Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G35980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006182: cGMP biosynthetic process0.00E+00
2GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
3GO:0010055: atrichoblast differentiation0.00E+00
4GO:0043201: response to leucine0.00E+00
5GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
6GO:0080053: response to phenylalanine0.00E+00
7GO:0080052: response to histidine0.00E+00
8GO:0046865: terpenoid transport0.00E+00
9GO:0006793: phosphorus metabolic process0.00E+00
10GO:0051238: sequestering of metal ion0.00E+00
11GO:0042742: defense response to bacterium5.69E-09
12GO:0009620: response to fungus1.83E-07
13GO:0010120: camalexin biosynthetic process5.81E-07
14GO:0009682: induced systemic resistance2.91E-06
15GO:0006468: protein phosphorylation3.37E-06
16GO:0009617: response to bacterium4.30E-06
17GO:0006952: defense response4.95E-06
18GO:0009636: response to toxic substance9.65E-06
19GO:0006874: cellular calcium ion homeostasis1.83E-05
20GO:0071456: cellular response to hypoxia2.70E-05
21GO:0006855: drug transmembrane transport1.14E-04
22GO:0006536: glutamate metabolic process1.19E-04
23GO:0010200: response to chitin1.58E-04
24GO:0002238: response to molecule of fungal origin2.60E-04
25GO:0009817: defense response to fungus, incompatible interaction2.79E-04
26GO:0009407: toxin catabolic process3.27E-04
27GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.49E-04
28GO:0009751: response to salicylic acid3.65E-04
29GO:0042759: long-chain fatty acid biosynthetic process4.56E-04
30GO:0032107: regulation of response to nutrient levels4.56E-04
31GO:0051938: L-glutamate import4.56E-04
32GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.56E-04
33GO:0010726: positive regulation of hydrogen peroxide metabolic process4.56E-04
34GO:0010421: hydrogen peroxide-mediated programmed cell death4.56E-04
35GO:0006569: tryptophan catabolic process4.56E-04
36GO:1901183: positive regulation of camalexin biosynthetic process4.56E-04
37GO:0032491: detection of molecule of fungal origin4.56E-04
38GO:0030091: protein repair5.61E-04
39GO:0051707: response to other organism6.09E-04
40GO:0010204: defense response signaling pathway, resistance gene-independent6.84E-04
41GO:0050832: defense response to fungus8.12E-04
42GO:0002229: defense response to oomycetes8.56E-04
43GO:0010193: response to ozone8.56E-04
44GO:0055114: oxidation-reduction process8.67E-04
45GO:0043091: L-arginine import9.85E-04
46GO:0051592: response to calcium ion9.85E-04
47GO:0080183: response to photooxidative stress9.85E-04
48GO:0015802: basic amino acid transport9.85E-04
49GO:0009805: coumarin biosynthetic process9.85E-04
50GO:0009866: induced systemic resistance, ethylene mediated signaling pathway9.85E-04
51GO:0002240: response to molecule of oomycetes origin9.85E-04
52GO:0044419: interspecies interaction between organisms9.85E-04
53GO:0043066: negative regulation of apoptotic process9.85E-04
54GO:0006423: cysteinyl-tRNA aminoacylation9.85E-04
55GO:0030003: cellular cation homeostasis9.85E-04
56GO:0042939: tripeptide transport9.85E-04
57GO:0009688: abscisic acid biosynthetic process1.12E-03
58GO:0006032: chitin catabolic process1.12E-03
59GO:0032259: methylation1.32E-03
60GO:0006790: sulfur compound metabolic process1.48E-03
61GO:0010351: lithium ion transport1.60E-03
62GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.60E-03
63GO:0015692: lead ion transport1.60E-03
64GO:0080168: abscisic acid transport1.60E-03
65GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.60E-03
66GO:0034051: negative regulation of plant-type hypersensitive response1.60E-03
67GO:0006556: S-adenosylmethionine biosynthetic process1.60E-03
68GO:0046854: phosphatidylinositol phosphorylation2.13E-03
69GO:0006979: response to oxidative stress2.23E-03
70GO:0006882: cellular zinc ion homeostasis2.32E-03
71GO:0046513: ceramide biosynthetic process2.32E-03
72GO:0046836: glycolipid transport2.32E-03
73GO:0019438: aromatic compound biosynthetic process2.32E-03
74GO:0033169: histone H3-K9 demethylation2.32E-03
75GO:0070301: cellular response to hydrogen peroxide2.32E-03
76GO:0030100: regulation of endocytosis2.32E-03
77GO:0010731: protein glutathionylation2.32E-03
78GO:0042938: dipeptide transport3.12E-03
79GO:0045227: capsule polysaccharide biosynthetic process3.12E-03
80GO:0045088: regulation of innate immune response3.12E-03
81GO:0033358: UDP-L-arabinose biosynthetic process3.12E-03
82GO:1901002: positive regulation of response to salt stress3.12E-03
83GO:0016998: cell wall macromolecule catabolic process3.20E-03
84GO:0003333: amino acid transmembrane transport3.20E-03
85GO:0034052: positive regulation of plant-type hypersensitive response4.00E-03
86GO:0000304: response to singlet oxygen4.00E-03
87GO:0030041: actin filament polymerization4.00E-03
88GO:0045487: gibberellin catabolic process4.00E-03
89GO:0042538: hyperosmotic salinity response4.77E-03
90GO:0007165: signal transduction4.89E-03
91GO:0006561: proline biosynthetic process4.95E-03
92GO:0010942: positive regulation of cell death4.95E-03
93GO:0015691: cadmium ion transport4.95E-03
94GO:0010256: endomembrane system organization4.95E-03
95GO:0006555: methionine metabolic process4.95E-03
96GO:0048544: recognition of pollen5.65E-03
97GO:0009753: response to jasmonic acid5.94E-03
98GO:0010555: response to mannitol5.98E-03
99GO:2000067: regulation of root morphogenesis5.98E-03
100GO:0019509: L-methionine salvage from methylthioadenosine5.98E-03
101GO:0045926: negative regulation of growth5.98E-03
102GO:1900056: negative regulation of leaf senescence7.07E-03
103GO:0019745: pentacyclic triterpenoid biosynthetic process7.07E-03
104GO:0030026: cellular manganese ion homeostasis7.07E-03
105GO:1900057: positive regulation of leaf senescence7.07E-03
106GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.07E-03
107GO:0050829: defense response to Gram-negative bacterium7.07E-03
108GO:0010252: auxin homeostasis7.88E-03
109GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.23E-03
110GO:1900150: regulation of defense response to fungus8.23E-03
111GO:0009850: auxin metabolic process8.23E-03
112GO:0009615: response to virus9.41E-03
113GO:0009699: phenylpropanoid biosynthetic process9.45E-03
114GO:0007186: G-protein coupled receptor signaling pathway9.45E-03
115GO:0010497: plasmodesmata-mediated intercellular transport9.45E-03
116GO:0009627: systemic acquired resistance1.05E-02
117GO:0009056: catabolic process1.07E-02
118GO:0009821: alkaloid biosynthetic process1.07E-02
119GO:0010112: regulation of systemic acquired resistance1.07E-02
120GO:0008202: steroid metabolic process1.21E-02
121GO:2000280: regulation of root development1.21E-02
122GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.21E-02
123GO:0008219: cell death1.23E-02
124GO:0010162: seed dormancy process1.35E-02
125GO:0055062: phosphate ion homeostasis1.35E-02
126GO:0009870: defense response signaling pathway, resistance gene-dependent1.35E-02
127GO:0006499: N-terminal protein myristoylation1.36E-02
128GO:0048527: lateral root development1.43E-02
129GO:0009611: response to wounding1.48E-02
130GO:0009750: response to fructose1.49E-02
131GO:0009684: indoleacetic acid biosynthetic process1.49E-02
132GO:0006816: calcium ion transport1.49E-02
133GO:0052544: defense response by callose deposition in cell wall1.49E-02
134GO:0009089: lysine biosynthetic process via diaminopimelate1.49E-02
135GO:0009073: aromatic amino acid family biosynthetic process1.49E-02
136GO:0012501: programmed cell death1.64E-02
137GO:0002213: defense response to insect1.64E-02
138GO:0010150: leaf senescence1.65E-02
139GO:0055046: microgametogenesis1.80E-02
140GO:0009718: anthocyanin-containing compound biosynthetic process1.80E-02
141GO:0006626: protein targeting to mitochondrion1.80E-02
142GO:0006631: fatty acid metabolic process1.86E-02
143GO:0007166: cell surface receptor signaling pathway1.96E-02
144GO:0010143: cutin biosynthetic process1.96E-02
145GO:0002237: response to molecule of bacterial origin1.96E-02
146GO:0070588: calcium ion transmembrane transport2.13E-02
147GO:0009969: xyloglucan biosynthetic process2.13E-02
148GO:0009225: nucleotide-sugar metabolic process2.13E-02
149GO:0010025: wax biosynthetic process2.30E-02
150GO:0005992: trehalose biosynthetic process2.48E-02
151GO:0009863: salicylic acid mediated signaling pathway2.48E-02
152GO:0030150: protein import into mitochondrial matrix2.48E-02
153GO:0080147: root hair cell development2.48E-02
154GO:0006812: cation transport2.54E-02
155GO:0009809: lignin biosynthetic process2.73E-02
156GO:0019748: secondary metabolic process3.03E-02
157GO:0006730: one-carbon metabolic process3.03E-02
158GO:0030433: ubiquitin-dependent ERAD pathway3.03E-02
159GO:0009737: response to abscisic acid3.10E-02
160GO:0009625: response to insect3.23E-02
161GO:0010227: floral organ abscission3.23E-02
162GO:0006012: galactose metabolic process3.23E-02
163GO:0009693: ethylene biosynthetic process3.23E-02
164GO:0009686: gibberellin biosynthetic process3.23E-02
165GO:0010584: pollen exine formation3.42E-02
166GO:0009561: megagametogenesis3.42E-02
167GO:0009723: response to ethylene3.43E-02
168GO:0009626: plant-type hypersensitive response3.44E-02
169GO:0080167: response to karrikin3.73E-02
170GO:0042545: cell wall modification3.77E-02
171GO:0009741: response to brassinosteroid4.04E-02
172GO:0006885: regulation of pH4.04E-02
173GO:0006814: sodium ion transport4.25E-02
174GO:0042752: regulation of circadian rhythm4.25E-02
175GO:0009851: auxin biosynthetic process4.47E-02
176GO:0006623: protein targeting to vacuole4.47E-02
177GO:0009749: response to glucose4.47E-02
178GO:0016032: viral process4.92E-02
179GO:0019761: glucosinolate biosynthetic process4.92E-02
RankGO TermAdjusted P value
1GO:0035885: exochitinase activity0.00E+00
2GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0008843: endochitinase activity0.00E+00
5GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
6GO:0016301: kinase activity3.26E-09
7GO:0004674: protein serine/threonine kinase activity1.00E-07
8GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.41E-06
9GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity3.16E-05
10GO:0005524: ATP binding3.66E-05
11GO:0004351: glutamate decarboxylase activity6.81E-05
12GO:0008171: O-methyltransferase activity7.31E-05
13GO:0010279: indole-3-acetic acid amido synthetase activity1.19E-04
14GO:0050660: flavin adenine dinucleotide binding1.20E-04
15GO:0005217: intracellular ligand-gated ion channel activity1.95E-04
16GO:0004970: ionotropic glutamate receptor activity1.95E-04
17GO:0015238: drug transmembrane transporter activity3.02E-04
18GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.49E-04
19GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.49E-04
20GO:0102391: decanoate--CoA ligase activity3.49E-04
21GO:0009055: electron carrier activity4.45E-04
22GO:0004467: long-chain fatty acid-CoA ligase activity4.49E-04
23GO:0010285: L,L-diaminopimelate aminotransferase activity4.56E-04
24GO:0031127: alpha-(1,2)-fucosyltransferase activity4.56E-04
25GO:0031957: very long-chain fatty acid-CoA ligase activity4.56E-04
26GO:0004364: glutathione transferase activity5.72E-04
27GO:0032454: histone demethylase activity (H3-K9 specific)9.85E-04
28GO:0004103: choline kinase activity9.85E-04
29GO:0050291: sphingosine N-acyltransferase activity9.85E-04
30GO:0045543: gibberellin 2-beta-dioxygenase activity9.85E-04
31GO:0010297: heteropolysaccharide binding9.85E-04
32GO:0004817: cysteine-tRNA ligase activity9.85E-04
33GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity9.85E-04
34GO:0050736: O-malonyltransferase activity9.85E-04
35GO:0042937: tripeptide transporter activity9.85E-04
36GO:0045735: nutrient reservoir activity1.23E-03
37GO:0004383: guanylate cyclase activity1.60E-03
38GO:0004478: methionine adenosyltransferase activity1.60E-03
39GO:0001664: G-protein coupled receptor binding1.60E-03
40GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity1.60E-03
41GO:0042409: caffeoyl-CoA O-methyltransferase activity1.60E-03
42GO:0031683: G-protein beta/gamma-subunit complex binding1.60E-03
43GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.79E-03
44GO:0004867: serine-type endopeptidase inhibitor activity2.13E-03
45GO:0030145: manganese ion binding2.30E-03
46GO:0015189: L-lysine transmembrane transporter activity2.32E-03
47GO:0017089: glycolipid transporter activity2.32E-03
48GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity2.32E-03
49GO:0015181: arginine transmembrane transporter activity2.32E-03
50GO:0042299: lupeol synthase activity2.32E-03
51GO:0010178: IAA-amino acid conjugate hydrolase activity2.32E-03
52GO:0030246: carbohydrate binding2.61E-03
53GO:0009916: alternative oxidase activity3.12E-03
54GO:0015368: calcium:cation antiporter activity3.12E-03
55GO:0050373: UDP-arabinose 4-epimerase activity3.12E-03
56GO:0042936: dipeptide transporter activity3.12E-03
57GO:0051861: glycolipid binding3.12E-03
58GO:0015369: calcium:proton antiporter activity3.12E-03
59GO:0005313: L-glutamate transmembrane transporter activity3.12E-03
60GO:0004031: aldehyde oxidase activity3.12E-03
61GO:0050302: indole-3-acetaldehyde oxidase activity3.12E-03
62GO:0016866: intramolecular transferase activity3.12E-03
63GO:0015297: antiporter activity3.53E-03
64GO:0046872: metal ion binding3.69E-03
65GO:0005496: steroid binding4.00E-03
66GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity4.00E-03
67GO:0004040: amidase activity4.00E-03
68GO:0004656: procollagen-proline 4-dioxygenase activity5.98E-03
69GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.98E-03
70GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.98E-03
71GO:0005261: cation channel activity5.98E-03
72GO:0003978: UDP-glucose 4-epimerase activity5.98E-03
73GO:0005085: guanyl-nucleotide exchange factor activity7.07E-03
74GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity7.07E-03
75GO:0015491: cation:cation antiporter activity8.23E-03
76GO:0004714: transmembrane receptor protein tyrosine kinase activity8.23E-03
77GO:0004564: beta-fructofuranosidase activity8.23E-03
78GO:0004033: aldo-keto reductase (NADP) activity8.23E-03
79GO:0008142: oxysterol binding9.45E-03
80GO:0008417: fucosyltransferase activity1.07E-02
81GO:0030247: polysaccharide binding1.11E-02
82GO:0031490: chromatin DNA binding1.21E-02
83GO:0016844: strictosidine synthase activity1.21E-02
84GO:0004575: sucrose alpha-glucosidase activity1.21E-02
85GO:0015174: basic amino acid transmembrane transporter activity1.21E-02
86GO:0030170: pyridoxal phosphate binding1.25E-02
87GO:0004568: chitinase activity1.35E-02
88GO:0008559: xenobiotic-transporting ATPase activity1.49E-02
89GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.57E-02
90GO:0000976: transcription regulatory region sequence-specific DNA binding1.64E-02
91GO:0005262: calcium channel activity1.80E-02
92GO:0015114: phosphate ion transmembrane transporter activity1.80E-02
93GO:0005388: calcium-transporting ATPase activity1.80E-02
94GO:0015266: protein channel activity1.80E-02
95GO:0004022: alcohol dehydrogenase (NAD) activity1.80E-02
96GO:0008061: chitin binding2.13E-02
97GO:0051537: 2 iron, 2 sulfur cluster binding2.19E-02
98GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.23E-02
99GO:0031418: L-ascorbic acid binding2.48E-02
100GO:0001046: core promoter sequence-specific DNA binding2.48E-02
101GO:0008168: methyltransferase activity2.73E-02
102GO:0005516: calmodulin binding2.85E-02
103GO:0015171: amino acid transmembrane transporter activity3.02E-02
104GO:0045330: aspartyl esterase activity3.02E-02
105GO:0004499: N,N-dimethylaniline monooxygenase activity3.42E-02
106GO:0030599: pectinesterase activity3.66E-02
107GO:0005451: monovalent cation:proton antiporter activity3.83E-02
108GO:0015035: protein disulfide oxidoreductase activity3.99E-02
109GO:0005199: structural constituent of cell wall4.04E-02
110GO:0008080: N-acetyltransferase activity4.04E-02
111GO:0005509: calcium ion binding4.07E-02
112GO:0052689: carboxylic ester hydrolase activity4.22E-02
113GO:0015299: solute:proton antiporter activity4.25E-02
114GO:0005506: iron ion binding4.53E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane9.54E-10
2GO:0005886: plasma membrane3.00E-08
3GO:0005576: extracellular region9.28E-05
4GO:0005911: cell-cell junction4.56E-04
5GO:0009530: primary cell wall1.60E-03
6GO:0070062: extracellular exosome2.32E-03
7GO:0032588: trans-Golgi network membrane4.95E-03
8GO:0005770: late endosome5.25E-03
9GO:0071944: cell periphery7.40E-03
10GO:0032580: Golgi cisterna membrane7.88E-03
11GO:0031305: integral component of mitochondrial inner membrane8.23E-03
12GO:0000325: plant-type vacuole1.43E-02
13GO:0005578: proteinaceous extracellular matrix1.80E-02
14GO:0031012: extracellular matrix1.80E-02
15GO:0005783: endoplasmic reticulum2.28E-02
16GO:0005618: cell wall2.40E-02
17GO:0070469: respiratory chain2.66E-02
18GO:0005744: mitochondrial inner membrane presequence translocase complex3.42E-02
19GO:0048046: apoplast4.23E-02
20GO:0005829: cytosol4.55E-02
21GO:0000145: exocyst4.92E-02
22GO:0000785: chromatin4.92E-02
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Gene type



Gene DE type