
164	GO:0009813: flavonoid biosynthetic process	3.46E-02
165	GO:0006499: N-terminal protein myristoylation	3.58E-02
166	GO:0006970: response to osmotic stress	3.68E-02
167	GO:0045087: innate immune response	3.95E-02
168	GO:0006099: tricarboxylic acid cycle	4.07E-02
169	GO:0006897: endocytosis	4.46E-02
170	GO:0042542: response to hydrogen peroxide	4.59E-02
171	GO:0044550: secondary metabolite biosynthetic process	4.59E-02
172	GO:0009744: response to sucrose	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0005516: calmodulin binding	8.87E-07
5	GO:0005524: ATP binding	1.00E-06
6	GO:0016301: kinase activity	3.69E-06
7	GO:0004674: protein serine/threonine kinase activity	4.59E-06
8	GO:0005388: calcium-transporting ATPase activity	2.58E-05
9	GO:0004190: aspartic-type endopeptidase activity	3.81E-05
10	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.82E-05
11	GO:0004012: phospholipid-translocating ATPase activity	1.10E-04
12	GO:0004656: procollagen-proline 4-dioxygenase activity	1.10E-04
13	GO:0005506: iron ion binding	1.25E-04
14	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.85E-04
15	GO:0004325: ferrochelatase activity	2.16E-04
16	GO:2001147: camalexin binding	2.16E-04
17	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.16E-04
18	GO:0090353: polygalacturonase inhibitor activity	2.16E-04
19	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.16E-04
20	GO:2001227: quercitrin binding	2.16E-04
21	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.16E-04
22	GO:1901149: salicylic acid binding	2.16E-04
23	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.16E-04
24	GO:0004713: protein tyrosine kinase activity	3.88E-04
25	GO:0045140: inositol phosphoceramide synthase activity	4.81E-04
26	GO:0004566: beta-glucuronidase activity	4.81E-04
27	GO:0038199: ethylene receptor activity	4.81E-04
28	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.83E-04
29	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	5.93E-04
30	GO:0004148: dihydrolipoyl dehydrogenase activity	7.83E-04
31	GO:0031683: G-protein beta/gamma-subunit complex binding	7.83E-04
32	GO:0004383: guanylate cyclase activity	7.83E-04
33	GO:0016595: glutamate binding	7.83E-04
34	GO:0001664: G-protein coupled receptor binding	7.83E-04
35	GO:0005484: SNAP receptor activity	8.91E-04
36	GO:0031418: L-ascorbic acid binding	9.02E-04
37	GO:0033612: receptor serine/threonine kinase binding	1.09E-03
38	GO:0051740: ethylene binding	1.12E-03
39	GO:0043495: protein anchor	1.48E-03
40	GO:0004031: aldehyde oxidase activity	1.48E-03
41	GO:0050302: indole-3-acetaldehyde oxidase activity	1.48E-03
42	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.89E-03
43	GO:0045431: flavonol synthase activity	1.89E-03
44	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.33E-03
45	GO:0004871: signal transducer activity	2.67E-03
46	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.80E-03
47	GO:0043295: glutathione binding	3.30E-03
48	GO:0008235: metalloexopeptidase activity	3.30E-03
49	GO:0030247: polysaccharide binding	3.67E-03
50	GO:0005507: copper ion binding	3.80E-03
51	GO:0019825: oxygen binding	3.80E-03
52	GO:0004033: aldo-keto reductase (NADP) activity	3.82E-03
53	GO:0004672: protein kinase activity	4.26E-03
54	GO:0003843: 1,3-beta-D-glucan synthase activity	4.38E-03
55	GO:0004630: phospholipase D activity	4.38E-03
56	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.38E-03
57	GO:0050897: cobalt ion binding	4.69E-03
58	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.69E-03
59	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.14E-03
60	GO:0005515: protein binding	5.43E-03
61	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.56E-03
62	GO:0000149: SNARE binding	5.62E-03
63	GO:0004673: protein histidine kinase activity	6.18E-03
64	GO:0005545: 1-phosphatidylinositol binding	6.18E-03
65	GO:0004364: glutathione transferase activity	6.37E-03
66	GO:0004177: aminopeptidase activity	6.84E-03
67	GO:0043531: ADP binding	7.88E-03
68	GO:0000155: phosphorelay sensor kinase activity	8.22E-03
69	GO:0005262: calcium channel activity	8.22E-03
70	GO:0050660: flavin adenine dinucleotide binding	8.44E-03
71	GO:0008061: chitin binding	9.69E-03
72	GO:0051119: sugar transmembrane transporter activity	9.69E-03
73	GO:0030552: cAMP binding	9.69E-03
74	GO:0030553: cGMP binding	9.69E-03
75	GO:0015171: amino acid transmembrane transporter activity	9.91E-03
76	GO:0003954: NADH dehydrogenase activity	1.12E-02
77	GO:0005216: ion channel activity	1.21E-02
78	GO:0004707: MAP kinase activity	1.29E-02
79	GO:0016746: transferase activity, transferring acyl groups	1.31E-02
80	GO:0003924: GTPase activity	1.51E-02
81	GO:0020037: heme binding	1.55E-02
82	GO:0009055: electron carrier activity	1.65E-02
83	GO:0005249: voltage-gated potassium channel activity	1.74E-02
84	GO:0030551: cyclic nucleotide binding	1.74E-02
85	GO:0030276: clathrin binding	1.83E-02
86	GO:0008080: N-acetyltransferase activity	1.83E-02
87	GO:0043565: sequence-specific DNA binding	1.88E-02
88	GO:0008565: protein transporter activity	1.92E-02
89	GO:0005355: glucose transmembrane transporter activity	1.93E-02
90	GO:0004872: receptor activity	2.02E-02
91	GO:0005509: calcium ion binding	2.09E-02
92	GO:0004683: calmodulin-dependent protein kinase activity	3.10E-02
93	GO:0004806: triglyceride lipase activity	3.10E-02
94	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.22E-02
95	GO:0000287: magnesium ion binding	3.36E-02
96	GO:0016491: oxidoreductase activity	3.53E-02
97	GO:0004222: metalloendopeptidase activity	3.58E-02
98	GO:0030145: manganese ion binding	3.70E-02
99	GO:0008233: peptidase activity	4.16E-02
100	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.20E-02
101	GO:0046872: metal ion binding	4.79E-02
102	GO:0051537: 2 iron, 2 sulfur cluster binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.64E-10
2	GO:0016021: integral component of membrane	2.87E-07
3	GO:0009506: plasmodesma	1.54E-04
4	GO:0009504: cell plate	1.87E-04
5	GO:0045252: oxoglutarate dehydrogenase complex	2.16E-04
6	GO:0005911: cell-cell junction	2.16E-04
7	GO:0005901: caveola	4.81E-04
8	GO:0031304: intrinsic component of mitochondrial inner membrane	4.81E-04
9	GO:0005795: Golgi stack	7.34E-04
10	GO:0000164: protein phosphatase type 1 complex	1.89E-03
11	GO:0000148: 1,3-beta-D-glucan synthase complex	4.38E-03
12	GO:0005802: trans-Golgi network	4.67E-03
13	GO:0005887: integral component of plasma membrane	5.45E-03
14	GO:0005783: endoplasmic reticulum	6.08E-03
15	GO:0031201: SNARE complex	6.11E-03
16	GO:0005765: lysosomal membrane	6.84E-03
17	GO:0031012: extracellular matrix	8.22E-03
18	GO:0005834: heterotrimeric G-protein complex	1.13E-02
19	GO:0016020: membrane	1.24E-02
20	GO:0005905: clathrin-coated pit	1.29E-02
21	GO:0031225: anchored component of membrane	1.60E-02
22	GO:0030136: clathrin-coated vesicle	1.64E-02
23	GO:0000145: exocyst	2.23E-02
24	GO:0005774: vacuolar membrane	2.24E-02
25	GO:0046658: anchored component of plasma membrane	2.93E-02
26	GO:0019005: SCF ubiquitin ligase complex	3.34E-02
27	GO:0005789: endoplasmic reticulum membrane	4.37E-02
28	GO:0090406: pollen tube	4.73E-02