co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G32090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
2	GO:0070584: mitochondrion morphogenesis	0.00E+00
3	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
4	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
5	GO:0046677: response to antibiotic	0.00E+00
6	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	2.53E-05
7	GO:0050992: dimethylallyl diphosphate biosynthetic process	6.44E-05
8	GO:0055129: L-proline biosynthetic process	6.44E-05
9	GO:0042548: regulation of photosynthesis, light reaction	6.44E-05
10	GO:0015995: chlorophyll biosynthetic process	2.28E-04
11	GO:2000306: positive regulation of photomorphogenesis	2.30E-04
12	GO:0016123: xanthophyll biosynthetic process	2.95E-04
13	GO:0009643: photosynthetic acclimation	3.65E-04
14	GO:0006561: proline biosynthetic process	3.65E-04
15	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.65E-04
16	GO:0045962: positive regulation of development, heterochronic	3.65E-04
17	GO:0071470: cellular response to osmotic stress	4.36E-04
18	GO:1900056: negative regulation of leaf senescence	5.11E-04
19	GO:0050821: protein stabilization	5.89E-04
20	GO:0071482: cellular response to light stimulus	6.69E-04
21	GO:0007186: G-protein coupled receptor signaling pathway	6.69E-04
22	GO:0010380: regulation of chlorophyll biosynthetic process	8.38E-04
23	GO:0009416: response to light stimulus	8.42E-04
24	GO:0009688: abscisic acid biosynthetic process	9.24E-04
25	GO:0018107: peptidyl-threonine phosphorylation	1.20E-03
26	GO:0009767: photosynthetic electron transport chain	1.20E-03
27	GO:0007623: circadian rhythm	1.30E-03
28	GO:0034976: response to endoplasmic reticulum stress	1.50E-03
29	GO:0055114: oxidation-reduction process	1.56E-03
30	GO:0009768: photosynthesis, light harvesting in photosystem I	1.72E-03
31	GO:0006874: cellular calcium ion homeostasis	1.72E-03
32	GO:0009658: chloroplast organization	1.99E-03
33	GO:0010182: sugar mediated signaling pathway	2.55E-03
34	GO:0044550: secondary metabolite biosynthetic process	2.67E-03
35	GO:0007018: microtubule-based movement	2.68E-03
36	GO:0006814: sodium ion transport	2.68E-03
37	GO:0045454: cell redox homeostasis	2.93E-03
38	GO:0016126: sterol biosynthetic process	3.77E-03
39	GO:0009813: flavonoid biosynthetic process	4.67E-03
40	GO:0006811: ion transport	4.83E-03
41	GO:0007568: aging	4.99E-03
42	GO:0009910: negative regulation of flower development	4.99E-03
43	GO:0006865: amino acid transport	5.15E-03
44	GO:0009637: response to blue light	5.31E-03
45	GO:0034599: cellular response to oxidative stress	5.47E-03
46	GO:0016310: phosphorylation	6.27E-03
47	GO:0010114: response to red light	6.32E-03
48	GO:0051707: response to other organism	6.32E-03
49	GO:0009965: leaf morphogenesis	6.85E-03
50	GO:0006812: cation transport	7.40E-03
51	GO:0042538: hyperosmotic salinity response	7.40E-03
52	GO:0009909: regulation of flower development	8.35E-03
53	GO:0043086: negative regulation of catalytic activity	8.74E-03
54	GO:0009624: response to nematode	9.95E-03
55	GO:0018105: peptidyl-serine phosphorylation	1.02E-02
56	GO:0009845: seed germination	1.23E-02
57	GO:0006970: response to osmotic stress	2.10E-02
58	GO:0007049: cell cycle	2.16E-02
59	GO:0009723: response to ethylene	2.21E-02
60	GO:0048366: leaf development	2.24E-02
61	GO:0080167: response to karrikin	2.32E-02
62	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.38E-02
63	GO:0015979: photosynthesis	2.55E-02
64	GO:0006468: protein phosphorylation	2.68E-02
65	GO:0009737: response to abscisic acid	2.76E-02
66	GO:0009793: embryo development ending in seed dormancy	3.00E-02
67	GO:0009408: response to heat	3.07E-02
68	GO:0009555: pollen development	4.62E-02
69	GO:0035556: intracellular signal transduction	4.80E-02
70	GO:0051301: cell division	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
2	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
5	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
6	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	2.53E-05
7	GO:0004349: glutamate 5-kinase activity	2.53E-05
8	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	2.53E-05
9	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.53E-05
10	GO:0019172: glyoxalase III activity	6.44E-05
11	GO:0004103: choline kinase activity	6.44E-05
12	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.13E-04
13	GO:0000254: C-4 methylsterol oxidase activity	1.69E-04
14	GO:0004930: G-protein coupled receptor activity	2.30E-04
15	GO:0051538: 3 iron, 4 sulfur cluster binding	2.95E-04
16	GO:0004462: lactoylglutathione lyase activity	3.65E-04
17	GO:0004602: glutathione peroxidase activity	4.36E-04
18	GO:0051537: 2 iron, 2 sulfur cluster binding	4.48E-04
19	GO:0071949: FAD binding	7.52E-04
20	GO:0005315: inorganic phosphate transmembrane transporter activity	1.20E-03
21	GO:0004970: ionotropic glutamate receptor activity	1.40E-03
22	GO:0005217: intracellular ligand-gated ion channel activity	1.40E-03
23	GO:0003954: NADH dehydrogenase activity	1.61E-03
24	GO:0005216: ion channel activity	1.72E-03
25	GO:0004176: ATP-dependent peptidase activity	1.83E-03
26	GO:0005506: iron ion binding	1.98E-03
27	GO:0003756: protein disulfide isomerase activity	2.18E-03
28	GO:0008514: organic anion transmembrane transporter activity	2.18E-03
29	GO:0004672: protein kinase activity	3.27E-03
30	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.31E-03
31	GO:0015293: symporter activity	6.85E-03
32	GO:0003777: microtubule motor activity	8.35E-03
33	GO:0015171: amino acid transmembrane transporter activity	8.35E-03
34	GO:0015035: protein disulfide oxidoreductase activity	1.02E-02
35	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.19E-02
36	GO:0015144: carbohydrate transmembrane transporter activity	1.32E-02
37	GO:0005524: ATP binding	1.37E-02
38	GO:0046910: pectinesterase inhibitor activity	1.39E-02
39	GO:0015297: antiporter activity	1.42E-02
40	GO:0005351: sugar:proton symporter activity	1.44E-02
41	GO:0008017: microtubule binding	1.51E-02
42	GO:0004674: protein serine/threonine kinase activity	1.52E-02
43	GO:0008233: peptidase activity	2.30E-02
44	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.79E-02
45	GO:0009055: electron carrier activity	3.23E-02
46	GO:0008289: lipid binding	3.88E-02
47	GO:0016887: ATPase activity	4.19E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	1.19E-06
2	GO:0009941: chloroplast envelope	1.33E-05
3	GO:0009507: chloroplast	1.86E-05
4	GO:0042651: thylakoid membrane	5.21E-05
5	GO:0031304: intrinsic component of mitochondrial inner membrane	6.44E-05
6	GO:0009706: chloroplast inner membrane	7.77E-04
7	GO:0009570: chloroplast stroma	1.17E-03
8	GO:0005871: kinesin complex	2.30E-03
9	GO:0009522: photosystem I	2.68E-03
10	GO:0005777: peroxisome	7.31E-03
11	GO:0009579: thylakoid	7.61E-03
12	GO:0009534: chloroplast thylakoid	7.69E-03
13	GO:0010287: plastoglobule	1.12E-02
14	GO:0016021: integral component of membrane	1.35E-02
15	GO:0005874: microtubule	2.27E-02
16	GO:0031969: chloroplast membrane	2.32E-02
17	GO:0005783: endoplasmic reticulum	2.36E-02