GO Enrichment Analysis of Co-expressed Genes with
AT2G38120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0042493: response to drug | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0042254: ribosome biogenesis | 1.62E-07 |
| 5 | GO:0006412: translation | 1.32E-06 |
| 6 | GO:0046620: regulation of organ growth | 2.41E-05 |
| 7 | GO:0043489: RNA stabilization | 5.79E-05 |
| 8 | GO:0009926: auxin polar transport | 8.09E-05 |
| 9 | GO:0010207: photosystem II assembly | 1.06E-04 |
| 10 | GO:0010143: cutin biosynthetic process | 1.06E-04 |
| 11 | GO:0006833: water transport | 1.35E-04 |
| 12 | GO:0010541: acropetal auxin transport | 1.41E-04 |
| 13 | GO:0010024: phytochromobilin biosynthetic process | 1.41E-04 |
| 14 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.26E-04 |
| 15 | GO:0080055: low-affinity nitrate transport | 2.40E-04 |
| 16 | GO:0006788: heme oxidation | 2.40E-04 |
| 17 | GO:0010160: formation of animal organ boundary | 2.40E-04 |
| 18 | GO:0015840: urea transport | 2.40E-04 |
| 19 | GO:0034220: ion transmembrane transport | 2.90E-04 |
| 20 | GO:0009650: UV protection | 3.49E-04 |
| 21 | GO:0051513: regulation of monopolar cell growth | 3.49E-04 |
| 22 | GO:0080170: hydrogen peroxide transmembrane transport | 3.49E-04 |
| 23 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 3.49E-04 |
| 24 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 3.49E-04 |
| 25 | GO:0045490: pectin catabolic process | 4.24E-04 |
| 26 | GO:0030104: water homeostasis | 4.66E-04 |
| 27 | GO:0009828: plant-type cell wall loosening | 4.67E-04 |
| 28 | GO:0060918: auxin transport | 7.24E-04 |
| 29 | GO:0006751: glutathione catabolic process | 7.24E-04 |
| 30 | GO:0042549: photosystem II stabilization | 7.24E-04 |
| 31 | GO:1900056: negative regulation of leaf senescence | 1.01E-03 |
| 32 | GO:0009664: plant-type cell wall organization | 1.42E-03 |
| 33 | GO:0010206: photosystem II repair | 1.48E-03 |
| 34 | GO:0006949: syncytium formation | 1.83E-03 |
| 35 | GO:0009733: response to auxin | 1.83E-03 |
| 36 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.02E-03 |
| 37 | GO:0010015: root morphogenesis | 2.02E-03 |
| 38 | GO:0008361: regulation of cell size | 2.21E-03 |
| 39 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.21E-03 |
| 40 | GO:0009734: auxin-activated signaling pathway | 2.38E-03 |
| 41 | GO:0010540: basipetal auxin transport | 2.62E-03 |
| 42 | GO:0000027: ribosomal large subunit assembly | 3.26E-03 |
| 43 | GO:0040008: regulation of growth | 3.51E-03 |
| 44 | GO:0048511: rhythmic process | 3.72E-03 |
| 45 | GO:0009411: response to UV | 4.20E-03 |
| 46 | GO:0055085: transmembrane transport | 4.32E-03 |
| 47 | GO:0048443: stamen development | 4.44E-03 |
| 48 | GO:0006284: base-excision repair | 4.44E-03 |
| 49 | GO:0000413: protein peptidyl-prolyl isomerization | 4.95E-03 |
| 50 | GO:0009958: positive gravitropism | 5.21E-03 |
| 51 | GO:0009826: unidimensional cell growth | 5.45E-03 |
| 52 | GO:0042752: regulation of circadian rhythm | 5.48E-03 |
| 53 | GO:0009658: chloroplast organization | 5.66E-03 |
| 54 | GO:0009630: gravitropism | 6.31E-03 |
| 55 | GO:0030163: protein catabolic process | 6.59E-03 |
| 56 | GO:0009639: response to red or far red light | 6.88E-03 |
| 57 | GO:0080167: response to karrikin | 7.02E-03 |
| 58 | GO:0010027: thylakoid membrane organization | 7.78E-03 |
| 59 | GO:0015979: photosynthesis | 8.01E-03 |
| 60 | GO:0015995: chlorophyll biosynthetic process | 8.71E-03 |
| 61 | GO:0010218: response to far red light | 1.00E-02 |
| 62 | GO:0016042: lipid catabolic process | 1.01E-02 |
| 63 | GO:0048527: lateral root development | 1.04E-02 |
| 64 | GO:0006281: DNA repair | 1.04E-02 |
| 65 | GO:0009631: cold acclimation | 1.04E-02 |
| 66 | GO:0045087: innate immune response | 1.11E-02 |
| 67 | GO:0009637: response to blue light | 1.11E-02 |
| 68 | GO:0030001: metal ion transport | 1.21E-02 |
| 69 | GO:0006810: transport | 1.27E-02 |
| 70 | GO:0009640: photomorphogenesis | 1.32E-02 |
| 71 | GO:0009735: response to cytokinin | 1.69E-02 |
| 72 | GO:0006857: oligopeptide transport | 1.71E-02 |
| 73 | GO:0007165: signal transduction | 1.98E-02 |
| 74 | GO:0042545: cell wall modification | 2.05E-02 |
| 75 | GO:0006396: RNA processing | 2.14E-02 |
| 76 | GO:0009742: brassinosteroid mediated signaling pathway | 2.19E-02 |
| 77 | GO:0009790: embryo development | 2.75E-02 |
| 78 | GO:0009451: RNA modification | 3.15E-02 |
| 79 | GO:0006470: protein dephosphorylation | 3.40E-02 |
| 80 | GO:0010468: regulation of gene expression | 3.51E-02 |
| 81 | GO:0009414: response to water deprivation | 3.65E-02 |
| 82 | GO:0071555: cell wall organization | 3.73E-02 |
| 83 | GO:0042742: defense response to bacterium | 3.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0019843: rRNA binding | 2.72E-10 |
| 3 | GO:0003735: structural constituent of ribosome | 1.56E-08 |
| 4 | GO:0005528: FK506 binding | 2.76E-06 |
| 5 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.73E-06 |
| 6 | GO:0015250: water channel activity | 2.48E-05 |
| 7 | GO:0015200: methylammonium transmembrane transporter activity | 5.79E-05 |
| 8 | GO:0008266: poly(U) RNA binding | 1.06E-04 |
| 9 | GO:0003839: gamma-glutamylcyclotransferase activity | 1.41E-04 |
| 10 | GO:0030570: pectate lyase activity | 2.26E-04 |
| 11 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 2.40E-04 |
| 12 | GO:0050734: hydroxycinnamoyltransferase activity | 2.40E-04 |
| 13 | GO:0016829: lyase activity | 3.09E-04 |
| 14 | GO:0004392: heme oxygenase (decyclizing) activity | 4.66E-04 |
| 15 | GO:0015204: urea transmembrane transporter activity | 4.66E-04 |
| 16 | GO:0016791: phosphatase activity | 4.67E-04 |
| 17 | GO:0008725: DNA-3-methyladenine glycosylase activity | 5.92E-04 |
| 18 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 7.24E-04 |
| 19 | GO:0008519: ammonium transmembrane transporter activity | 7.24E-04 |
| 20 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 7.24E-04 |
| 21 | GO:0004650: polygalacturonase activity | 1.96E-03 |
| 22 | GO:0010329: auxin efflux transmembrane transporter activity | 2.41E-03 |
| 23 | GO:0004707: MAP kinase activity | 3.72E-03 |
| 24 | GO:0016788: hydrolase activity, acting on ester bonds | 5.77E-03 |
| 25 | GO:0052689: carboxylic ester hydrolase activity | 7.75E-03 |
| 26 | GO:0008236: serine-type peptidase activity | 9.03E-03 |
| 27 | GO:0004722: protein serine/threonine phosphatase activity | 9.22E-03 |
| 28 | GO:0003993: acid phosphatase activity | 1.14E-02 |
| 29 | GO:0045330: aspartyl esterase activity | 1.75E-02 |
| 30 | GO:0030599: pectinesterase activity | 2.01E-02 |
| 31 | GO:0016746: transferase activity, transferring acyl groups | 2.14E-02 |
| 32 | GO:0004252: serine-type endopeptidase activity | 2.65E-02 |
| 33 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.94E-02 |
| 34 | GO:0046910: pectinesterase inhibitor activity | 2.94E-02 |
| 35 | GO:0003723: RNA binding | 3.38E-02 |
| 36 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.67E-02 |
| 37 | GO:0005215: transporter activity | 4.12E-02 |
| 38 | GO:0046983: protein dimerization activity | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 1.89E-11 |
| 3 | GO:0009579: thylakoid | 1.15E-09 |
| 4 | GO:0009507: chloroplast | 3.15E-09 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 2.73E-08 |
| 6 | GO:0009941: chloroplast envelope | 7.70E-08 |
| 7 | GO:0005840: ribosome | 2.59E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 5.70E-07 |
| 9 | GO:0031977: thylakoid lumen | 2.22E-06 |
| 10 | GO:0042807: central vacuole | 1.82E-05 |
| 11 | GO:0016020: membrane | 5.05E-05 |
| 12 | GO:0009547: plastid ribosome | 5.79E-05 |
| 13 | GO:0043674: columella | 5.79E-05 |
| 14 | GO:0009505: plant-type cell wall | 6.66E-05 |
| 15 | GO:0009534: chloroplast thylakoid | 1.02E-04 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.01E-03 |
| 17 | GO:0005576: extracellular region | 1.06E-03 |
| 18 | GO:0000326: protein storage vacuole | 1.32E-03 |
| 19 | GO:0008180: COP9 signalosome | 1.48E-03 |
| 20 | GO:0000311: plastid large ribosomal subunit | 2.21E-03 |
| 21 | GO:0005887: integral component of plasma membrane | 2.27E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 2.62E-03 |
| 23 | GO:0022626: cytosolic ribosome | 3.02E-03 |
| 24 | GO:0005618: cell wall | 3.26E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 3.49E-03 |
| 26 | GO:0009705: plant-type vacuole membrane | 3.68E-03 |
| 27 | GO:0015935: small ribosomal subunit | 3.72E-03 |
| 28 | GO:0019898: extrinsic component of membrane | 5.75E-03 |
| 29 | GO:0022625: cytosolic large ribosomal subunit | 7.38E-03 |
| 30 | GO:0030529: intracellular ribonucleoprotein complex | 7.78E-03 |
| 31 | GO:0019005: SCF ubiquitin ligase complex | 9.36E-03 |
| 32 | GO:0000502: proteasome complex | 1.63E-02 |
| 33 | GO:0005886: plasma membrane | 2.05E-02 |
| 34 | GO:0031225: anchored component of membrane | 2.88E-02 |
| 35 | GO:0005774: vacuolar membrane | 3.73E-02 |
| 36 | GO:0031969: chloroplast membrane | 4.92E-02 |