Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G34620

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0045014: negative regulation of transcription by glucose0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0010430: fatty acid omega-oxidation0.00E+00
4GO:0042493: response to drug0.00E+00
5GO:0042371: vitamin K biosynthetic process0.00E+00
6GO:1905499: trichome papilla formation0.00E+00
7GO:0010115: regulation of abscisic acid biosynthetic process1.77E-06
8GO:0010143: cutin biosynthetic process2.45E-05
9GO:0010025: wax biosynthetic process3.55E-05
10GO:0042372: phylloquinone biosynthetic process9.18E-05
11GO:0009772: photosynthetic electron transport in photosystem II1.22E-04
12GO:0042254: ribosome biogenesis1.89E-04
13GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.93E-04
14GO:0060627: regulation of vesicle-mediated transport1.93E-04
15GO:0046520: sphingoid biosynthetic process1.93E-04
16GO:0010442: guard cell morphogenesis1.93E-04
17GO:0042759: long-chain fatty acid biosynthetic process1.93E-04
18GO:0052541: plant-type cell wall cellulose metabolic process4.33E-04
19GO:0010198: synergid death4.33E-04
20GO:0016042: lipid catabolic process5.38E-04
21GO:0006631: fatty acid metabolic process6.61E-04
22GO:0006833: water transport7.02E-04
23GO:0015840: urea transport7.06E-04
24GO:0015714: phosphoenolpyruvate transport7.06E-04
25GO:0006696: ergosterol biosynthetic process7.06E-04
26GO:0006166: purine ribonucleoside salvage1.01E-03
27GO:0071484: cellular response to light intensity1.01E-03
28GO:0051639: actin filament network formation1.01E-03
29GO:0009650: UV protection1.01E-03
30GO:0046739: transport of virus in multicellular host1.01E-03
31GO:0006168: adenine salvage1.01E-03
32GO:0015689: molybdate ion transport1.34E-03
33GO:0051764: actin crosslink formation1.34E-03
34GO:0006183: GTP biosynthetic process1.34E-03
35GO:0022622: root system development1.34E-03
36GO:0015713: phosphoglycerate transport1.34E-03
37GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.56E-03
38GO:0044209: AMP salvage1.70E-03
39GO:0006665: sphingolipid metabolic process1.70E-03
40GO:0048359: mucilage metabolic process involved in seed coat development1.70E-03
41GO:0010236: plastoquinone biosynthetic process1.70E-03
42GO:0035435: phosphate ion transmembrane transport2.10E-03
43GO:0006561: proline biosynthetic process2.10E-03
44GO:0007267: cell-cell signaling2.38E-03
45GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity2.52E-03
46GO:0006694: steroid biosynthetic process2.52E-03
47GO:0006633: fatty acid biosynthetic process2.92E-03
48GO:0009610: response to symbiotic fungus2.96E-03
49GO:0032880: regulation of protein localization2.96E-03
50GO:0010411: xyloglucan metabolic process3.14E-03
51GO:0009808: lignin metabolic process3.93E-03
52GO:0010497: plasmodesmata-mediated intercellular transport3.93E-03
53GO:0006526: arginine biosynthetic process3.93E-03
54GO:0015780: nucleotide-sugar transport4.44E-03
55GO:0010206: photosystem II repair4.44E-03
56GO:0048589: developmental growth4.44E-03
57GO:0010205: photoinhibition4.99E-03
58GO:0042761: very long-chain fatty acid biosynthetic process4.99E-03
59GO:0071555: cell wall organization5.32E-03
60GO:0006949: syncytium formation5.55E-03
61GO:0009688: abscisic acid biosynthetic process5.55E-03
62GO:0043069: negative regulation of programmed cell death5.55E-03
63GO:0042546: cell wall biogenesis5.89E-03
64GO:0008643: carbohydrate transport6.12E-03
65GO:0009773: photosynthetic electron transport in photosystem I6.13E-03
66GO:0009750: response to fructose6.13E-03
67GO:0018119: peptidyl-cysteine S-nitrosylation6.13E-03
68GO:0016024: CDP-diacylglycerol biosynthetic process6.73E-03
69GO:0010152: pollen maturation6.73E-03
70GO:0042538: hyperosmotic salinity response7.11E-03
71GO:0009725: response to hormone7.36E-03
72GO:2000012: regulation of auxin polar transport7.36E-03
73GO:0010207: photosystem II assembly8.01E-03
74GO:0055114: oxidation-reduction process9.13E-03
75GO:0006071: glycerol metabolic process9.35E-03
76GO:0006636: unsaturated fatty acid biosynthetic process9.35E-03
77GO:0000027: ribosomal large subunit assembly1.01E-02
78GO:0051017: actin filament bundle assembly1.01E-02
79GO:0010026: trichome differentiation1.08E-02
80GO:0005975: carbohydrate metabolic process1.10E-02
81GO:0031408: oxylipin biosynthetic process1.15E-02
82GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.31E-02
83GO:0009411: response to UV1.31E-02
84GO:0048443: stamen development1.39E-02
85GO:0019722: calcium-mediated signaling1.39E-02
86GO:0010091: trichome branching1.39E-02
87GO:0006412: translation1.40E-02
88GO:0008284: positive regulation of cell proliferation1.47E-02
89GO:0042335: cuticle development1.55E-02
90GO:0034220: ion transmembrane transport1.55E-02
91GO:0000413: protein peptidyl-prolyl isomerization1.55E-02
92GO:0009958: positive gravitropism1.63E-02
93GO:0006520: cellular amino acid metabolic process1.63E-02
94GO:0010182: sugar mediated signaling pathway1.63E-02
95GO:0015986: ATP synthesis coupled proton transport1.72E-02
96GO:0009414: response to water deprivation1.80E-02
97GO:0007165: signal transduction1.89E-02
98GO:0045490: pectin catabolic process1.89E-02
99GO:0016132: brassinosteroid biosynthetic process1.90E-02
100GO:0002229: defense response to oomycetes1.90E-02
101GO:0010583: response to cyclopentenone1.99E-02
102GO:0009828: plant-type cell wall loosening2.18E-02
103GO:0016126: sterol biosynthetic process2.47E-02
104GO:0009627: systemic acquired resistance2.67E-02
105GO:0009826: unidimensional cell growth2.81E-02
106GO:0016311: dephosphorylation2.88E-02
107GO:0009813: flavonoid biosynthetic process3.09E-02
108GO:0010311: lateral root formation3.09E-02
109GO:0009834: plant-type secondary cell wall biogenesis3.20E-02
110GO:0007568: aging3.31E-02
111GO:0048527: lateral root development3.31E-02
112GO:0055085: transmembrane transport3.43E-02
113GO:0030001: metal ion transport3.87E-02
114GO:0009744: response to sucrose4.23E-02
115GO:0009640: photomorphogenesis4.23E-02
116GO:0010114: response to red light4.23E-02
117GO:0006869: lipid transport4.73E-02
118GO:0009664: plant-type cell wall organization4.96E-02
RankGO TermAdjusted P value
1GO:0050614: delta24-sterol reductase activity0.00E+00
2GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
3GO:0010301: xanthoxin dehydrogenase activity0.00E+00
4GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
5GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
6GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
7GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
8GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
9GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
10GO:0052689: carboxylic ester hydrolase activity4.49E-06
11GO:0001872: (1->3)-beta-D-glucan binding1.50E-05
12GO:0016788: hydrolase activity, acting on ester bonds1.89E-04
13GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity1.93E-04
14GO:0000170: sphingosine hydroxylase activity1.93E-04
15GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity1.93E-04
16GO:0080132: fatty acid alpha-hydroxylase activity1.93E-04
17GO:0015121: phosphoenolpyruvate:phosphate antiporter activity1.93E-04
18GO:0031957: very long-chain fatty acid-CoA ligase activity1.93E-04
19GO:0009374: biotin binding1.93E-04
20GO:0015200: methylammonium transmembrane transporter activity1.93E-04
21GO:0003938: IMP dehydrogenase activity4.33E-04
22GO:0042284: sphingolipid delta-4 desaturase activity4.33E-04
23GO:0046593: mandelonitrile lyase activity4.33E-04
24GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.27E-04
25GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor7.06E-04
26GO:0005504: fatty acid binding7.06E-04
27GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.88E-04
28GO:0003999: adenine phosphoribosyltransferase activity1.01E-03
29GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.01E-03
30GO:0030570: pectate lyase activity1.11E-03
31GO:0008514: organic anion transmembrane transporter activity1.20E-03
32GO:0010011: auxin binding1.34E-03
33GO:0052793: pectin acetylesterase activity1.34E-03
34GO:0004506: squalene monooxygenase activity1.34E-03
35GO:0015098: molybdate ion transmembrane transporter activity1.34E-03
36GO:0045430: chalcone isomerase activity1.34E-03
37GO:0015204: urea transmembrane transporter activity1.34E-03
38GO:0015120: phosphoglycerate transmembrane transporter activity1.34E-03
39GO:0004659: prenyltransferase activity1.34E-03
40GO:0003989: acetyl-CoA carboxylase activity1.70E-03
41GO:0009922: fatty acid elongase activity1.70E-03
42GO:0004040: amidase activity1.70E-03
43GO:0016762: xyloglucan:xyloglucosyl transferase activity1.85E-03
44GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.10E-03
45GO:0016208: AMP binding2.10E-03
46GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.10E-03
47GO:0008519: ammonium transmembrane transporter activity2.10E-03
48GO:0019843: rRNA binding2.19E-03
49GO:0016832: aldehyde-lyase activity2.52E-03
50GO:0102391: decanoate--CoA ligase activity2.52E-03
51GO:0015250: water channel activity2.67E-03
52GO:0004467: long-chain fatty acid-CoA ligase activity2.96E-03
53GO:0016798: hydrolase activity, acting on glycosyl bonds3.14E-03
54GO:0030247: polysaccharide binding3.14E-03
55GO:0030674: protein binding, bridging3.43E-03
56GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.93E-03
57GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.01E-03
58GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors4.44E-03
59GO:0008889: glycerophosphodiester phosphodiesterase activity4.44E-03
60GO:0003993: acid phosphatase activity4.60E-03
61GO:0003735: structural constituent of ribosome5.66E-03
62GO:0050660: flavin adenine dinucleotide binding6.90E-03
63GO:0015114: phosphate ion transmembrane transporter activity7.36E-03
64GO:0004565: beta-galactosidase activity7.36E-03
65GO:0004022: alcohol dehydrogenase (NAD) activity7.36E-03
66GO:0008083: growth factor activity8.01E-03
67GO:0016491: oxidoreductase activity8.59E-03
68GO:0008146: sulfotransferase activity8.67E-03
69GO:0004650: polygalacturonase activity9.93E-03
70GO:0005528: FK506 binding1.01E-02
71GO:0004707: MAP kinase activity1.15E-02
72GO:0016829: lyase activity1.48E-02
73GO:0008080: N-acetyltransferase activity1.63E-02
74GO:0046933: proton-transporting ATP synthase activity, rotational mechanism1.63E-02
75GO:0019901: protein kinase binding1.81E-02
76GO:0004872: receptor activity1.81E-02
77GO:0051015: actin filament binding2.08E-02
78GO:0016791: phosphatase activity2.18E-02
79GO:0016722: oxidoreductase activity, oxidizing metal ions2.27E-02
80GO:0046983: protein dimerization activity2.86E-02
81GO:0008236: serine-type peptidase activity2.88E-02
82GO:0004674: protein serine/threonine kinase activity3.20E-02
83GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.20E-02
84GO:0005507: copper ion binding3.96E-02
85GO:0005516: calmodulin binding4.23E-02
86GO:0004722: protein serine/threonine phosphatase activity4.73E-02
87GO:0051287: NAD binding4.84E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
3GO:0031225: anchored component of membrane4.56E-08
4GO:0009505: plant-type cell wall5.43E-08
5GO:0005576: extracellular region1.53E-06
6GO:0005886: plasma membrane5.97E-06
7GO:0046658: anchored component of plasma membrane1.33E-05
8GO:0009506: plasmodesma2.04E-05
9GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex1.93E-04
10GO:0009923: fatty acid elongase complex1.93E-04
11GO:0048046: apoplast2.35E-04
12GO:0031969: chloroplast membrane2.77E-04
13GO:0009317: acetyl-CoA carboxylase complex7.06E-04
14GO:0032432: actin filament bundle1.01E-03
15GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)2.10E-03
16GO:0009579: thylakoid2.11E-03
17GO:0009543: chloroplast thylakoid lumen2.19E-03
18GO:0005618: cell wall2.76E-03
19GO:0042807: central vacuole2.96E-03
20GO:0000326: protein storage vacuole3.93E-03
21GO:0031977: thylakoid lumen5.22E-03
22GO:0005840: ribosome5.78E-03
23GO:0005884: actin filament6.13E-03
24GO:0009507: chloroplast6.18E-03
25GO:0030095: chloroplast photosystem II8.01E-03
26GO:0009534: chloroplast thylakoid8.56E-03
27GO:0009570: chloroplast stroma8.99E-03
28GO:0009941: chloroplast envelope1.13E-02
29GO:0015935: small ribosomal subunit1.15E-02
30GO:0009535: chloroplast thylakoid membrane2.14E-02
31GO:0010319: stromule2.27E-02
32GO:0005778: peroxisomal membrane2.27E-02
33GO:0016021: integral component of membrane2.34E-02
34GO:0016020: membrane2.57E-02
35GO:0005783: endoplasmic reticulum2.57E-02
36GO:0005789: endoplasmic reticulum membrane3.48E-02
37GO:0005874: microtubule3.50E-02
38GO:0005773: vacuole3.67E-02
39GO:0005819: spindle3.76E-02
40GO:0005802: trans-Golgi network4.57E-02
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Gene type



Gene DE type