Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G39920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090279: regulation of calcium ion import0.00E+00
2GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
3GO:0071474: cellular hyperosmotic response0.00E+00
4GO:0070584: mitochondrion morphogenesis0.00E+00
5GO:0015812: gamma-aminobutyric acid transport1.77E-05
6GO:0032958: inositol phosphate biosynthetic process1.77E-05
7GO:0080065: 4-alpha-methyl-delta7-sterol oxidation1.77E-05
8GO:0051262: protein tetramerization4.61E-05
9GO:0006598: polyamine catabolic process8.18E-05
10GO:0006020: inositol metabolic process1.23E-04
11GO:2000306: positive regulation of photomorphogenesis1.69E-04
12GO:0010600: regulation of auxin biosynthetic process1.69E-04
13GO:0045962: positive regulation of development, heterochronic2.72E-04
14GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.27E-04
15GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.27E-04
16GO:0010161: red light signaling pathway3.84E-04
17GO:1900056: negative regulation of leaf senescence3.84E-04
18GO:0009704: de-etiolation4.43E-04
19GO:0010928: regulation of auxin mediated signaling pathway4.43E-04
20GO:0009827: plant-type cell wall modification5.05E-04
21GO:0007186: G-protein coupled receptor signaling pathway5.05E-04
22GO:0030042: actin filament depolymerization6.32E-04
23GO:0048354: mucilage biosynthetic process involved in seed coat development6.32E-04
24GO:0010380: regulation of chlorophyll biosynthetic process6.32E-04
25GO:0006874: cellular calcium ion homeostasis1.29E-03
26GO:0003333: amino acid transmembrane transport1.37E-03
27GO:0010017: red or far-red light signaling pathway1.46E-03
28GO:0009409: response to cold1.68E-03
29GO:0006814: sodium ion transport2.00E-03
30GO:0000302: response to reactive oxygen species2.19E-03
31GO:0016126: sterol biosynthetic process2.80E-03
32GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.91E-03
33GO:0009817: defense response to fungus, incompatible interaction3.36E-03
34GO:0006811: ion transport3.59E-03
35GO:0007568: aging3.70E-03
36GO:0009910: negative regulation of flower development3.70E-03
37GO:0009631: cold acclimation3.70E-03
38GO:0016051: carbohydrate biosynthetic process3.94E-03
39GO:0009637: response to blue light3.94E-03
40GO:0009416: response to light stimulus4.11E-03
41GO:0042542: response to hydrogen peroxide4.56E-03
42GO:0051707: response to other organism4.68E-03
43GO:0045893: positive regulation of transcription, DNA-templated4.71E-03
44GO:0008643: carbohydrate transport4.94E-03
45GO:0009965: leaf morphogenesis5.07E-03
46GO:0009585: red, far-red light phototransduction5.75E-03
47GO:0043086: negative regulation of catalytic activity6.45E-03
48GO:0006351: transcription, DNA-templated6.93E-03
49GO:0009624: response to nematode7.34E-03
50GO:0009414: response to water deprivation8.10E-03
51GO:0009845: seed germination9.06E-03
52GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.16E-02
53GO:0010468: regulation of gene expression1.22E-02
54GO:0009658: chloroplast organization1.46E-02
55GO:0006970: response to osmotic stress1.54E-02
56GO:0006355: regulation of transcription, DNA-templated1.54E-02
57GO:0007049: cell cycle1.58E-02
58GO:0048366: leaf development1.64E-02
59GO:0080167: response to karrikin1.70E-02
60GO:0007165: signal transduction1.74E-02
61GO:0010200: response to chitin1.75E-02
62GO:0009408: response to heat2.25E-02
63GO:0009753: response to jasmonic acid2.36E-02
64GO:0009908: flower development3.15E-02
65GO:0009735: response to cytokinin3.18E-02
66GO:0009738: abscisic acid-activated signaling pathway3.31E-02
67GO:0009611: response to wounding3.44E-02
68GO:0035556: intracellular signal transduction3.52E-02
69GO:0051301: cell division3.60E-02
70GO:0055085: transmembrane transport4.01E-02
71GO:0006952: defense response4.61E-02
RankGO TermAdjusted P value
1GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
2GO:0015185: gamma-aminobutyric acid transmembrane transporter activity1.77E-05
3GO:0033857: diphosphoinositol-pentakisphosphate kinase activity1.77E-05
4GO:0000829: inositol heptakisphosphate kinase activity1.77E-05
5GO:0005227: calcium activated cation channel activity1.77E-05
6GO:0000828: inositol hexakisphosphate kinase activity1.77E-05
7GO:0015180: L-alanine transmembrane transporter activity4.61E-05
8GO:0047216: inositol 3-alpha-galactosyltransferase activity4.61E-05
9GO:0046592: polyamine oxidase activity8.18E-05
10GO:0015189: L-lysine transmembrane transporter activity1.23E-04
11GO:0000254: C-4 methylsterol oxidase activity1.23E-04
12GO:0015181: arginine transmembrane transporter activity1.23E-04
13GO:0005313: L-glutamate transmembrane transporter activity1.69E-04
14GO:0004930: G-protein coupled receptor activity1.69E-04
15GO:0005261: cation channel activity3.27E-04
16GO:0005315: inorganic phosphate transmembrane transporter activity9.08E-04
17GO:0004565: beta-galactosidase activity9.08E-04
18GO:0008131: primary amine oxidase activity9.82E-04
19GO:0004970: ionotropic glutamate receptor activity1.06E-03
20GO:0005217: intracellular ligand-gated ion channel activity1.06E-03
21GO:0005216: ion channel activity1.29E-03
22GO:0004707: MAP kinase activity1.37E-03
23GO:0008514: organic anion transmembrane transporter activity1.63E-03
24GO:0015293: symporter activity5.07E-03
25GO:0015171: amino acid transmembrane transporter activity6.17E-03
26GO:0003700: transcription factor activity, sequence-specific DNA binding6.59E-03
27GO:0003779: actin binding7.19E-03
28GO:0016758: transferase activity, transferring hexosyl groups8.42E-03
29GO:0003677: DNA binding8.93E-03
30GO:0015144: carbohydrate transmembrane transporter activity9.73E-03
31GO:0046910: pectinesterase inhibitor activity1.02E-02
32GO:0015297: antiporter activity1.04E-02
33GO:0005351: sugar:proton symporter activity1.06E-02
34GO:0061630: ubiquitin protein ligase activity1.77E-02
35GO:0005515: protein binding2.62E-02
36GO:0008289: lipid binding2.85E-02
37GO:0005516: calmodulin binding4.53E-02
RankGO TermAdjusted P value
1GO:0015629: actin cytoskeleton1.54E-03
2GO:0005777: peroxisome4.71E-03
3GO:0031966: mitochondrial membrane5.48E-03
4GO:0016021: integral component of membrane7.26E-03
5GO:0005886: plasma membrane1.05E-02
6GO:0005887: integral component of plasma membrane2.80E-02
7GO:0009579: thylakoid3.85E-02
8GO:0009941: chloroplast envelope3.92E-02
9GO:0031225: anchored component of membrane4.65E-02
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Gene type



Gene DE type