Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G40540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
3GO:0042821: pyridoxal biosynthetic process0.00E+00
4GO:0005996: monosaccharide metabolic process0.00E+00
5GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
6GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
7GO:0070125: mitochondrial translational elongation0.00E+00
8GO:0090042: tubulin deacetylation0.00E+00
9GO:0045176: apical protein localization0.00E+00
10GO:0006223: uracil salvage0.00E+00
11GO:0006429: leucyl-tRNA aminoacylation0.00E+00
12GO:0030388: fructose 1,6-bisphosphate metabolic process0.00E+00
13GO:0016553: base conversion or substitution editing0.00E+00
14GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
15GO:0042820: vitamin B6 catabolic process0.00E+00
16GO:0002184: cytoplasmic translational termination0.00E+00
17GO:0043972: histone H3-K23 acetylation0.00E+00
18GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
19GO:0044154: histone H3-K14 acetylation0.00E+00
20GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
21GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
22GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
23GO:0042371: vitamin K biosynthetic process0.00E+00
24GO:0061635: regulation of protein complex stability0.00E+00
25GO:0032544: plastid translation2.93E-16
26GO:0009773: photosynthetic electron transport in photosystem I3.43E-12
27GO:0015979: photosynthesis1.35E-10
28GO:0009658: chloroplast organization1.41E-09
29GO:0010027: thylakoid membrane organization4.41E-08
30GO:0006412: translation2.72E-07
31GO:0006000: fructose metabolic process6.09E-07
32GO:0009735: response to cytokinin1.27E-06
33GO:0042254: ribosome biogenesis1.40E-06
34GO:0010196: nonphotochemical quenching1.90E-06
35GO:0055114: oxidation-reduction process6.52E-06
36GO:0006546: glycine catabolic process7.81E-06
37GO:0016117: carotenoid biosynthetic process2.54E-05
38GO:1902326: positive regulation of chlorophyll biosynthetic process3.28E-05
39GO:0006094: gluconeogenesis4.33E-05
40GO:0010207: photosystem II assembly5.55E-05
41GO:0019253: reductive pentose-phosphate cycle5.55E-05
42GO:0009409: response to cold9.78E-05
43GO:0006518: peptide metabolic process1.03E-04
44GO:0009657: plastid organization1.48E-04
45GO:0006002: fructose 6-phosphate metabolic process1.48E-04
46GO:0071482: cellular response to light stimulus1.48E-04
47GO:0015995: chlorophyll biosynthetic process1.93E-04
48GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.10E-04
49GO:0018298: protein-chromophore linkage2.38E-04
50GO:0006633: fatty acid biosynthetic process2.85E-04
51GO:0006096: glycolytic process3.07E-04
52GO:0042335: cuticle development3.15E-04
53GO:0045727: positive regulation of translation3.49E-04
54GO:0016123: xanthophyll biosynthetic process5.17E-04
55GO:0032543: mitochondrial translation5.17E-04
56GO:0010236: plastoquinone biosynthetic process5.17E-04
57GO:0045038: protein import into chloroplast thylakoid membrane5.17E-04
58GO:0009767: photosynthetic electron transport chain5.42E-04
59GO:0005986: sucrose biosynthetic process5.42E-04
60GO:0009416: response to light stimulus6.05E-04
61GO:0010020: chloroplast fission6.36E-04
62GO:0042549: photosystem II stabilization7.14E-04
63GO:0010190: cytochrome b6f complex assembly7.14E-04
64GO:0006086: acetyl-CoA biosynthetic process from pyruvate7.14E-04
65GO:0010025: wax biosynthetic process8.50E-04
66GO:0043971: histone H3-K18 acetylation8.91E-04
67GO:1902458: positive regulation of stomatal opening8.91E-04
68GO:0009443: pyridoxal 5'-phosphate salvage8.91E-04
69GO:0034337: RNA folding8.91E-04
70GO:0071277: cellular response to calcium ion8.91E-04
71GO:0070509: calcium ion import8.91E-04
72GO:0007263: nitric oxide mediated signal transduction8.91E-04
73GO:0043489: RNA stabilization8.91E-04
74GO:0071588: hydrogen peroxide mediated signaling pathway8.91E-04
75GO:0060627: regulation of vesicle-mediated transport8.91E-04
76GO:1904966: positive regulation of vitamin E biosynthetic process8.91E-04
77GO:0000481: maturation of 5S rRNA8.91E-04
78GO:1904964: positive regulation of phytol biosynthetic process8.91E-04
79GO:0033481: galacturonate biosynthetic process8.91E-04
80GO:0043087: regulation of GTPase activity8.91E-04
81GO:0042026: protein refolding9.42E-04
82GO:1901259: chloroplast rRNA processing9.42E-04
83GO:0042372: phylloquinone biosynthetic process9.42E-04
84GO:0006810: transport9.56E-04
85GO:0061077: chaperone-mediated protein folding1.24E-03
86GO:0009704: de-etiolation1.50E-03
87GO:0008610: lipid biosynthetic process1.50E-03
88GO:0080183: response to photooxidative stress1.94E-03
89GO:0006729: tetrahydrobiopterin biosynthetic process1.94E-03
90GO:0034755: iron ion transmembrane transport1.94E-03
91GO:1903426: regulation of reactive oxygen species biosynthetic process1.94E-03
92GO:0080005: photosystem stoichiometry adjustment1.94E-03
93GO:0010270: photosystem II oxygen evolving complex assembly1.94E-03
94GO:0010275: NAD(P)H dehydrogenase complex assembly1.94E-03
95GO:0009853: photorespiration1.94E-03
96GO:0009662: etioplast organization1.94E-03
97GO:0097054: L-glutamate biosynthetic process1.94E-03
98GO:1904143: positive regulation of carotenoid biosynthetic process1.94E-03
99GO:0045036: protein targeting to chloroplast3.06E-03
100GO:0010581: regulation of starch biosynthetic process3.21E-03
101GO:2001295: malonyl-CoA biosynthetic process3.21E-03
102GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition3.21E-03
103GO:0090391: granum assembly3.21E-03
104GO:0090506: axillary shoot meristem initiation3.21E-03
105GO:0051604: protein maturation3.21E-03
106GO:0006696: ergosterol biosynthetic process3.21E-03
107GO:0006457: protein folding3.34E-03
108GO:0032502: developmental process3.37E-03
109GO:0006415: translational termination3.55E-03
110GO:0043085: positive regulation of catalytic activity3.55E-03
111GO:0000038: very long-chain fatty acid metabolic process3.55E-03
112GO:0006352: DNA-templated transcription, initiation3.55E-03
113GO:0018119: peptidyl-cysteine S-nitrosylation3.55E-03
114GO:0045037: protein import into chloroplast stroma4.07E-03
115GO:0006006: glucose metabolic process4.64E-03
116GO:0006165: nucleoside diphosphate phosphorylation4.68E-03
117GO:0006228: UTP biosynthetic process4.68E-03
118GO:0006537: glutamate biosynthetic process4.68E-03
119GO:0016556: mRNA modification4.68E-03
120GO:0010731: protein glutathionylation4.68E-03
121GO:0006424: glutamyl-tRNA aminoacylation4.68E-03
122GO:1901332: negative regulation of lateral root development4.68E-03
123GO:0051085: chaperone mediated protein folding requiring cofactor4.68E-03
124GO:0009152: purine ribonucleotide biosynthetic process4.68E-03
125GO:0046653: tetrahydrofolate metabolic process4.68E-03
126GO:0043572: plastid fission4.68E-03
127GO:0006241: CTP biosynthetic process4.68E-03
128GO:0055070: copper ion homeostasis4.68E-03
129GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis4.68E-03
130GO:2001141: regulation of RNA biosynthetic process4.68E-03
131GO:0090351: seedling development5.89E-03
132GO:0006808: regulation of nitrogen utilization6.33E-03
133GO:0044206: UMP salvage6.33E-03
134GO:2000122: negative regulation of stomatal complex development6.33E-03
135GO:0019676: ammonia assimilation cycle6.33E-03
136GO:0015976: carbon utilization6.33E-03
137GO:0031122: cytoplasmic microtubule organization6.33E-03
138GO:0051781: positive regulation of cell division6.33E-03
139GO:0019464: glycine decarboxylation via glycine cleavage system6.33E-03
140GO:0009765: photosynthesis, light harvesting6.33E-03
141GO:0071483: cellular response to blue light6.33E-03
142GO:0006183: GTP biosynthetic process6.33E-03
143GO:0015994: chlorophyll metabolic process6.33E-03
144GO:0010037: response to carbon dioxide6.33E-03
145GO:0006636: unsaturated fatty acid biosynthetic process6.58E-03
146GO:0045454: cell redox homeostasis7.23E-03
147GO:0019344: cysteine biosynthetic process7.31E-03
148GO:0007017: microtubule-based process8.09E-03
149GO:0009768: photosynthesis, light harvesting in photosystem I8.09E-03
150GO:0006418: tRNA aminoacylation for protein translation8.09E-03
151GO:0031365: N-terminal protein amino acid modification8.17E-03
152GO:0035434: copper ion transmembrane transport8.17E-03
153GO:0006461: protein complex assembly8.17E-03
154GO:0009107: lipoate biosynthetic process8.17E-03
155GO:0016120: carotene biosynthetic process8.17E-03
156GO:0080110: sporopollenin biosynthetic process8.17E-03
157GO:0006656: phosphatidylcholine biosynthetic process8.17E-03
158GO:0043097: pyrimidine nucleoside salvage8.17E-03
159GO:0006564: L-serine biosynthetic process8.17E-03
160GO:0009793: embryo development ending in seed dormancy9.09E-03
161GO:0080092: regulation of pollen tube growth9.77E-03
162GO:0006730: one-carbon metabolic process9.77E-03
163GO:0009920: cell plate formation involved in plant-type cell wall biogenesis1.02E-02
164GO:0006828: manganese ion transport1.02E-02
165GO:0010405: arabinogalactan protein metabolic process1.02E-02
166GO:0006206: pyrimidine nucleobase metabolic process1.02E-02
167GO:0048827: phyllome development1.02E-02
168GO:0032973: amino acid export1.02E-02
169GO:0009913: epidermal cell differentiation1.02E-02
170GO:0018258: protein O-linked glycosylation via hydroxyproline1.02E-02
171GO:0006655: phosphatidylglycerol biosynthetic process1.02E-02
172GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.02E-02
173GO:0000470: maturation of LSU-rRNA1.02E-02
174GO:0006555: methionine metabolic process1.02E-02
175GO:0006014: D-ribose metabolic process1.02E-02
176GO:0010358: leaf shaping1.02E-02
177GO:0009306: protein secretion1.16E-02
178GO:0010067: procambium histogenesis1.23E-02
179GO:0010019: chloroplast-nucleus signaling pathway1.23E-02
180GO:0010555: response to mannitol1.23E-02
181GO:0006458: 'de novo' protein folding1.23E-02
182GO:0009955: adaxial/abaxial pattern specification1.23E-02
183GO:0006694: steroid biosynthetic process1.23E-02
184GO:0030488: tRNA methylation1.23E-02
185GO:0010189: vitamin E biosynthetic process1.23E-02
186GO:0009854: oxidative photosynthetic carbon pathway1.23E-02
187GO:0000413: protein peptidyl-prolyl isomerization1.37E-02
188GO:0046686: response to cadmium ion1.41E-02
189GO:0050829: defense response to Gram-negative bacterium1.46E-02
190GO:0009645: response to low light intensity stimulus1.46E-02
191GO:0009772: photosynthetic electron transport in photosystem II1.46E-02
192GO:0043090: amino acid import1.46E-02
193GO:0006400: tRNA modification1.46E-02
194GO:0030497: fatty acid elongation1.46E-02
195GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.46E-02
196GO:0009741: response to brassinosteroid1.48E-02
197GO:0009642: response to light intensity1.71E-02
198GO:0042255: ribosome assembly1.71E-02
199GO:0006353: DNA-templated transcription, termination1.71E-02
200GO:0007155: cell adhesion1.71E-02
201GO:0048564: photosystem I assembly1.71E-02
202GO:0006605: protein targeting1.71E-02
203GO:0032508: DNA duplex unwinding1.71E-02
204GO:2000070: regulation of response to water deprivation1.71E-02
205GO:0019252: starch biosynthetic process1.71E-02
206GO:0008654: phospholipid biosynthetic process1.71E-02
207GO:0045010: actin nucleation1.71E-02
208GO:0010492: maintenance of shoot apical meristem identity1.71E-02
209GO:0016132: brassinosteroid biosynthetic process1.83E-02
210GO:0006364: rRNA processing1.94E-02
211GO:0007186: G-protein coupled receptor signaling pathway1.96E-02
212GO:0017004: cytochrome complex assembly1.96E-02
213GO:0009808: lignin metabolic process1.96E-02
214GO:0019430: removal of superoxide radicals1.96E-02
215GO:0007264: small GTPase mediated signal transduction1.96E-02
216GO:0015996: chlorophyll catabolic process1.96E-02
217GO:0006075: (1->3)-beta-D-glucan biosynthetic process1.96E-02
218GO:0044030: regulation of DNA methylation1.96E-02
219GO:0006508: proteolysis2.07E-02
220GO:0010090: trichome morphogenesis2.09E-02
221GO:0000902: cell morphogenesis2.23E-02
222GO:0048507: meristem development2.23E-02
223GO:0090305: nucleic acid phosphodiester bond hydrolysis2.23E-02
224GO:0010206: photosystem II repair2.23E-02
225GO:0080144: amino acid homeostasis2.23E-02
226GO:0090333: regulation of stomatal closure2.23E-02
227GO:0009051: pentose-phosphate shunt, oxidative branch2.23E-02
228GO:0000373: Group II intron splicing2.23E-02
229GO:0006098: pentose-phosphate shunt2.23E-02
230GO:0042742: defense response to bacterium2.42E-02
231GO:0010380: regulation of chlorophyll biosynthetic process2.52E-02
232GO:0042761: very long-chain fatty acid biosynthetic process2.52E-02
233GO:0010205: photoinhibition2.52E-02
234GO:0006779: porphyrin-containing compound biosynthetic process2.52E-02
235GO:0035999: tetrahydrofolate interconversion2.52E-02
236GO:1900865: chloroplast RNA modification2.52E-02
237GO:0006869: lipid transport2.53E-02
238GO:0048829: root cap development2.81E-02
239GO:0006782: protoporphyrinogen IX biosynthetic process2.81E-02
240GO:0019538: protein metabolic process2.81E-02
241GO:0006535: cysteine biosynthetic process from serine2.81E-02
242GO:0019684: photosynthesis, light reaction3.12E-02
243GO:0009089: lysine biosynthetic process via diaminopimelate3.12E-02
244GO:0009073: aromatic amino acid family biosynthetic process3.12E-02
245GO:0006879: cellular iron ion homeostasis3.12E-02
246GO:0000272: polysaccharide catabolic process3.12E-02
247GO:0009750: response to fructose3.12E-02
248GO:0006816: calcium ion transport3.12E-02
249GO:0016311: dephosphorylation3.30E-02
250GO:0005983: starch catabolic process3.44E-02
251GO:0016024: CDP-diacylglycerol biosynthetic process3.44E-02
252GO:0009817: defense response to fungus, incompatible interaction3.47E-02
253GO:0010229: inflorescence development3.76E-02
254GO:0030036: actin cytoskeleton organization3.76E-02
255GO:0010102: lateral root morphogenesis3.76E-02
256GO:0009718: anthocyanin-containing compound biosynthetic process3.76E-02
257GO:0009725: response to hormone3.76E-02
258GO:0010628: positive regulation of gene expression3.76E-02
259GO:0009631: cold acclimation4.00E-02
260GO:0010540: basipetal auxin transport4.10E-02
261GO:0010143: cutin biosynthetic process4.10E-02
262GO:0010223: secondary shoot formation4.10E-02
263GO:0009637: response to blue light4.39E-02
264GO:0016051: carbohydrate biosynthetic process4.39E-02
265GO:0080188: RNA-directed DNA methylation4.45E-02
266GO:0005985: sucrose metabolic process4.45E-02
267GO:0009225: nucleotide-sugar metabolic process4.45E-02
268GO:0034599: cellular response to oxidative stress4.58E-02
269GO:0042744: hydrogen peroxide catabolic process4.68E-02
270GO:0019762: glucosinolate catabolic process4.80E-02
271GO:0009790: embryo development4.82E-02
272GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.93E-02
RankGO TermAdjusted P value
1GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
2GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
3GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
4GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
5GO:0051721: protein phosphatase 2A binding0.00E+00
6GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
7GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
8GO:0042903: tubulin deacetylase activity0.00E+00
9GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
10GO:0045435: lycopene epsilon cyclase activity0.00E+00
11GO:0004822: isoleucine-tRNA ligase activity0.00E+00
12GO:0051738: xanthophyll binding0.00E+00
13GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
14GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
15GO:0046905: phytoene synthase activity0.00E+00
16GO:0008887: glycerate kinase activity0.00E+00
17GO:0005048: signal sequence binding0.00E+00
18GO:0046608: carotenoid isomerase activity0.00E+00
19GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
20GO:0050614: delta24-sterol reductase activity0.00E+00
21GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
22GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
23GO:0043014: alpha-tubulin binding0.00E+00
24GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
25GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
26GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity0.00E+00
27GO:0004823: leucine-tRNA ligase activity0.00E+00
28GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
29GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
30GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
31GO:0046408: chlorophyll synthetase activity0.00E+00
32GO:0019843: rRNA binding1.14E-22
33GO:0003735: structural constituent of ribosome1.28E-08
34GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.36E-07
35GO:0004033: aldo-keto reductase (NADP) activity3.34E-06
36GO:0005528: FK506 binding6.25E-06
37GO:0004222: metalloendopeptidase activity3.75E-05
38GO:0002161: aminoacyl-tRNA editing activity1.03E-04
39GO:0004148: dihydrolipoyl dehydrogenase activity1.03E-04
40GO:0016168: chlorophyll binding1.55E-04
41GO:0016149: translation release factor activity, codon specific2.10E-04
42GO:0001053: plastid sigma factor activity3.49E-04
43GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.49E-04
44GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity3.49E-04
45GO:0016987: sigma factor activity3.49E-04
46GO:0050662: coenzyme binding4.03E-04
47GO:0051082: unfolded protein binding4.57E-04
48GO:0031072: heat shock protein binding5.42E-04
49GO:0008266: poly(U) RNA binding6.36E-04
50GO:0016491: oxidoreductase activity6.66E-04
51GO:0008237: metallopeptidase activity7.48E-04
52GO:0003867: 4-aminobutyrate transaminase activity8.91E-04
53GO:0005221: intracellular cyclic nucleotide activated cation channel activity8.91E-04
54GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity8.91E-04
55GO:0010012: steroid 22-alpha hydroxylase activity8.91E-04
56GO:0051996: squalene synthase activity8.91E-04
57GO:0045485: omega-6 fatty acid desaturase activity8.91E-04
58GO:0009496: plastoquinol--plastocyanin reductase activity8.91E-04
59GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity8.91E-04
60GO:0008568: microtubule-severing ATPase activity8.91E-04
61GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity8.91E-04
62GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity8.91E-04
63GO:0070006: metalloaminopeptidase activity8.91E-04
64GO:0047259: glucomannan 4-beta-mannosyltransferase activity8.91E-04
65GO:0004321: fatty-acyl-CoA synthase activity8.91E-04
66GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity8.91E-04
67GO:0005080: protein kinase C binding8.91E-04
68GO:0016041: glutamate synthase (ferredoxin) activity8.91E-04
69GO:0030941: chloroplast targeting sequence binding8.91E-04
70GO:0051920: peroxiredoxin activity9.42E-04
71GO:0003924: GTPase activity1.19E-03
72GO:0004176: ATP-dependent peptidase activity1.24E-03
73GO:0016209: antioxidant activity1.50E-03
74GO:0022891: substrate-specific transmembrane transporter activity1.56E-03
75GO:0047746: chlorophyllase activity1.94E-03
76GO:0042389: omega-3 fatty acid desaturase activity1.94E-03
77GO:0004618: phosphoglycerate kinase activity1.94E-03
78GO:0010297: heteropolysaccharide binding1.94E-03
79GO:0004326: tetrahydrofolylpolyglutamate synthase activity1.94E-03
80GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.94E-03
81GO:0016630: protochlorophyllide reductase activity1.94E-03
82GO:0008967: phosphoglycolate phosphatase activity1.94E-03
83GO:0004617: phosphoglycerate dehydrogenase activity1.94E-03
84GO:0004047: aminomethyltransferase activity1.94E-03
85GO:0004802: transketolase activity1.94E-03
86GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.94E-03
87GO:0004310: farnesyl-diphosphate farnesyltransferase activity1.94E-03
88GO:0000234: phosphoethanolamine N-methyltransferase activity1.94E-03
89GO:0050017: L-3-cyanoalanine synthase activity1.94E-03
90GO:0010291: carotene beta-ring hydroxylase activity1.94E-03
91GO:0008805: carbon-monoxide oxygenase activity1.94E-03
92GO:0003747: translation release factor activity2.20E-03
93GO:0005525: GTP binding2.43E-03
94GO:0008047: enzyme activator activity3.06E-03
95GO:0016742: hydroxymethyl-, formyl- and related transferase activity3.21E-03
96GO:0070402: NADPH binding3.21E-03
97GO:0008864: formyltetrahydrofolate deformylase activity3.21E-03
98GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor3.21E-03
99GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity3.21E-03
100GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity3.21E-03
101GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity3.21E-03
102GO:0004075: biotin carboxylase activity3.21E-03
103GO:0016531: copper chaperone activity3.21E-03
104GO:0070330: aromatase activity3.21E-03
105GO:0030267: glyoxylate reductase (NADP) activity3.21E-03
106GO:0019829: cation-transporting ATPase activity3.21E-03
107GO:0017150: tRNA dihydrouridine synthase activity3.21E-03
108GO:0016992: lipoate synthase activity3.21E-03
109GO:0003913: DNA photolyase activity3.21E-03
110GO:0004177: aminopeptidase activity3.55E-03
111GO:0044183: protein binding involved in protein folding3.55E-03
112GO:0005089: Rho guanyl-nucleotide exchange factor activity3.55E-03
113GO:0004565: beta-galactosidase activity4.64E-03
114GO:0008097: 5S rRNA binding4.68E-03
115GO:0008508: bile acid:sodium symporter activity4.68E-03
116GO:0048487: beta-tubulin binding4.68E-03
117GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity4.68E-03
118GO:0004375: glycine dehydrogenase (decarboxylating) activity4.68E-03
119GO:0004550: nucleoside diphosphate kinase activity4.68E-03
120GO:0043023: ribosomal large subunit binding4.68E-03
121GO:0003824: catalytic activity5.53E-03
122GO:0004659: prenyltransferase activity6.33E-03
123GO:0043495: protein anchor6.33E-03
124GO:0004845: uracil phosphoribosyltransferase activity6.33E-03
125GO:0004345: glucose-6-phosphate dehydrogenase activity6.33E-03
126GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity6.33E-03
127GO:0051861: glycolipid binding6.33E-03
128GO:0050378: UDP-glucuronate 4-epimerase activity6.33E-03
129GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed6.33E-03
130GO:0010328: auxin influx transmembrane transporter activity6.33E-03
131GO:0010385: double-stranded methylated DNA binding6.33E-03
132GO:0031409: pigment binding6.58E-03
133GO:0102337: 3-oxo-cerotoyl-CoA synthase activity6.58E-03
134GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity6.58E-03
135GO:0102336: 3-oxo-arachidoyl-CoA synthase activity6.58E-03
136GO:0051536: iron-sulfur cluster binding7.31E-03
137GO:0016773: phosphotransferase activity, alcohol group as acceptor8.17E-03
138GO:0003989: acetyl-CoA carboxylase activity8.17E-03
139GO:0004040: amidase activity8.17E-03
140GO:0003959: NADPH dehydrogenase activity8.17E-03
141GO:0018685: alkane 1-monooxygenase activity8.17E-03
142GO:0008374: O-acyltransferase activity8.17E-03
143GO:0009922: fatty acid elongase activity8.17E-03
144GO:0051538: 3 iron, 4 sulfur cluster binding8.17E-03
145GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.02E-02
146GO:0004130: cytochrome-c peroxidase activity1.02E-02
147GO:0042578: phosphoric ester hydrolase activity1.02E-02
148GO:0004605: phosphatidate cytidylyltransferase activity1.02E-02
149GO:0080030: methyl indole-3-acetate esterase activity1.02E-02
150GO:0016208: AMP binding1.02E-02
151GO:1990714: hydroxyproline O-galactosyltransferase activity1.02E-02
152GO:0004332: fructose-bisphosphate aldolase activity1.02E-02
153GO:0016688: L-ascorbate peroxidase activity1.02E-02
154GO:0004747: ribokinase activity1.23E-02
155GO:0005242: inward rectifier potassium channel activity1.23E-02
156GO:0005261: cation channel activity1.23E-02
157GO:0051753: mannan synthase activity1.23E-02
158GO:0004849: uridine kinase activity1.23E-02
159GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.23E-02
160GO:0004124: cysteine synthase activity1.23E-02
161GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.23E-02
162GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.23E-02
163GO:0004812: aminoacyl-tRNA ligase activity1.26E-02
164GO:0051537: 2 iron, 2 sulfur cluster binding1.46E-02
165GO:0019899: enzyme binding1.46E-02
166GO:0008235: metalloexopeptidase activity1.46E-02
167GO:0004620: phospholipase activity1.46E-02
168GO:0009881: photoreceptor activity1.46E-02
169GO:0004791: thioredoxin-disulfide reductase activity1.59E-02
170GO:0008865: fructokinase activity1.71E-02
171GO:0052747: sinapyl alcohol dehydrogenase activity1.71E-02
172GO:0043022: ribosome binding1.71E-02
173GO:0008312: 7S RNA binding1.71E-02
174GO:0003723: RNA binding1.73E-02
175GO:0048038: quinone binding1.83E-02
176GO:0005375: copper ion transmembrane transporter activity1.96E-02
177GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.96E-02
178GO:0003843: 1,3-beta-D-glucan synthase activity1.96E-02
179GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.96E-02
180GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.09E-02
181GO:0016207: 4-coumarate-CoA ligase activity2.23E-02
182GO:0005200: structural constituent of cytoskeleton2.36E-02
183GO:0046872: metal ion binding2.43E-02
184GO:0005384: manganese ion transmembrane transporter activity2.52E-02
185GO:0005381: iron ion transmembrane transporter activity2.52E-02
186GO:0047617: acyl-CoA hydrolase activity2.52E-02
187GO:0003729: mRNA binding2.73E-02
188GO:0016874: ligase activity2.80E-02
189GO:0030234: enzyme regulator activity2.81E-02
190GO:0015386: potassium:proton antiporter activity3.12E-02
191GO:0047372: acylglycerol lipase activity3.12E-02
192GO:0016746: transferase activity, transferring acyl groups3.13E-02
193GO:0008236: serine-type peptidase activity3.30E-02
194GO:0000049: tRNA binding3.44E-02
195GO:0004601: peroxidase activity3.44E-02
196GO:0045551: cinnamyl-alcohol dehydrogenase activity3.44E-02
197GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.47E-02
198GO:0016788: hydrolase activity, acting on ester bonds3.54E-02
199GO:0015238: drug transmembrane transporter activity3.64E-02
200GO:0005515: protein binding3.75E-02
201GO:0004089: carbonate dehydratase activity3.76E-02
202GO:0015095: magnesium ion transmembrane transporter activity3.76E-02
203GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism3.76E-02
204GO:0005262: calcium channel activity3.76E-02
205GO:0004022: alcohol dehydrogenase (NAD) activity3.76E-02
206GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.00E-02
207GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.10E-02
208GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.13E-02
209GO:0050660: flavin adenine dinucleotide binding4.25E-02
210GO:0030552: cAMP binding4.45E-02
211GO:0030553: cGMP binding4.45E-02
212GO:0050661: NADP binding4.99E-02
RankGO TermAdjusted P value
1GO:0009571: proplastid stroma0.00E+00
2GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
3GO:0009507: chloroplast8.22E-124
4GO:0009941: chloroplast envelope1.54E-65
5GO:0009570: chloroplast stroma1.57E-58
6GO:0009535: chloroplast thylakoid membrane3.12E-56
7GO:0009579: thylakoid4.00E-28
8GO:0009534: chloroplast thylakoid1.75E-24
9GO:0009543: chloroplast thylakoid lumen2.26E-18
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.25E-13
11GO:0005840: ribosome4.09E-12
12GO:0031969: chloroplast membrane4.19E-12
13GO:0031977: thylakoid lumen5.43E-12
14GO:0048046: apoplast1.47E-07
15GO:0009654: photosystem II oxygen evolving complex3.18E-07
16GO:0009536: plastid8.65E-07
17GO:0042651: thylakoid membrane8.17E-06
18GO:0010319: stromule9.55E-06
19GO:0009706: chloroplast inner membrane1.19E-05
20GO:0010287: plastoglobule2.17E-05
21GO:0000311: plastid large ribosomal subunit3.31E-05
22GO:0009523: photosystem II5.18E-05
23GO:0019898: extrinsic component of membrane5.18E-05
24GO:0030095: chloroplast photosystem II5.55E-05
25GO:0016020: membrane9.26E-05
26GO:0016021: integral component of membrane1.84E-04
27GO:0015934: large ribosomal subunit3.16E-04
28GO:0009547: plastid ribosome8.91E-04
29GO:0009515: granal stacked thylakoid8.91E-04
30GO:0009782: photosystem I antenna complex8.91E-04
31GO:0009344: nitrite reductase complex [NAD(P)H]8.91E-04
32GO:0009533: chloroplast stromal thylakoid1.20E-03
33GO:0009532: plastid stroma1.24E-03
34GO:0022626: cytosolic ribosome1.52E-03
35GO:0080085: signal recognition particle, chloroplast targeting1.94E-03
36GO:0000427: plastid-encoded plastid RNA polymerase complex1.94E-03
37GO:0042170: plastid membrane1.94E-03
38GO:0009528: plastid inner membrane3.21E-03
39GO:0005759: mitochondrial matrix4.31E-03
40GO:0015630: microtubule cytoskeleton4.68E-03
41GO:0005960: glycine cleavage complex4.68E-03
42GO:0030076: light-harvesting complex5.89E-03
43GO:0009517: PSII associated light-harvesting complex II6.33E-03
44GO:0009527: plastid outer membrane6.33E-03
45GO:0009526: plastid envelope6.33E-03
46GO:0055035: plastid thylakoid membrane8.17E-03
47GO:0009512: cytochrome b6f complex8.17E-03
48GO:0031209: SCAR complex1.02E-02
49GO:0031359: integral component of chloroplast outer membrane1.46E-02
50GO:0000148: 1,3-beta-D-glucan synthase complex1.96E-02
51GO:0009539: photosystem II reaction center1.96E-02
52GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.96E-02
53GO:0005763: mitochondrial small ribosomal subunit2.23E-02
54GO:0045298: tubulin complex2.23E-02
55GO:0030529: intracellular ribonucleoprotein complex2.65E-02
56GO:0046658: anchored component of plasma membrane2.74E-02
57GO:0016324: apical plasma membrane2.81E-02
58GO:0032040: small-subunit processome3.44E-02
59GO:0009707: chloroplast outer membrane3.47E-02
60GO:0009508: plastid chromosome3.76E-02
61GO:0009574: preprophase band3.76E-02
62GO:0030659: cytoplasmic vesicle membrane4.10E-02
63GO:0000312: plastid small ribosomal subunit4.10E-02
64GO:0005874: microtubule4.47E-02
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Gene type



Gene DE type