Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G41330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:0009751: response to salicylic acid4.81E-08
3GO:0009753: response to jasmonic acid1.51E-06
4GO:0010200: response to chitin9.24E-06
5GO:0030162: regulation of proteolysis2.62E-05
6GO:0009873: ethylene-activated signaling pathway3.93E-05
7GO:0033481: galacturonate biosynthetic process6.10E-05
8GO:0051973: positive regulation of telomerase activity6.10E-05
9GO:0080164: regulation of nitric oxide metabolic process6.10E-05
10GO:0055063: sulfate ion homeostasis6.10E-05
11GO:0046500: S-adenosylmethionine metabolic process6.10E-05
12GO:0019354: siroheme biosynthetic process6.10E-05
13GO:0042542: response to hydrogen peroxide8.43E-05
14GO:0009409: response to cold9.55E-05
15GO:0034605: cellular response to heat1.14E-04
16GO:0071497: cellular response to freezing1.48E-04
17GO:0051592: response to calcium ion1.48E-04
18GO:2000022: regulation of jasmonic acid mediated signaling pathway2.21E-04
19GO:0010581: regulation of starch biosynthetic process2.51E-04
20GO:0006556: S-adenosylmethionine biosynthetic process2.51E-04
21GO:0019722: calcium-mediated signaling2.64E-04
22GO:0009737: response to abscisic acid2.69E-04
23GO:0000271: polysaccharide biosynthetic process3.11E-04
24GO:0009741: response to brassinosteroid3.35E-04
25GO:0045489: pectin biosynthetic process3.35E-04
26GO:0009743: response to carbohydrate3.65E-04
27GO:0006357: regulation of transcription from RNA polymerase II promoter3.78E-04
28GO:0006355: regulation of transcription, DNA-templated4.59E-04
29GO:0046345: abscisic acid catabolic process4.88E-04
30GO:0009828: plant-type cell wall loosening4.99E-04
31GO:0007267: cell-cell signaling5.29E-04
32GO:0010438: cellular response to sulfur starvation6.19E-04
33GO:0009164: nucleoside catabolic process6.19E-04
34GO:0006544: glycine metabolic process6.19E-04
35GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.25E-04
36GO:0006563: L-serine metabolic process7.57E-04
37GO:0006555: methionine metabolic process7.57E-04
38GO:0009826: unidimensional cell growth7.63E-04
39GO:0009612: response to mechanical stimulus9.01E-04
40GO:0009723: response to ethylene9.56E-04
41GO:0016051: carbohydrate biosynthetic process9.58E-04
42GO:0051510: regulation of unidimensional cell growth1.05E-03
43GO:0010038: response to metal ion1.05E-03
44GO:0050829: defense response to Gram-negative bacterium1.05E-03
45GO:0010439: regulation of glucosinolate biosynthetic process1.21E-03
46GO:0044030: regulation of DNA methylation1.38E-03
47GO:2000031: regulation of salicylic acid mediated signaling pathway1.38E-03
48GO:0010099: regulation of photomorphogenesis1.38E-03
49GO:0048574: long-day photoperiodism, flowering1.38E-03
50GO:0031347: regulation of defense response1.46E-03
51GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.46E-03
52GO:0009414: response to water deprivation1.65E-03
53GO:0006779: porphyrin-containing compound biosynthetic process1.73E-03
54GO:0035999: tetrahydrofolate interconversion1.73E-03
55GO:0048268: clathrin coat assembly1.73E-03
56GO:0043069: negative regulation of programmed cell death1.92E-03
57GO:0030154: cell differentiation1.94E-03
58GO:0009733: response to auxin2.03E-03
59GO:1903507: negative regulation of nucleic acid-templated transcription2.12E-03
60GO:0000272: polysaccharide catabolic process2.12E-03
61GO:0000038: very long-chain fatty acid metabolic process2.12E-03
62GO:0009698: phenylpropanoid metabolic process2.12E-03
63GO:0016925: protein sumoylation2.32E-03
64GO:0016024: CDP-diacylglycerol biosynthetic process2.32E-03
65GO:0018107: peptidyl-threonine phosphorylation2.52E-03
66GO:0010540: basipetal auxin transport2.74E-03
67GO:0010143: cutin biosynthetic process2.74E-03
68GO:0009225: nucleotide-sugar metabolic process2.96E-03
69GO:0010167: response to nitrate2.96E-03
70GO:0009738: abscisic acid-activated signaling pathway3.34E-03
71GO:0009611: response to wounding3.58E-03
72GO:0019953: sexual reproduction3.65E-03
73GO:0006730: one-carbon metabolic process4.15E-03
74GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.39E-03
75GO:0009411: response to UV4.40E-03
76GO:0040007: growth4.40E-03
77GO:0010584: pollen exine formation4.65E-03
78GO:0010182: sugar mediated signaling pathway5.46E-03
79GO:0010268: brassinosteroid homeostasis5.46E-03
80GO:0009646: response to absence of light5.74E-03
81GO:0009791: post-embryonic development6.03E-03
82GO:0016132: brassinosteroid biosynthetic process6.32E-03
83GO:0002229: defense response to oomycetes6.32E-03
84GO:0006970: response to osmotic stress6.53E-03
85GO:0010583: response to cyclopentenone6.61E-03
86GO:0009639: response to red or far red light7.21E-03
87GO:0016125: sterol metabolic process7.21E-03
88GO:0019760: glucosinolate metabolic process7.21E-03
89GO:0001666: response to hypoxia8.16E-03
90GO:0048573: photoperiodism, flowering9.14E-03
91GO:0016311: dephosphorylation9.47E-03
92GO:0009651: response to salt stress1.07E-02
93GO:0048527: lateral root development1.09E-02
94GO:0006629: lipid metabolic process1.11E-02
95GO:0045087: innate immune response1.16E-02
96GO:0009637: response to blue light1.16E-02
97GO:0006351: transcription, DNA-templated1.28E-02
98GO:0006897: endocytosis1.31E-02
99GO:0046686: response to cadmium ion1.50E-02
100GO:0009734: auxin-activated signaling pathway1.57E-02
101GO:0009664: plant-type cell wall organization1.63E-02
102GO:0009809: lignin biosynthetic process1.71E-02
103GO:0009585: red, far-red light phototransduction1.71E-02
104GO:0009909: regulation of flower development1.84E-02
105GO:0035556: intracellular signal transduction2.09E-02
106GO:0009553: embryo sac development2.15E-02
107GO:0018105: peptidyl-serine phosphorylation2.25E-02
108GO:0045893: positive regulation of transcription, DNA-templated2.27E-02
109GO:0009742: brassinosteroid mediated signaling pathway2.29E-02
110GO:0042744: hydrogen peroxide catabolic process2.83E-02
111GO:0006633: fatty acid biosynthetic process3.04E-02
112GO:0040008: regulation of growth3.14E-02
113GO:0007623: circadian rhythm3.25E-02
114GO:0016567: protein ubiquitination3.46E-02
115GO:0009739: response to gibberellin3.52E-02
116GO:0006468: protein phosphorylation3.69E-02
117GO:0071555: cell wall organization4.00E-02
118GO:0009658: chloroplast organization4.43E-02
119GO:0009860: pollen tube growth4.67E-02
120GO:0048366: leaf development4.97E-02
RankGO TermAdjusted P value
1GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
2GO:0080132: fatty acid alpha-hydroxylase activity6.10E-05
3GO:0003712: transcription cofactor activity1.30E-04
4GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.69E-04
5GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.03E-04
6GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.21E-04
7GO:0010295: (+)-abscisic acid 8'-hydroxylase activity2.51E-04
8GO:0004478: methionine adenosyltransferase activity2.51E-04
9GO:0004402: histone acetyltransferase activity3.11E-04
10GO:0044212: transcription regulatory region DNA binding3.26E-04
11GO:0050378: UDP-glucuronate 4-epimerase activity4.88E-04
12GO:0004372: glycine hydroxymethyltransferase activity6.19E-04
13GO:0031386: protein tag6.19E-04
14GO:0003700: transcription factor activity, sequence-specific DNA binding7.35E-04
15GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity7.57E-04
16GO:0004366: glycerol-3-phosphate O-acyltransferase activity7.57E-04
17GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides9.01E-04
18GO:0016161: beta-amylase activity9.01E-04
19GO:0005516: calmodulin binding1.09E-03
20GO:0016207: 4-coumarate-CoA ligase activity1.55E-03
21GO:0043565: sequence-specific DNA binding1.57E-03
22GO:0031625: ubiquitin protein ligase binding1.79E-03
23GO:0005545: 1-phosphatidylinositol binding1.92E-03
24GO:0016758: transferase activity, transferring hexosyl groups2.79E-03
25GO:0003677: DNA binding3.03E-03
26GO:0003714: transcription corepressor activity3.42E-03
27GO:0030276: clathrin binding5.46E-03
28GO:0016791: phosphatase activity7.21E-03
29GO:0004806: triglyceride lipase activity9.14E-03
30GO:0004871: signal transducer activity9.43E-03
31GO:0004672: protein kinase activity1.39E-02
32GO:0016298: lipase activity1.76E-02
33GO:0004674: protein serine/threonine kinase activity1.90E-02
34GO:0016874: ligase activity2.11E-02
35GO:0016746: transferase activity, transferring acyl groups2.25E-02
36GO:0030170: pyridoxal phosphate binding2.78E-02
37GO:0005506: iron ion binding3.93E-02
38GO:0016757: transferase activity, transferring glycosyl groups3.97E-02
39GO:0008168: methyltransferase activity4.31E-02
40GO:0003824: catalytic activity4.38E-02
41GO:0004601: peroxidase activity4.43E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0005615: extracellular space5.34E-04
3GO:0019005: SCF ubiquitin ligase complex7.65E-04
4GO:0005794: Golgi apparatus2.15E-03
5GO:0009505: plant-type cell wall2.40E-03
6GO:0048046: apoplast3.17E-03
7GO:0005905: clathrin-coated pit3.89E-03
8GO:0015629: actin cytoskeleton4.40E-03
9GO:0030136: clathrin-coated vesicle4.92E-03
10GO:0032580: Golgi cisterna membrane7.21E-03
11GO:0009506: plasmodesma1.01E-02
12GO:0005886: plasma membrane2.59E-02
13GO:0005576: extracellular region3.19E-02
14GO:0005618: cell wall4.78E-02
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Gene type



Gene DE type