Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G37640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0070455: positive regulation of heme biosynthetic process0.00E+00
4GO:0042493: response to drug0.00E+00
5GO:1905499: trichome papilla formation0.00E+00
6GO:0015995: chlorophyll biosynthetic process2.25E-06
7GO:0009772: photosynthetic electron transport in photosystem II3.42E-05
8GO:0015979: photosynthesis3.50E-05
9GO:0042759: long-chain fatty acid biosynthetic process8.61E-05
10GO:0042371: vitamin K biosynthetic process8.61E-05
11GO:0016024: CDP-diacylglycerol biosynthetic process1.42E-04
12GO:0009735: response to cytokinin1.72E-04
13GO:0010541: acropetal auxin transport2.04E-04
14GO:0010025: wax biosynthetic process2.36E-04
15GO:0010160: formation of animal organ boundary3.42E-04
16GO:0015840: urea transport3.42E-04
17GO:0090391: granum assembly3.42E-04
18GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.83E-04
19GO:0048443: stamen development4.16E-04
20GO:0043481: anthocyanin accumulation in tissues in response to UV light4.92E-04
21GO:0009650: UV protection4.92E-04
22GO:0033014: tetrapyrrole biosynthetic process4.92E-04
23GO:0006986: response to unfolded protein4.92E-04
24GO:0071484: cellular response to light intensity4.92E-04
25GO:0009102: biotin biosynthetic process4.92E-04
26GO:0051085: chaperone mediated protein folding requiring cofactor4.92E-04
27GO:0051639: actin filament network formation4.92E-04
28GO:0009958: positive gravitropism5.23E-04
29GO:0022622: root system development6.55E-04
30GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway6.55E-04
31GO:0051764: actin crosslink formation6.55E-04
32GO:0009828: plant-type cell wall loosening7.72E-04
33GO:0045490: pectin catabolic process8.20E-04
34GO:0010236: plastoquinone biosynthetic process8.29E-04
35GO:0006665: sphingolipid metabolic process8.29E-04
36GO:0010027: thylakoid membrane organization9.13E-04
37GO:0006655: phosphatidylglycerol biosynthetic process1.01E-03
38GO:0060918: auxin transport1.01E-03
39GO:0042372: phylloquinone biosynthetic process1.20E-03
40GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.20E-03
41GO:0009826: unidimensional cell growth1.34E-03
42GO:0048527: lateral root development1.35E-03
43GO:0010196: nonphotochemical quenching1.41E-03
44GO:0032880: regulation of protein localization1.41E-03
45GO:0042254: ribosome biogenesis1.44E-03
46GO:0008610: lipid biosynthetic process1.63E-03
47GO:0048564: photosystem I assembly1.63E-03
48GO:0010206: photosystem II repair2.10E-03
49GO:0006783: heme biosynthetic process2.10E-03
50GO:0048589: developmental growth2.10E-03
51GO:0006779: porphyrin-containing compound biosynthetic process2.35E-03
52GO:0042761: very long-chain fatty acid biosynthetic process2.35E-03
53GO:0009664: plant-type cell wall organization2.37E-03
54GO:0006782: protoporphyrinogen IX biosynthetic process2.61E-03
55GO:0006535: cysteine biosynthetic process from serine2.61E-03
56GO:0009773: photosynthetic electron transport in photosystem I2.87E-03
57GO:0018119: peptidyl-cysteine S-nitrosylation2.87E-03
58GO:0010152: pollen maturation3.15E-03
59GO:0008361: regulation of cell size3.15E-03
60GO:2000012: regulation of auxin polar transport3.43E-03
61GO:0009767: photosynthetic electron transport chain3.43E-03
62GO:0010143: cutin biosynthetic process3.73E-03
63GO:0010207: photosystem II assembly3.73E-03
64GO:0010540: basipetal auxin transport3.73E-03
65GO:0006412: translation4.09E-03
66GO:0006833: water transport4.34E-03
67GO:0000027: ribosomal large subunit assembly4.65E-03
68GO:0051017: actin filament bundle assembly4.65E-03
69GO:0019344: cysteine biosynthetic process4.65E-03
70GO:0007017: microtubule-based process4.98E-03
71GO:0030245: cellulose catabolic process5.66E-03
72GO:0009411: response to UV6.01E-03
73GO:0006284: base-excision repair6.36E-03
74GO:0010091: trichome branching6.36E-03
75GO:0009789: positive regulation of abscisic acid-activated signaling pathway6.73E-03
76GO:0008284: positive regulation of cell proliferation6.73E-03
77GO:0042335: cuticle development7.10E-03
78GO:0080022: primary root development7.10E-03
79GO:0015986: ATP synthesis coupled proton transport7.87E-03
80GO:0009791: post-embryonic development8.26E-03
81GO:0009639: response to red or far red light9.91E-03
82GO:0009567: double fertilization forming a zygote and endosperm9.91E-03
83GO:0016126: sterol biosynthetic process1.12E-02
84GO:0009627: systemic acquired resistance1.21E-02
85GO:0016311: dephosphorylation1.31E-02
86GO:0010218: response to far red light1.45E-02
87GO:0006869: lipid transport1.56E-02
88GO:0009637: response to blue light1.60E-02
89GO:0016042: lipid catabolic process1.71E-02
90GO:0009733: response to auxin1.76E-02
91GO:0006281: DNA repair1.76E-02
92GO:0030001: metal ion transport1.76E-02
93GO:0009640: photomorphogenesis1.92E-02
94GO:0009926: auxin polar transport1.92E-02
95GO:0042538: hyperosmotic salinity response2.25E-02
96GO:0006486: protein glycosylation2.37E-02
97GO:0051603: proteolysis involved in cellular protein catabolic process2.43E-02
98GO:0042545: cell wall modification2.98E-02
99GO:0007165: signal transduction3.81E-02
100GO:0009737: response to abscisic acid3.92E-02
101GO:0055085: transmembrane transport3.95E-02
102GO:0009790: embryo development3.99E-02
RankGO TermAdjusted P value
1GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
2GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
3GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
4GO:0004076: biotin synthase activity0.00E+00
5GO:0016851: magnesium chelatase activity3.65E-06
6GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.77E-05
7GO:0015200: methylammonium transmembrane transporter activity8.61E-05
8GO:0004163: diphosphomevalonate decarboxylase activity8.61E-05
9GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity8.61E-05
10GO:0030570: pectate lyase activity3.83E-04
11GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity4.92E-04
12GO:0001872: (1->3)-beta-D-glucan binding4.92E-04
13GO:0019843: rRNA binding5.49E-04
14GO:0003735: structural constituent of ribosome6.13E-04
15GO:0043495: protein anchor6.55E-04
16GO:0015204: urea transmembrane transporter activity6.55E-04
17GO:0004659: prenyltransferase activity6.55E-04
18GO:0010011: auxin binding6.55E-04
19GO:0009922: fatty acid elongase activity8.29E-04
20GO:0008725: DNA-3-methyladenine glycosylase activity8.29E-04
21GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.01E-03
22GO:0008519: ammonium transmembrane transporter activity1.01E-03
23GO:0004124: cysteine synthase activity1.20E-03
24GO:0004714: transmembrane receptor protein tyrosine kinase activity1.63E-03
25GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors2.10E-03
26GO:0008378: galactosyltransferase activity3.15E-03
27GO:0004565: beta-galactosidase activity3.43E-03
28GO:0010329: auxin efflux transmembrane transporter activity3.43E-03
29GO:0008083: growth factor activity3.73E-03
30GO:0005528: FK506 binding4.65E-03
31GO:0016829: lyase activity4.85E-03
32GO:0004252: serine-type endopeptidase activity4.98E-03
33GO:0030170: pyridoxal phosphate binding4.98E-03
34GO:0051087: chaperone binding4.98E-03
35GO:0004707: MAP kinase activity5.32E-03
36GO:0008810: cellulase activity6.01E-03
37GO:0046933: proton-transporting ATP synthase activity, rotational mechanism7.48E-03
38GO:0010181: FMN binding7.87E-03
39GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds8.84E-03
40GO:0051015: actin filament binding9.48E-03
41GO:0016788: hydrolase activity, acting on ester bonds9.75E-03
42GO:0016791: phosphatase activity9.91E-03
43GO:0008483: transaminase activity1.03E-02
44GO:0005200: structural constituent of cytoskeleton1.03E-02
45GO:0015250: water channel activity1.12E-02
46GO:0030247: polysaccharide binding1.26E-02
47GO:0008236: serine-type peptidase activity1.31E-02
48GO:0052689: carboxylic ester hydrolase activity1.31E-02
49GO:0003993: acid phosphatase activity1.65E-02
50GO:0051539: 4 iron, 4 sulfur cluster binding1.76E-02
51GO:0003924: GTPase activity1.76E-02
52GO:0004185: serine-type carboxypeptidase activity1.92E-02
53GO:0051537: 2 iron, 2 sulfur cluster binding2.02E-02
54GO:0005198: structural molecule activity2.08E-02
55GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.14E-02
56GO:0003690: double-stranded DNA binding2.43E-02
57GO:0008289: lipid binding2.45E-02
58GO:0045330: aspartyl esterase activity2.55E-02
59GO:0016887: ATPase activity2.73E-02
60GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.73E-02
61GO:0004650: polygalacturonase activity2.85E-02
62GO:0030599: pectinesterase activity2.92E-02
63GO:0051082: unfolded protein binding3.04E-02
64GO:0016746: transferase activity, transferring acyl groups3.11E-02
65GO:0000166: nucleotide binding3.12E-02
66GO:0016758: transferase activity, transferring hexosyl groups3.50E-02
67GO:0016740: transferase activity3.80E-02
68GO:0046910: pectinesterase inhibitor activity4.27E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
3GO:0009570: chloroplast stroma6.96E-12
4GO:0030095: chloroplast photosystem II3.62E-08
5GO:0009941: chloroplast envelope1.32E-07
6GO:0009579: thylakoid2.29E-07
7GO:0009534: chloroplast thylakoid2.38E-07
8GO:0009535: chloroplast thylakoid membrane3.55E-07
9GO:0009507: chloroplast6.60E-07
10GO:0010007: magnesium chelatase complex1.53E-06
11GO:0009543: chloroplast thylakoid lumen2.30E-06
12GO:0005576: extracellular region1.66E-05
13GO:0009515: granal stacked thylakoid8.61E-05
14GO:0009923: fatty acid elongase complex8.61E-05
15GO:0031977: thylakoid lumen1.53E-04
16GO:0005618: cell wall1.64E-04
17GO:0009654: photosystem II oxygen evolving complex2.91E-04
18GO:0009509: chromoplast3.42E-04
19GO:0032432: actin filament bundle4.92E-04
20GO:0019898: extrinsic component of membrane6.01E-04
21GO:0005840: ribosome8.13E-04
22GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)1.01E-03
23GO:0009505: plant-type cell wall1.11E-03
24GO:0042807: central vacuole1.41E-03
25GO:0000326: protein storage vacuole1.86E-03
26GO:0005884: actin filament2.87E-03
27GO:0005768: endosome2.93E-03
28GO:0000312: plastid small ribosomal subunit3.73E-03
29GO:0043234: protein complex4.34E-03
30GO:0048046: apoplast7.12E-03
31GO:0016020: membrane7.25E-03
32GO:0046658: anchored component of plasma membrane8.18E-03
33GO:0009523: photosystem II8.26E-03
34GO:0010319: stromule1.03E-02
35GO:0031225: anchored component of membrane1.09E-02
36GO:0005802: trans-Golgi network1.13E-02
37GO:0005773: vacuole1.37E-02
38GO:0000139: Golgi membrane2.23E-02
39GO:0010008: endosome membrane2.73E-02
40GO:0009706: chloroplast inner membrane3.04E-02
41GO:0010287: plastoglobule3.44E-02
42GO:0005759: mitochondrial matrix4.20E-02
43GO:0009705: plant-type vacuole membrane4.49E-02
44GO:0005615: extracellular space4.86E-02
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Gene type



Gene DE type