Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G37620

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
2GO:0045761: regulation of adenylate cyclase activity0.00E+00
3GO:0070125: mitochondrial translational elongation0.00E+00
4GO:0080094: response to trehalose-6-phosphate0.00E+00
5GO:0010394: homogalacturonan metabolic process0.00E+00
6GO:0006633: fatty acid biosynthetic process8.72E-09
7GO:0042026: protein refolding1.99E-07
8GO:0045489: pectin biosynthetic process6.24E-07
9GO:0007005: mitochondrion organization1.53E-05
10GO:0006458: 'de novo' protein folding3.14E-05
11GO:0010583: response to cyclopentenone4.66E-05
12GO:0045488: pectin metabolic process9.88E-05
13GO:0019510: S-adenosylhomocysteine catabolic process9.88E-05
14GO:0006169: adenosine salvage9.88E-05
15GO:0010480: microsporocyte differentiation9.88E-05
16GO:0042547: cell wall modification involved in multidimensional cell growth9.88E-05
17GO:0080183: response to photooxidative stress2.32E-04
18GO:0071258: cellular response to gravity2.32E-04
19GO:0008154: actin polymerization or depolymerization2.32E-04
20GO:0043039: tRNA aminoacylation2.32E-04
21GO:0006695: cholesterol biosynthetic process2.32E-04
22GO:1903338: regulation of cell wall organization or biogenesis2.32E-04
23GO:0033353: S-adenosylmethionine cycle2.32E-04
24GO:0007163: establishment or maintenance of cell polarity2.32E-04
25GO:0007017: microtubule-based process3.49E-04
26GO:0061077: chaperone-mediated protein folding3.84E-04
27GO:0006065: UDP-glucuronate biosynthetic process3.86E-04
28GO:0006696: ergosterol biosynthetic process3.86E-04
29GO:0045793: positive regulation of cell size3.86E-04
30GO:0006096: glycolytic process4.11E-04
31GO:0006730: one-carbon metabolic process4.20E-04
32GO:0040007: growth4.58E-04
33GO:0016117: carotenoid biosynthetic process5.38E-04
34GO:0046686: response to cadmium ion5.46E-04
35GO:0051085: chaperone mediated protein folding requiring cofactor5.54E-04
36GO:0043481: anthocyanin accumulation in tissues in response to UV light5.54E-04
37GO:0009052: pentose-phosphate shunt, non-oxidative branch5.54E-04
38GO:0000271: polysaccharide biosynthetic process5.80E-04
39GO:0019676: ammonia assimilation cycle7.37E-04
40GO:0009765: photosynthesis, light harvesting7.37E-04
41GO:0006085: acetyl-CoA biosynthetic process7.37E-04
42GO:0006546: glycine catabolic process7.37E-04
43GO:0006542: glutamine biosynthetic process7.37E-04
44GO:0044209: AMP salvage9.32E-04
45GO:0071555: cell wall organization1.03E-03
46GO:0045490: pectin catabolic process1.03E-03
47GO:0006555: methionine metabolic process1.14E-03
48GO:0070814: hydrogen sulfide biosynthetic process1.14E-03
49GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.14E-03
50GO:0009635: response to herbicide1.14E-03
51GO:0010555: response to mannitol1.36E-03
52GO:0009735: response to cytokinin1.36E-03
53GO:0045995: regulation of embryonic development1.59E-03
54GO:0048437: floral organ development1.59E-03
55GO:0007568: aging1.61E-03
56GO:0016051: carbohydrate biosynthetic process1.77E-03
57GO:0052543: callose deposition in cell wall1.84E-03
58GO:0007155: cell adhesion1.84E-03
59GO:0048564: photosystem I assembly1.84E-03
60GO:0009642: response to light intensity1.84E-03
61GO:0006875: cellular metal ion homeostasis1.84E-03
62GO:0022900: electron transport chain2.10E-03
63GO:0006526: arginine biosynthetic process2.10E-03
64GO:0045337: farnesyl diphosphate biosynthetic process2.37E-03
65GO:0033384: geranyl diphosphate biosynthetic process2.37E-03
66GO:0006754: ATP biosynthetic process2.37E-03
67GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.42E-03
68GO:0035999: tetrahydrofolate interconversion2.65E-03
69GO:0010192: mucilage biosynthetic process2.95E-03
70GO:0009970: cellular response to sulfate starvation2.95E-03
71GO:0000103: sulfate assimilation2.95E-03
72GO:0000038: very long-chain fatty acid metabolic process3.25E-03
73GO:0018119: peptidyl-cysteine S-nitrosylation3.25E-03
74GO:0048229: gametophyte development3.25E-03
75GO:0045037: protein import into chloroplast stroma3.57E-03
76GO:0015706: nitrate transport3.57E-03
77GO:0030036: actin cytoskeleton organization3.89E-03
78GO:0010075: regulation of meristem growth3.89E-03
79GO:0009934: regulation of meristem structural organization4.22E-03
80GO:0010020: chloroplast fission4.22E-03
81GO:0019253: reductive pentose-phosphate cycle4.22E-03
82GO:0008152: metabolic process4.30E-03
83GO:0010167: response to nitrate4.57E-03
84GO:0009833: plant-type primary cell wall biogenesis4.92E-03
85GO:0010025: wax biosynthetic process4.92E-03
86GO:0019344: cysteine biosynthetic process5.28E-03
87GO:0008299: isoprenoid biosynthetic process5.65E-03
88GO:0006418: tRNA aminoacylation for protein translation5.65E-03
89GO:0009768: photosynthesis, light harvesting in photosystem I5.65E-03
90GO:0009790: embryo development6.28E-03
91GO:0030245: cellulose catabolic process6.42E-03
92GO:0009814: defense response, incompatible interaction6.42E-03
93GO:0009294: DNA mediated transformation6.82E-03
94GO:0019722: calcium-mediated signaling7.23E-03
95GO:0048653: anther development8.07E-03
96GO:0042335: cuticle development8.07E-03
97GO:0000413: protein peptidyl-prolyl isomerization8.07E-03
98GO:0048868: pollen tube development8.50E-03
99GO:0019252: starch biosynthetic process9.39E-03
100GO:0016032: viral process1.03E-02
101GO:0006457: protein folding1.09E-02
102GO:0009658: chloroplast organization1.15E-02
103GO:0010286: heat acclimation1.18E-02
104GO:0007267: cell-cell signaling1.18E-02
105GO:0016126: sterol biosynthetic process1.28E-02
106GO:0009911: positive regulation of flower development1.28E-02
107GO:0009607: response to biotic stimulus1.33E-02
108GO:0009627: systemic acquired resistance1.38E-02
109GO:0042128: nitrate assimilation1.38E-02
110GO:0015995: chlorophyll biosynthetic process1.43E-02
111GO:0016049: cell growth1.49E-02
112GO:0055114: oxidation-reduction process1.50E-02
113GO:0008219: cell death1.54E-02
114GO:0009817: defense response to fungus, incompatible interaction1.54E-02
115GO:0030244: cellulose biosynthetic process1.54E-02
116GO:0018298: protein-chromophore linkage1.54E-02
117GO:0009832: plant-type cell wall biogenesis1.60E-02
118GO:0009793: embryo development ending in seed dormancy1.62E-02
119GO:0015979: photosynthesis1.63E-02
120GO:0010218: response to far red light1.65E-02
121GO:0009637: response to blue light1.82E-02
122GO:0042742: defense response to bacterium1.92E-02
123GO:0006839: mitochondrial transport2.00E-02
124GO:0006631: fatty acid metabolic process2.06E-02
125GO:0010114: response to red light2.18E-02
126GO:0042538: hyperosmotic salinity response2.57E-02
127GO:0006857: oligopeptide transport2.83E-02
128GO:0048367: shoot system development3.11E-02
129GO:0042545: cell wall modification3.39E-02
RankGO TermAdjusted P value
1GO:0004358: glutamate N-acetyltransferase activity0.00E+00
2GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
3GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
4GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
5GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
6GO:0046905: phytoene synthase activity0.00E+00
7GO:0050613: delta14-sterol reductase activity0.00E+00
8GO:0008179: adenylate cyclase binding0.00E+00
9GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
10GO:0044183: protein binding involved in protein folding2.59E-06
11GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity4.63E-06
12GO:0047259: glucomannan 4-beta-mannosyltransferase activity9.88E-05
13GO:0004013: adenosylhomocysteinase activity9.88E-05
14GO:0004831: tyrosine-tRNA ligase activity9.88E-05
15GO:0051996: squalene synthase activity9.88E-05
16GO:0004001: adenosine kinase activity9.88E-05
17GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity9.88E-05
18GO:0015088: copper uptake transmembrane transporter activity9.88E-05
19GO:0004047: aminomethyltransferase activity2.32E-04
20GO:0004312: fatty acid synthase activity2.32E-04
21GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity2.32E-04
22GO:0004802: transketolase activity2.32E-04
23GO:0004310: farnesyl-diphosphate farnesyltransferase activity2.32E-04
24GO:0003979: UDP-glucose 6-dehydrogenase activity3.86E-04
25GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity3.86E-04
26GO:0004148: dihydrolipoyl dehydrogenase activity3.86E-04
27GO:0004751: ribose-5-phosphate isomerase activity3.86E-04
28GO:0004781: sulfate adenylyltransferase (ATP) activity3.86E-04
29GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.20E-04
30GO:0030570: pectate lyase activity4.58E-04
31GO:0051082: unfolded protein binding5.21E-04
32GO:0001872: (1->3)-beta-D-glucan binding5.54E-04
33GO:0003878: ATP citrate synthase activity5.54E-04
34GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor5.54E-04
35GO:0016758: transferase activity, transferring hexosyl groups6.67E-04
36GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity7.37E-04
37GO:0016829: lyase activity7.62E-04
38GO:0004356: glutamate-ammonia ligase activity9.32E-04
39GO:0016722: oxidoreductase activity, oxidizing metal ions9.73E-04
40GO:0005200: structural constituent of cytoskeleton9.73E-04
41GO:0051920: peroxiredoxin activity1.36E-03
42GO:0102391: decanoate--CoA ligase activity1.36E-03
43GO:0051753: mannan synthase activity1.36E-03
44GO:0004467: long-chain fatty acid-CoA ligase activity1.59E-03
45GO:0016209: antioxidant activity1.84E-03
46GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism2.37E-03
47GO:0004337: geranyltranstransferase activity2.37E-03
48GO:0016757: transferase activity, transferring glycosyl groups2.55E-03
49GO:0015112: nitrate transmembrane transporter activity2.65E-03
50GO:0005381: iron ion transmembrane transporter activity2.65E-03
51GO:0051287: NAD binding2.73E-03
52GO:0004161: dimethylallyltranstransferase activity3.25E-03
53GO:0004565: beta-galactosidase activity3.89E-03
54GO:0030599: pectinesterase activity4.06E-03
55GO:0005524: ATP binding4.76E-03
56GO:0031409: pigment binding4.92E-03
57GO:0102336: 3-oxo-arachidoyl-CoA synthase activity4.92E-03
58GO:0102337: 3-oxo-cerotoyl-CoA synthase activity4.92E-03
59GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity4.92E-03
60GO:0019706: protein-cysteine S-palmitoyltransferase activity6.03E-03
61GO:0033612: receptor serine/threonine kinase binding6.03E-03
62GO:0016760: cellulose synthase (UDP-forming) activity6.82E-03
63GO:0008810: cellulase activity6.82E-03
64GO:0004812: aminoacyl-tRNA ligase activity7.64E-03
65GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.12E-02
66GO:0016759: cellulose synthase activity1.13E-02
67GO:0008483: transaminase activity1.18E-02
68GO:0005507: copper ion binding1.23E-02
69GO:0016168: chlorophyll binding1.33E-02
70GO:0030247: polysaccharide binding1.43E-02
71GO:0003746: translation elongation factor activity1.82E-02
72GO:0051537: 2 iron, 2 sulfur cluster binding2.31E-02
73GO:0043621: protein self-association2.31E-02
74GO:0015293: symporter activity2.37E-02
75GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.44E-02
76GO:0016491: oxidoreductase activity2.72E-02
77GO:0003777: microtubule motor activity2.90E-02
78GO:0045330: aspartyl esterase activity2.90E-02
79GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.11E-02
80GO:0003729: mRNA binding3.16E-02
81GO:0004650: polygalacturonase activity3.25E-02
82GO:0003779: actin binding3.39E-02
83GO:0016740: transferase activity4.56E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0030864: cortical actin cytoskeleton0.00E+00
3GO:0009570: chloroplast stroma1.17E-15
4GO:0009941: chloroplast envelope1.84E-13
5GO:0009579: thylakoid1.60E-09
6GO:0009507: chloroplast6.94E-09
7GO:0048046: apoplast9.17E-09
8GO:0022626: cytosolic ribosome3.05E-06
9GO:0046658: anchored component of plasma membrane1.66E-05
10GO:0009505: plant-type cell wall6.14E-05
11GO:0045298: tubulin complex8.74E-05
12GO:0031225: anchored component of membrane1.18E-04
13GO:0016020: membrane1.57E-04
14GO:0045254: pyruvate dehydrogenase complex2.32E-04
15GO:0005618: cell wall2.75E-04
16GO:0009535: chloroplast thylakoid membrane2.78E-04
17GO:0000139: Golgi membrane4.10E-04
18GO:0009346: citrate lyase complex5.54E-04
19GO:0031897: Tic complex7.37E-04
20GO:0005886: plasma membrane8.64E-04
21GO:0005829: cytosol1.45E-03
22GO:0009539: photosystem II reaction center2.10E-03
23GO:0005802: trans-Golgi network3.19E-03
24GO:0005768: endosome3.88E-03
25GO:0005794: Golgi apparatus3.93E-03
26GO:0030659: cytoplasmic vesicle membrane4.22E-03
27GO:0030076: light-harvesting complex4.57E-03
28GO:0030176: integral component of endoplasmic reticulum membrane4.57E-03
29GO:0005875: microtubule associated complex4.92E-03
30GO:0010287: plastoglobule5.10E-03
31GO:0009654: photosystem II oxygen evolving complex5.65E-03
32GO:0005759: mitochondrial matrix6.76E-03
33GO:0009522: photosystem I8.94E-03
34GO:0009523: photosystem II9.39E-03
35GO:0009534: chloroplast thylakoid1.00E-02
36GO:0010319: stromule1.18E-02
37GO:0005874: microtubule1.38E-02
38GO:0005773: vacuole1.89E-02
39GO:0031977: thylakoid lumen2.06E-02
40GO:0009536: plastid2.49E-02
41GO:0005774: vacuolar membrane2.94E-02
42GO:0009706: chloroplast inner membrane3.47E-02
43GO:0009506: plasmodesma3.49E-02
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Gene type



Gene DE type