Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G35370

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070125: mitochondrial translational elongation0.00E+00
2GO:0009249: protein lipoylation0.00E+00
3GO:0015822: ornithine transport0.00E+00
4GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
5GO:0042821: pyridoxal biosynthetic process0.00E+00
6GO:0005996: monosaccharide metabolic process0.00E+00
7GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
8GO:0042820: vitamin B6 catabolic process0.00E+00
9GO:0009106: lipoate metabolic process0.00E+00
10GO:0006573: valine metabolic process0.00E+00
11GO:0090042: tubulin deacetylation0.00E+00
12GO:0008298: intracellular mRNA localization0.00E+00
13GO:0016117: carotenoid biosynthetic process2.18E-07
14GO:0009658: chloroplast organization4.96E-07
15GO:0019253: reductive pentose-phosphate cycle1.17E-06
16GO:0010275: NAD(P)H dehydrogenase complex assembly3.13E-06
17GO:0006810: transport8.58E-06
18GO:0009773: photosynthetic electron transport in photosystem I2.55E-05
19GO:0009767: photosynthetic electron transport chain3.96E-05
20GO:0019464: glycine decarboxylation via glycine cleavage system4.61E-05
21GO:0006546: glycine catabolic process4.61E-05
22GO:0016123: xanthophyll biosynthetic process7.32E-05
23GO:0016120: carotene biosynthetic process7.32E-05
24GO:0042026: protein refolding1.47E-04
25GO:0009409: response to cold1.63E-04
26GO:0048564: photosystem I assembly2.45E-04
27GO:0000066: mitochondrial ornithine transport2.60E-04
28GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process2.60E-04
29GO:0009443: pyridoxal 5'-phosphate salvage2.60E-04
30GO:0006438: valyl-tRNA aminoacylation2.60E-04
31GO:0010480: microsporocyte differentiation2.60E-04
32GO:0006551: leucine metabolic process2.60E-04
33GO:0071482: cellular response to light stimulus3.02E-04
34GO:0030388: fructose 1,6-bisphosphate metabolic process5.74E-04
35GO:0010270: photosystem II oxygen evolving complex assembly5.74E-04
36GO:0080183: response to photooxidative stress5.74E-04
37GO:0019684: photosynthesis, light reaction5.84E-04
38GO:0018119: peptidyl-cysteine S-nitrosylation5.84E-04
39GO:0015979: photosynthesis7.69E-04
40GO:0046686: response to cadmium ion8.43E-04
41GO:0010020: chloroplast fission8.52E-04
42GO:0009853: photorespiration9.08E-04
43GO:0006633: fatty acid biosynthetic process9.24E-04
44GO:0090506: axillary shoot meristem initiation9.31E-04
45GO:0000913: preprophase band assembly9.31E-04
46GO:0031022: nuclear migration along microfilament9.31E-04
47GO:0006000: fructose metabolic process9.31E-04
48GO:0006696: ergosterol biosynthetic process9.31E-04
49GO:2001295: malonyl-CoA biosynthetic process9.31E-04
50GO:0051085: chaperone mediated protein folding requiring cofactor1.33E-03
51GO:0009052: pentose-phosphate shunt, non-oxidative branch1.33E-03
52GO:0033014: tetrapyrrole biosynthetic process1.33E-03
53GO:0010731: protein glutathionylation1.33E-03
54GO:0016556: mRNA modification1.33E-03
55GO:0043572: plastid fission1.33E-03
56GO:2001141: regulation of RNA biosynthetic process1.33E-03
57GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.33E-03
58GO:0061077: chaperone-mediated protein folding1.41E-03
59GO:0006730: one-carbon metabolic process1.54E-03
60GO:0080092: regulation of pollen tube growth1.54E-03
61GO:0019676: ammonia assimilation cycle1.78E-03
62GO:0015976: carbon utilization1.78E-03
63GO:0009765: photosynthesis, light harvesting1.78E-03
64GO:0045727: positive regulation of translation1.78E-03
65GO:2000122: negative regulation of stomatal complex development1.78E-03
66GO:0009902: chloroplast relocation1.78E-03
67GO:0010037: response to carbon dioxide1.78E-03
68GO:0006542: glutamine biosynthetic process1.78E-03
69GO:0042631: cellular response to water deprivation2.13E-03
70GO:0009107: lipoate biosynthetic process2.27E-03
71GO:1902183: regulation of shoot apical meristem development2.27E-03
72GO:0006544: glycine metabolic process2.27E-03
73GO:0009904: chloroplast accumulation movement2.27E-03
74GO:0010236: plastoquinone biosynthetic process2.27E-03
75GO:0042549: photosystem II stabilization2.80E-03
76GO:0070814: hydrogen sulfide biosynthetic process2.80E-03
77GO:0016554: cytidine to uridine editing2.80E-03
78GO:0010190: cytochrome b6f complex assembly2.80E-03
79GO:0006563: L-serine metabolic process2.80E-03
80GO:0009735: response to cytokinin2.82E-03
81GO:0009416: response to light stimulus3.30E-03
82GO:0010067: procambium histogenesis3.36E-03
83GO:0009082: branched-chain amino acid biosynthetic process3.36E-03
84GO:0006458: 'de novo' protein folding3.36E-03
85GO:0017148: negative regulation of translation3.36E-03
86GO:0009099: valine biosynthetic process3.36E-03
87GO:0009903: chloroplast avoidance movement3.36E-03
88GO:0009854: oxidative photosynthetic carbon pathway3.36E-03
89GO:0048437: floral organ development3.97E-03
90GO:0010196: nonphotochemical quenching3.97E-03
91GO:0009645: response to low light intensity stimulus3.97E-03
92GO:0052543: callose deposition in cell wall4.60E-03
93GO:0016559: peroxisome fission4.60E-03
94GO:0008610: lipid biosynthetic process4.60E-03
95GO:0009704: de-etiolation4.60E-03
96GO:0006002: fructose 6-phosphate metabolic process5.27E-03
97GO:0006075: (1->3)-beta-D-glucan biosynthetic process5.27E-03
98GO:0048193: Golgi vesicle transport5.27E-03
99GO:0009657: plastid organization5.27E-03
100GO:0009097: isoleucine biosynthetic process5.27E-03
101GO:0010100: negative regulation of photomorphogenesis5.27E-03
102GO:0006526: arginine biosynthetic process5.27E-03
103GO:0032544: plastid translation5.27E-03
104GO:0017004: cytochrome complex assembly5.27E-03
105GO:0018298: protein-chromophore linkage5.32E-03
106GO:0007623: circadian rhythm5.68E-03
107GO:0010206: photosystem II repair5.98E-03
108GO:2000024: regulation of leaf development5.98E-03
109GO:0006783: heme biosynthetic process5.98E-03
110GO:0000902: cell morphogenesis5.98E-03
111GO:0006779: porphyrin-containing compound biosynthetic process6.71E-03
112GO:0035999: tetrahydrofolate interconversion6.71E-03
113GO:1900865: chloroplast RNA modification6.71E-03
114GO:0010192: mucilage biosynthetic process7.47E-03
115GO:0009970: cellular response to sulfate starvation7.47E-03
116GO:0009870: defense response signaling pathway, resistance gene-dependent7.47E-03
117GO:0000103: sulfate assimilation7.47E-03
118GO:0006839: mitochondrial transport7.69E-03
119GO:0000038: very long-chain fatty acid metabolic process8.27E-03
120GO:0009089: lysine biosynthetic process via diaminopimelate8.27E-03
121GO:0006352: DNA-templated transcription, initiation8.27E-03
122GO:0006415: translational termination8.27E-03
123GO:0000272: polysaccharide catabolic process8.27E-03
124GO:0048229: gametophyte development8.27E-03
125GO:0009744: response to sucrose8.70E-03
126GO:0045037: protein import into chloroplast stroma9.09E-03
127GO:0009636: response to toxic substance9.79E-03
128GO:0010075: regulation of meristem growth9.94E-03
129GO:0006094: gluconeogenesis9.94E-03
130GO:0005986: sucrose biosynthetic process9.94E-03
131GO:0006006: glucose metabolic process9.94E-03
132GO:0009934: regulation of meristem structural organization1.08E-02
133GO:0010207: photosystem II assembly1.08E-02
134GO:0010223: secondary shoot formation1.08E-02
135GO:0042742: defense response to bacterium1.13E-02
136GO:0007031: peroxisome organization1.17E-02
137GO:0042343: indole glucosinolate metabolic process1.17E-02
138GO:0090351: seedling development1.17E-02
139GO:0006636: unsaturated fatty acid biosynthetic process1.27E-02
140GO:0009833: plant-type primary cell wall biogenesis1.27E-02
141GO:0009944: polarity specification of adaxial/abaxial axis1.36E-02
142GO:0006096: glycolytic process1.39E-02
143GO:0046777: protein autophosphorylation1.42E-02
144GO:0016575: histone deacetylation1.46E-02
145GO:0006418: tRNA aminoacylation for protein translation1.46E-02
146GO:0009768: photosynthesis, light harvesting in photosystem I1.46E-02
147GO:0098542: defense response to other organism1.56E-02
148GO:0016226: iron-sulfur cluster assembly1.67E-02
149GO:0007005: mitochondrion organization1.67E-02
150GO:0001944: vasculature development1.77E-02
151GO:0055114: oxidation-reduction process1.83E-02
152GO:0010089: xylem development1.88E-02
153GO:0048653: anther development2.11E-02
154GO:0042335: cuticle development2.11E-02
155GO:0010087: phloem or xylem histogenesis2.11E-02
156GO:0008360: regulation of cell shape2.22E-02
157GO:0007018: microtubule-based movement2.34E-02
158GO:0019252: starch biosynthetic process2.46E-02
159GO:0010583: response to cyclopentenone2.70E-02
160GO:0016032: viral process2.70E-02
161GO:0010090: trichome morphogenesis2.83E-02
162GO:0010286: heat acclimation3.09E-02
163GO:0000910: cytokinesis3.22E-02
164GO:0009607: response to biotic stimulus3.49E-02
165GO:0009627: systemic acquired resistance3.63E-02
166GO:0042128: nitrate assimilation3.63E-02
167GO:0048481: plant ovule development4.05E-02
168GO:0009817: defense response to fungus, incompatible interaction4.05E-02
169GO:0030244: cellulose biosynthetic process4.05E-02
170GO:0008219: cell death4.05E-02
171GO:0009832: plant-type cell wall biogenesis4.20E-02
172GO:0009407: toxin catabolic process4.34E-02
173GO:0007568: aging4.49E-02
174GO:0010119: regulation of stomatal movement4.49E-02
175GO:0016051: carbohydrate biosynthetic process4.79E-02
RankGO TermAdjusted P value
1GO:0004358: glutamate N-acetyltransferase activity0.00E+00
2GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
3GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
4GO:0016719: carotene 7,8-desaturase activity0.00E+00
5GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
6GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
7GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
8GO:0051721: protein phosphatase 2A binding0.00E+00
9GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
10GO:0042903: tubulin deacetylase activity0.00E+00
11GO:0043014: alpha-tubulin binding0.00E+00
12GO:0045435: lycopene epsilon cyclase activity0.00E+00
13GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
14GO:0046905: phytoene synthase activity0.00E+00
15GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
16GO:0008465: glycerate dehydrogenase activity0.00E+00
17GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
18GO:0004326: tetrahydrofolylpolyglutamate synthase activity3.13E-06
19GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.47E-04
20GO:0004033: aldo-keto reductase (NADP) activity2.45E-04
21GO:0009496: plastoquinol--plastocyanin reductase activity2.60E-04
22GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity2.60E-04
23GO:0003984: acetolactate synthase activity2.60E-04
24GO:0004325: ferrochelatase activity2.60E-04
25GO:0051996: squalene synthase activity2.60E-04
26GO:0010313: phytochrome binding2.60E-04
27GO:0004832: valine-tRNA ligase activity2.60E-04
28GO:0004618: phosphoglycerate kinase activity5.74E-04
29GO:0010297: heteropolysaccharide binding5.74E-04
30GO:0016415: octanoyltransferase activity5.74E-04
31GO:0004047: aminomethyltransferase activity5.74E-04
32GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity5.74E-04
33GO:0000064: L-ornithine transmembrane transporter activity5.74E-04
34GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase5.74E-04
35GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity5.74E-04
36GO:0004310: farnesyl-diphosphate farnesyltransferase activity5.74E-04
37GO:0008967: phosphoglycolate phosphatase activity5.74E-04
38GO:0010291: carotene beta-ring hydroxylase activity5.74E-04
39GO:0017118: lipoyltransferase activity5.74E-04
40GO:0042389: omega-3 fatty acid desaturase activity5.74E-04
41GO:0044183: protein binding involved in protein folding5.84E-04
42GO:0005089: Rho guanyl-nucleotide exchange factor activity5.84E-04
43GO:0008266: poly(U) RNA binding8.52E-04
44GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity9.31E-04
45GO:0003913: DNA photolyase activity9.31E-04
46GO:0032947: protein complex scaffold9.31E-04
47GO:0004148: dihydrolipoyl dehydrogenase activity9.31E-04
48GO:0004075: biotin carboxylase activity9.31E-04
49GO:0004751: ribose-5-phosphate isomerase activity9.31E-04
50GO:0004781: sulfate adenylyltransferase (ATP) activity9.31E-04
51GO:0070402: NADPH binding9.31E-04
52GO:0005528: FK506 binding1.17E-03
53GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.33E-03
54GO:0001872: (1->3)-beta-D-glucan binding1.33E-03
55GO:0004375: glycine dehydrogenase (decarboxylating) activity1.33E-03
56GO:0048027: mRNA 5'-UTR binding1.33E-03
57GO:0048487: beta-tubulin binding1.33E-03
58GO:0016149: translation release factor activity, codon specific1.33E-03
59GO:0051537: 2 iron, 2 sulfur cluster binding1.37E-03
60GO:0004176: ATP-dependent peptidase activity1.41E-03
61GO:0033612: receptor serine/threonine kinase binding1.41E-03
62GO:0005198: structural molecule activity1.44E-03
63GO:0001053: plastid sigma factor activity1.78E-03
64GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.78E-03
65GO:0016987: sigma factor activity1.78E-03
66GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.78E-03
67GO:0003989: acetyl-CoA carboxylase activity2.27E-03
68GO:0008374: O-acyltransferase activity2.27E-03
69GO:0004372: glycine hydroxymethyltransferase activity2.27E-03
70GO:0004356: glutamate-ammonia ligase activity2.27E-03
71GO:0080030: methyl indole-3-acetate esterase activity2.80E-03
72GO:0042578: phosphoric ester hydrolase activity2.80E-03
73GO:0051082: unfolded protein binding2.83E-03
74GO:0005509: calcium ion binding2.93E-03
75GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.36E-03
76GO:0016597: amino acid binding3.85E-03
77GO:0009881: photoreceptor activity3.97E-03
78GO:0043295: glutathione binding3.97E-03
79GO:0003843: 1,3-beta-D-glucan synthase activity5.27E-03
80GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)5.27E-03
81GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.27E-03
82GO:0003747: translation release factor activity5.98E-03
83GO:0015386: potassium:proton antiporter activity8.27E-03
84GO:0004364: glutathione transferase activity8.36E-03
85GO:0043621: protein self-association9.42E-03
86GO:0004565: beta-galactosidase activity9.94E-03
87GO:0008081: phosphoric diester hydrolase activity9.94E-03
88GO:0004089: carbonate dehydratase activity9.94E-03
89GO:0031072: heat shock protein binding9.94E-03
90GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.02E-02
91GO:0051287: NAD binding1.06E-02
92GO:0031409: pigment binding1.27E-02
93GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.27E-02
94GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.27E-02
95GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.27E-02
96GO:0003824: catalytic activity1.33E-02
97GO:0051536: iron-sulfur cluster binding1.36E-02
98GO:0004407: histone deacetylase activity1.36E-02
99GO:0015079: potassium ion transmembrane transporter activity1.46E-02
100GO:0008324: cation transmembrane transporter activity1.46E-02
101GO:0016760: cellulose synthase (UDP-forming) activity1.77E-02
102GO:0003756: protein disulfide isomerase activity1.88E-02
103GO:0004812: aminoacyl-tRNA ligase activity1.99E-02
104GO:0005102: receptor binding1.99E-02
105GO:0019843: rRNA binding2.10E-02
106GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.16E-02
107GO:0050662: coenzyme binding2.34E-02
108GO:0048038: quinone binding2.58E-02
109GO:0004518: nuclease activity2.70E-02
110GO:0016759: cellulose synthase activity2.96E-02
111GO:0008483: transaminase activity3.09E-02
112GO:0008237: metallopeptidase activity3.09E-02
113GO:0016168: chlorophyll binding3.49E-02
114GO:0009931: calcium-dependent protein serine/threonine kinase activity3.63E-02
115GO:0042802: identical protein binding3.69E-02
116GO:0030247: polysaccharide binding3.77E-02
117GO:0004683: calmodulin-dependent protein kinase activity3.77E-02
118GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding3.91E-02
119GO:0008236: serine-type peptidase activity3.91E-02
120GO:0004222: metalloendopeptidase activity4.34E-02
121GO:0050897: cobalt ion binding4.49E-02
122GO:0003746: translation elongation factor activity4.79E-02
123GO:0005524: ATP binding4.85E-02
124GO:0000987: core promoter proximal region sequence-specific DNA binding4.94E-02
125GO:0005515: protein binding4.96E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
2GO:0005948: acetolactate synthase complex0.00E+00
3GO:0009507: chloroplast2.91E-55
4GO:0009535: chloroplast thylakoid membrane1.64E-24
5GO:0009941: chloroplast envelope2.52E-22
6GO:0009570: chloroplast stroma2.50E-21
7GO:0009543: chloroplast thylakoid lumen1.24E-12
8GO:0009579: thylakoid3.93E-12
9GO:0009654: photosystem II oxygen evolving complex8.87E-10
10GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.15E-09
11GO:0010319: stromule3.33E-08
12GO:0009534: chloroplast thylakoid1.14E-07
13GO:0031977: thylakoid lumen4.38E-07
14GO:0019898: extrinsic component of membrane5.02E-07
15GO:0030095: chloroplast photosystem II1.17E-06
16GO:0031969: chloroplast membrane1.30E-05
17GO:0048046: apoplast8.35E-05
18GO:0009782: photosystem I antenna complex2.60E-04
19GO:0000427: plastid-encoded plastid RNA polymerase complex5.74E-04
20GO:0042170: plastid membrane5.74E-04
21GO:0010287: plastoglobule6.04E-04
22GO:0005759: mitochondrial matrix9.24E-04
23GO:0009509: chromoplast9.31E-04
24GO:0005960: glycine cleavage complex1.33E-03
25GO:0055035: plastid thylakoid membrane2.27E-03
26GO:0009512: cytochrome b6f complex2.27E-03
27GO:0009706: chloroplast inner membrane2.83E-03
28GO:0005623: cell3.90E-03
29GO:0005779: integral component of peroxisomal membrane5.27E-03
30GO:0009539: photosystem II reaction center5.27E-03
31GO:0000148: 1,3-beta-D-glucan synthase complex5.27E-03
32GO:0016324: apical plasma membrane7.47E-03
33GO:0000311: plastid large ribosomal subunit9.09E-03
34GO:0009508: plastid chromosome9.94E-03
35GO:0022626: cytosolic ribosome1.16E-02
36GO:0030076: light-harvesting complex1.17E-02
37GO:0042651: thylakoid membrane1.46E-02
38GO:0009532: plastid stroma1.56E-02
39GO:0016020: membrane1.80E-02
40GO:0005871: kinesin complex1.99E-02
41GO:0009504: cell plate2.46E-02
42GO:0009523: photosystem II2.46E-02
43GO:0005694: chromosome2.70E-02
44GO:0009295: nucleoid3.09E-02
45GO:0005778: peroxisomal membrane3.09E-02
46GO:0046658: anchored component of plasma membrane3.84E-02
47GO:0009707: chloroplast outer membrane4.05E-02
48GO:0015934: large ribosomal subunit4.49E-02
49GO:0009505: plant-type cell wall4.87E-02
<
Gene type



Gene DE type