co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G41410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002376: immune system process	0.00E+00
2	GO:0030149: sphingolipid catabolic process	0.00E+00
3	GO:0006793: phosphorus metabolic process	0.00E+00
4	GO:0016139: glycoside catabolic process	0.00E+00
5	GO:0072722: response to amitrole	0.00E+00
6	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
7	GO:0045792: negative regulation of cell size	0.00E+00
8	GO:0006784: heme a biosynthetic process	0.00E+00
9	GO:0042430: indole-containing compound metabolic process	0.00E+00
10	GO:0010200: response to chitin	4.27E-07
11	GO:0006461: protein complex assembly	2.12E-05
12	GO:0009814: defense response, incompatible interaction	2.51E-05
13	GO:0046686: response to cadmium ion	4.55E-05
14	GO:0010193: response to ozone	6.69E-05
15	GO:0030163: protein catabolic process	8.16E-05
16	GO:0010482: regulation of epidermal cell division	1.23E-04
17	GO:0080173: male-female gamete recognition during double fertilization	1.23E-04
18	GO:0009962: regulation of flavonoid biosynthetic process	1.23E-04
19	GO:0009816: defense response to bacterium, incompatible interaction	1.26E-04
20	GO:0019752: carboxylic acid metabolic process	2.86E-04
21	GO:0051592: response to calcium ion	2.86E-04
22	GO:0031648: protein destabilization	2.86E-04
23	GO:0071395: cellular response to jasmonic acid stimulus	2.86E-04
24	GO:0019521: D-gluconate metabolic process	2.86E-04
25	GO:0010167: response to nitrate	3.45E-04
26	GO:0034976: response to endoplasmic reticulum stress	3.85E-04
27	GO:0009863: salicylic acid mediated signaling pathway	4.26E-04
28	GO:0034051: negative regulation of plant-type hypersensitive response	4.72E-04
29	GO:0010351: lithium ion transport	4.72E-04
30	GO:0009410: response to xenobiotic stimulus	4.72E-04
31	GO:0010272: response to silver ion	4.72E-04
32	GO:0045039: protein import into mitochondrial inner membrane	4.72E-04
33	GO:0048281: inflorescence morphogenesis	4.72E-04
34	GO:0010581: regulation of starch biosynthetic process	4.72E-04
35	GO:0001944: vasculature development	6.14E-04
36	GO:0009626: plant-type hypersensitive response	6.55E-04
37	GO:0006882: cellular zinc ion homeostasis	6.76E-04
38	GO:0001676: long-chain fatty acid metabolic process	6.76E-04
39	GO:0006515: misfolded or incompletely synthesized protein catabolic process	6.76E-04
40	GO:0045454: cell redox homeostasis	7.65E-04
41	GO:0006511: ubiquitin-dependent protein catabolic process	8.83E-04
42	GO:0010188: response to microbial phytotoxin	8.97E-04
43	GO:0080037: negative regulation of cytokinin-activated signaling pathway	8.97E-04
44	GO:0006621: protein retention in ER lumen	8.97E-04
45	GO:0051567: histone H3-K9 methylation	8.97E-04
46	GO:0051205: protein insertion into membrane	8.97E-04
47	GO:2000762: regulation of phenylpropanoid metabolic process	1.13E-03
48	GO:0006564: L-serine biosynthetic process	1.13E-03
49	GO:0010405: arabinogalactan protein metabolic process	1.39E-03
50	GO:0043248: proteasome assembly	1.39E-03
51	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.39E-03
52	GO:0010150: leaf senescence	1.50E-03
53	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.73E-03
54	GO:0006979: response to oxidative stress	1.79E-03
55	GO:0030026: cellular manganese ion homeostasis	1.95E-03
56	GO:0071446: cellular response to salicylic acid stimulus	1.95E-03
57	GO:1900056: negative regulation of leaf senescence	1.95E-03
58	GO:0006605: protein targeting	2.26E-03
59	GO:0050821: protein stabilization	2.26E-03
60	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.26E-03
61	GO:0030162: regulation of proteolysis	2.26E-03
62	GO:0030968: endoplasmic reticulum unfolded protein response	2.58E-03
63	GO:0043562: cellular response to nitrogen levels	2.58E-03
64	GO:0006189: 'de novo' IMP biosynthetic process	2.91E-03
65	GO:0009056: catabolic process	2.91E-03
66	GO:0046685: response to arsenic-containing substance	2.91E-03
67	GO:0009051: pentose-phosphate shunt, oxidative branch	2.91E-03
68	GO:0006098: pentose-phosphate shunt	2.91E-03
69	GO:0043067: regulation of programmed cell death	3.26E-03
70	GO:0030042: actin filament depolymerization	3.26E-03
71	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.26E-03
72	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.62E-03
73	GO:0006032: chitin catabolic process	3.62E-03
74	GO:0055062: phosphate ion homeostasis	3.62E-03
75	GO:0000272: polysaccharide catabolic process	4.00E-03
76	GO:0048765: root hair cell differentiation	4.00E-03
77	GO:0015770: sucrose transport	4.00E-03
78	GO:0006952: defense response	4.13E-03
79	GO:0051603: proteolysis involved in cellular protein catabolic process	4.25E-03
80	GO:0015706: nitrate transport	4.39E-03
81	GO:0009651: response to salt stress	4.57E-03
82	GO:0006006: glucose metabolic process	4.79E-03
83	GO:0007034: vacuolar transport	5.20E-03
84	GO:0002237: response to molecule of bacterial origin	5.20E-03
85	GO:0010053: root epidermal cell differentiation	5.63E-03
86	GO:0006874: cellular calcium ion homeostasis	6.98E-03
87	GO:0010026: trichome differentiation	6.98E-03
88	GO:0042742: defense response to bacterium	7.25E-03
89	GO:0016998: cell wall macromolecule catabolic process	7.45E-03
90	GO:0007005: mitochondrion organization	7.93E-03
91	GO:0031348: negative regulation of defense response	7.93E-03
92	GO:0035428: hexose transmembrane transport	7.93E-03
93	GO:0009411: response to UV	8.43E-03
94	GO:0009625: response to insect	8.43E-03
95	GO:0006468: protein phosphorylation	8.43E-03
96	GO:0009790: embryo development	8.52E-03
97	GO:0010091: trichome branching	8.93E-03
98	GO:0019722: calcium-mediated signaling	8.93E-03
99	GO:0042631: cellular response to water deprivation	9.99E-03
100	GO:0015031: protein transport	1.04E-02
101	GO:0006520: cellular amino acid metabolic process	1.05E-02
102	GO:0006662: glycerol ether metabolic process	1.05E-02
103	GO:0048868: pollen tube development	1.05E-02
104	GO:0046323: glucose import	1.05E-02
105	GO:0006814: sodium ion transport	1.11E-02
106	GO:0009646: response to absence of light	1.11E-02
107	GO:0009611: response to wounding	1.19E-02
108	GO:0009617: response to bacterium	1.20E-02
109	GO:0000302: response to reactive oxygen species	1.22E-02
110	GO:0051301: cell division	1.29E-02
111	GO:0045893: positive regulation of transcription, DNA-templated	1.38E-02
112	GO:0009567: double fertilization forming a zygote and endosperm	1.40E-02
113	GO:0009615: response to virus	1.58E-02
114	GO:0009627: systemic acquired resistance	1.71E-02
115	GO:0042128: nitrate assimilation	1.71E-02
116	GO:0008219: cell death	1.91E-02
117	GO:0016192: vesicle-mediated transport	2.04E-02
118	GO:0046777: protein autophosphorylation	2.08E-02
119	GO:0010043: response to zinc ion	2.12E-02
120	GO:0009737: response to abscisic acid	2.26E-02
121	GO:0034599: cellular response to oxidative stress	2.34E-02
122	GO:0006631: fatty acid metabolic process	2.56E-02
123	GO:0042542: response to hydrogen peroxide	2.63E-02
124	GO:0051707: response to other organism	2.71E-02
125	GO:0009644: response to high light intensity	2.87E-02
126	GO:0008643: carbohydrate transport	2.87E-02
127	GO:0009965: leaf morphogenesis	2.95E-02
128	GO:0031347: regulation of defense response	3.11E-02
129	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.11E-02
130	GO:0006812: cation transport	3.19E-02
131	GO:0009846: pollen germination	3.19E-02
132	GO:0006486: protein glycosylation	3.35E-02
133	GO:0009909: regulation of flower development	3.60E-02
134	GO:0009873: ethylene-activated signaling pathway	3.70E-02
135	GO:0048316: seed development	3.86E-02
136	GO:0016569: covalent chromatin modification	4.13E-02
137	GO:0009553: embryo sac development	4.22E-02
138	GO:0009624: response to nematode	4.31E-02
139	GO:0018105: peptidyl-serine phosphorylation	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0005046: KDEL sequence binding	0.00E+00
2	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
3	GO:0004298: threonine-type endopeptidase activity	2.16E-05
4	GO:0008233: peptidase activity	7.50E-05
5	GO:0004638: phosphoribosylaminoimidazole carboxylase activity	1.23E-04
6	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.23E-04
7	GO:0003746: translation elongation factor activity	2.37E-04
8	GO:0001671: ATPase activator activity	2.86E-04
9	GO:0080041: ADP-ribose pyrophosphohydrolase activity	2.86E-04
10	GO:0010296: prenylcysteine methylesterase activity	2.86E-04
11	GO:0004617: phosphoglycerate dehydrogenase activity	2.86E-04
12	GO:0017110: nucleoside-diphosphatase activity	2.86E-04
13	GO:0046593: mandelonitrile lyase activity	2.86E-04
14	GO:0070361: mitochondrial light strand promoter anti-sense binding	2.86E-04
15	GO:0005515: protein binding	5.20E-04
16	GO:0003756: protein disulfide isomerase activity	6.66E-04
17	GO:0005524: ATP binding	7.13E-04
18	GO:0015368: calcium:cation antiporter activity	8.97E-04
19	GO:0004345: glucose-6-phosphate dehydrogenase activity	8.97E-04
20	GO:0015369: calcium:proton antiporter activity	8.97E-04
21	GO:0046923: ER retention sequence binding	8.97E-04
22	GO:0047631: ADP-ribose diphosphatase activity	1.13E-03
23	GO:0015145: monosaccharide transmembrane transporter activity	1.13E-03
24	GO:0008237: metallopeptidase activity	1.30E-03
25	GO:0000210: NAD+ diphosphatase activity	1.39E-03
26	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.39E-03
27	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.66E-03
28	GO:0004656: procollagen-proline 4-dioxygenase activity	1.66E-03
29	GO:0102391: decanoate--CoA ligase activity	1.66E-03
30	GO:0008320: protein transmembrane transporter activity	1.95E-03
31	GO:0004467: long-chain fatty acid-CoA ligase activity	1.95E-03
32	GO:0016831: carboxy-lyase activity	1.95E-03
33	GO:0008506: sucrose:proton symporter activity	1.95E-03
34	GO:0042802: identical protein binding	2.03E-03
35	GO:0015491: cation:cation antiporter activity	2.26E-03
36	GO:0035064: methylated histone binding	2.26E-03
37	GO:0008135: translation factor activity, RNA binding	2.58E-03
38	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.91E-03
39	GO:0015112: nitrate transmembrane transporter activity	3.26E-03
40	GO:0005198: structural molecule activity	3.43E-03
41	GO:0004568: chitinase activity	3.62E-03
42	GO:0004713: protein tyrosine kinase activity	3.62E-03
43	GO:0051287: NAD binding	3.69E-03
44	GO:0008794: arsenate reductase (glutaredoxin) activity	4.00E-03
45	GO:0008378: galactosyltransferase activity	4.39E-03
46	GO:0005525: GTP binding	5.29E-03
47	GO:0008061: chitin binding	5.63E-03
48	GO:0015035: protein disulfide oxidoreductase activity	6.00E-03
49	GO:0031418: L-ascorbic acid binding	6.51E-03
50	GO:0016787: hydrolase activity	6.71E-03
51	GO:0051087: chaperone binding	6.98E-03
52	GO:0043424: protein histidine kinase binding	6.98E-03
53	GO:0016758: transferase activity, transferring hexosyl groups	7.11E-03
54	GO:0004176: ATP-dependent peptidase activity	7.45E-03
55	GO:0022891: substrate-specific transmembrane transporter activity	8.43E-03
56	GO:0047134: protein-disulfide reductase activity	9.45E-03
57	GO:0016887: ATPase activity	9.76E-03
58	GO:0004527: exonuclease activity	1.05E-02
59	GO:0004791: thioredoxin-disulfide reductase activity	1.11E-02
60	GO:0016853: isomerase activity	1.11E-02
61	GO:0005355: glucose transmembrane transporter activity	1.11E-02
62	GO:0004872: receptor activity	1.16E-02
63	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.34E-02
64	GO:0016597: amino acid binding	1.52E-02
65	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.71E-02
66	GO:0043531: ADP binding	1.72E-02
67	GO:0004683: calmodulin-dependent protein kinase activity	1.78E-02
68	GO:0008236: serine-type peptidase activity	1.85E-02
69	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.91E-02
70	GO:0061630: ubiquitin protein ligase activity	2.04E-02
71	GO:0004222: metalloendopeptidase activity	2.05E-02
72	GO:0050897: cobalt ion binding	2.12E-02
73	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.26E-02
74	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.41E-02
75	GO:0004871: signal transducer activity	2.44E-02
76	GO:0050661: NADP binding	2.48E-02
77	GO:0004674: protein serine/threonine kinase activity	2.80E-02
78	GO:0003924: GTPase activity	2.87E-02
79	GO:0016298: lipase activity	3.44E-02
80	GO:0031625: ubiquitin protein ligase binding	3.60E-02
81	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.04E-02
82	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.04E-02
83	GO:0016301: kinase activity	4.19E-02
84	GO:0003779: actin binding	4.22E-02
85	GO:0004672: protein kinase activity	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
3	GO:0000502: proteasome complex	1.80E-06
4	GO:0005783: endoplasmic reticulum	2.20E-06
5	GO:0005839: proteasome core complex	2.16E-05
6	GO:0005801: cis-Golgi network	4.51E-05
7	GO:0005886: plasma membrane	5.66E-05
8	GO:0072546: ER membrane protein complex	1.23E-04
9	GO:0005829: cytosol	1.49E-04
10	GO:0008541: proteasome regulatory particle, lid subcomplex	2.05E-04
11	GO:0005789: endoplasmic reticulum membrane	2.34E-04
12	GO:0030134: ER to Golgi transport vesicle	2.86E-04
13	GO:0030139: endocytic vesicle	4.72E-04
14	GO:0005622: intracellular	1.40E-03
15	GO:0000326: protein storage vacuole	2.58E-03
16	GO:0019773: proteasome core complex, alpha-subunit complex	2.58E-03
17	GO:0005740: mitochondrial envelope	3.62E-03
18	GO:0031012: extracellular matrix	4.79E-03
19	GO:0005774: vacuolar membrane	4.86E-03
20	GO:0005741: mitochondrial outer membrane	7.45E-03
21	GO:0005623: cell	7.49E-03
22	GO:0015629: actin cytoskeleton	8.43E-03
23	GO:0016021: integral component of membrane	9.80E-03
24	GO:0005788: endoplasmic reticulum lumen	1.65E-02
25	GO:0048046: apoplast	1.68E-02
26	GO:0005643: nuclear pore	1.91E-02
27	GO:0019005: SCF ubiquitin ligase complex	1.91E-02
28	GO:0005794: Golgi apparatus	2.09E-02
29	GO:0005819: spindle	2.41E-02
30	GO:0031902: late endosome membrane	2.56E-02
31	GO:0005743: mitochondrial inner membrane	2.67E-02
32	GO:0005773: vacuole	3.17E-02
33	GO:0005635: nuclear envelope	3.52E-02
34	GO:0009505: plant-type cell wall	3.73E-02
35	GO:0005834: heterotrimeric G-protein complex	3.95E-02