co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071433: cell wall repair	0.00E+00
2	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
3	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
4	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
5	GO:0045792: negative regulation of cell size	0.00E+00
6	GO:0042742: defense response to bacterium	3.83E-09
7	GO:0010200: response to chitin	4.83E-07
8	GO:0006468: protein phosphorylation	2.58E-06
9	GO:0048281: inflorescence morphogenesis	8.14E-06
10	GO:0015696: ammonium transport	1.87E-05
11	GO:0001676: long-chain fatty acid metabolic process	1.87E-05
12	GO:0060548: negative regulation of cell death	3.41E-05
13	GO:0072488: ammonium transmembrane transport	3.41E-05
14	GO:0006564: L-serine biosynthetic process	5.47E-05
15	GO:0031348: negative regulation of defense response	8.56E-05
16	GO:0006886: intracellular protein transport	9.62E-05
17	GO:0007166: cell surface receptor signaling pathway	1.40E-04
18	GO:0006979: response to oxidative stress	1.40E-04
19	GO:0070370: cellular heat acclimation	1.47E-04
20	GO:0009617: response to bacterium	1.53E-04
21	GO:0080136: priming of cellular response to stress	2.18E-04
22	GO:0060862: negative regulation of floral organ abscission	2.18E-04
23	GO:0006805: xenobiotic metabolic process	2.18E-04
24	GO:0051245: negative regulation of cellular defense response	2.18E-04
25	GO:0009609: response to symbiotic bacterium	2.18E-04
26	GO:0010120: camalexin biosynthetic process	2.33E-04
27	GO:0009626: plant-type hypersensitive response	2.53E-04
28	GO:0016192: vesicle-mediated transport	4.20E-04
29	GO:0006952: defense response	4.78E-04
30	GO:0031349: positive regulation of defense response	4.86E-04
31	GO:0051258: protein polymerization	4.86E-04
32	GO:0010541: acropetal auxin transport	4.86E-04
33	GO:0002221: pattern recognition receptor signaling pathway	4.86E-04
34	GO:0015914: phospholipid transport	4.86E-04
35	GO:2000072: regulation of defense response to fungus, incompatible interaction	4.86E-04
36	GO:0080181: lateral root branching	4.86E-04
37	GO:0034605: cellular response to heat	6.66E-04
38	GO:0050832: defense response to fungus	7.07E-04
39	GO:0070588: calcium ion transmembrane transport	7.45E-04
40	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	7.90E-04
41	GO:0055074: calcium ion homeostasis	7.90E-04
42	GO:1900140: regulation of seedling development	7.90E-04
43	GO:0072661: protein targeting to plasma membrane	7.90E-04
44	GO:0006517: protein deglycosylation	7.90E-04
45	GO:0015695: organic cation transport	7.90E-04
46	GO:0015031: protein transport	9.69E-04
47	GO:0009636: response to toxic substance	1.05E-03
48	GO:0006612: protein targeting to membrane	1.13E-03
49	GO:0010148: transpiration	1.13E-03
50	GO:0048194: Golgi vesicle budding	1.13E-03
51	GO:0043207: response to external biotic stimulus	1.13E-03
52	GO:0009625: response to insect	1.31E-03
53	GO:0010508: positive regulation of autophagy	1.50E-03
54	GO:2000038: regulation of stomatal complex development	1.50E-03
55	GO:0010188: response to microbial phytotoxin	1.50E-03
56	GO:0080142: regulation of salicylic acid biosynthetic process	1.50E-03
57	GO:0010363: regulation of plant-type hypersensitive response	1.50E-03
58	GO:0006970: response to osmotic stress	1.56E-03
59	GO:0010197: polar nucleus fusion	1.78E-03
60	GO:0009620: response to fungus	1.83E-03
61	GO:0046283: anthocyanin-containing compound metabolic process	1.91E-03
62	GO:0031365: N-terminal protein amino acid modification	1.91E-03
63	GO:0061025: membrane fusion	1.92E-03
64	GO:0080167: response to karrikin	1.93E-03
65	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.04E-03
66	GO:0006623: protein targeting to vacuole	2.06E-03
67	GO:0000302: response to reactive oxygen species	2.20E-03
68	GO:0010193: response to ozone	2.20E-03
69	GO:0009228: thiamine biosynthetic process	2.35E-03
70	GO:0009759: indole glucosinolate biosynthetic process	2.35E-03
71	GO:0010942: positive regulation of cell death	2.35E-03
72	GO:0006751: glutathione catabolic process	2.35E-03
73	GO:0009612: response to mechanical stimulus	2.83E-03
74	GO:0006694: steroid biosynthetic process	2.83E-03
75	GO:2000037: regulation of stomatal complex patterning	2.83E-03
76	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.83E-03
77	GO:0000911: cytokinesis by cell plate formation	2.83E-03
78	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.33E-03
79	GO:0009610: response to symbiotic fungus	3.33E-03
80	GO:0043090: amino acid import	3.33E-03
81	GO:0071446: cellular response to salicylic acid stimulus	3.33E-03
82	GO:0009751: response to salicylic acid	3.43E-03
83	GO:0009408: response to heat	3.50E-03
84	GO:0009409: response to cold	3.75E-03
85	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.86E-03
86	GO:0009819: drought recovery	3.86E-03
87	GO:0006491: N-glycan processing	3.86E-03
88	GO:0010150: leaf senescence	4.10E-03
89	GO:0009817: defense response to fungus, incompatible interaction	4.12E-03
90	GO:0008219: cell death	4.12E-03
91	GO:0010204: defense response signaling pathway, resistance gene-independent	4.42E-03
92	GO:0043562: cellular response to nitrogen levels	4.42E-03
93	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.42E-03
94	GO:0009699: phenylpropanoid biosynthetic process	4.42E-03
95	GO:0006002: fructose 6-phosphate metabolic process	4.42E-03
96	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.42E-03
97	GO:0009407: toxin catabolic process	4.55E-03
98	GO:0010119: regulation of stomatal movement	4.76E-03
99	GO:0006470: protein dephosphorylation	4.86E-03
100	GO:0046686: response to cadmium ion	4.93E-03
101	GO:0009867: jasmonic acid mediated signaling pathway	5.22E-03
102	GO:0045087: innate immune response	5.22E-03
103	GO:0048268: clathrin coat assembly	5.62E-03
104	GO:0006887: exocytosis	6.20E-03
105	GO:0006631: fatty acid metabolic process	6.20E-03
106	GO:0006032: chitin catabolic process	6.25E-03
107	GO:0043069: negative regulation of programmed cell death	6.25E-03
108	GO:0051707: response to other organism	6.73E-03
109	GO:0009682: induced systemic resistance	6.91E-03
110	GO:0052544: defense response by callose deposition in cell wall	6.91E-03
111	GO:0015706: nitrate transport	7.60E-03
112	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.60E-03
113	GO:0012501: programmed cell death	7.60E-03
114	GO:0010102: lateral root morphogenesis	8.30E-03
115	GO:0010229: inflorescence development	8.30E-03
116	GO:0009723: response to ethylene	8.60E-03
117	GO:0007034: vacuolar transport	9.03E-03
118	GO:0009737: response to abscisic acid	9.09E-03
119	GO:0010167: response to nitrate	9.79E-03
120	GO:0010053: root epidermal cell differentiation	9.79E-03
121	GO:0009969: xyloglucan biosynthetic process	9.79E-03
122	GO:0042343: indole glucosinolate metabolic process	9.79E-03
123	GO:0046777: protein autophosphorylation	1.02E-02
124	GO:0034976: response to endoplasmic reticulum stress	1.06E-02
125	GO:0000027: ribosomal large subunit assembly	1.14E-02
126	GO:0009863: salicylic acid mediated signaling pathway	1.14E-02
127	GO:0010187: negative regulation of seed germination	1.14E-02
128	GO:2000377: regulation of reactive oxygen species metabolic process	1.14E-02
129	GO:0045454: cell redox homeostasis	1.18E-02
130	GO:0006457: protein folding	1.24E-02
131	GO:0048278: vesicle docking	1.30E-02
132	GO:0016998: cell wall macromolecule catabolic process	1.30E-02
133	GO:0098542: defense response to other organism	1.30E-02
134	GO:0009624: response to nematode	1.30E-02
135	GO:0009814: defense response, incompatible interaction	1.39E-02
136	GO:0030433: ubiquitin-dependent ERAD pathway	1.39E-02
137	GO:0010227: floral organ abscission	1.48E-02
138	GO:0006284: base-excision repair	1.57E-02
139	GO:0042391: regulation of membrane potential	1.75E-02
140	GO:0042631: cellular response to water deprivation	1.75E-02
141	GO:0009845: seed germination	1.76E-02
142	GO:0008360: regulation of cell shape	1.85E-02
143	GO:0006662: glycerol ether metabolic process	1.85E-02
144	GO:0009646: response to absence of light	1.95E-02
145	GO:0010183: pollen tube guidance	2.05E-02
146	GO:0006891: intra-Golgi vesicle-mediated transport	2.15E-02
147	GO:0009651: response to salt stress	2.17E-02
148	GO:0030163: protein catabolic process	2.36E-02
149	GO:0006904: vesicle docking involved in exocytosis	2.57E-02
150	GO:0010468: regulation of gene expression	2.68E-02
151	GO:0009615: response to virus	2.79E-02
152	GO:0009816: defense response to bacterium, incompatible interaction	2.91E-02
153	GO:0009607: response to biotic stimulus	2.91E-02
154	GO:0006906: vesicle fusion	3.02E-02
155	GO:0009627: systemic acquired resistance	3.02E-02
156	GO:0042128: nitrate assimilation	3.02E-02
157	GO:0048481: plant ovule development	3.37E-02
158	GO:0009832: plant-type cell wall biogenesis	3.49E-02
159	GO:0010311: lateral root formation	3.49E-02
160	GO:0006499: N-terminal protein myristoylation	3.62E-02
161	GO:0048527: lateral root development	3.74E-02
162	GO:0006865: amino acid transport	3.86E-02
163	GO:0034599: cellular response to oxidative stress	4.12E-02
164	GO:0006897: endocytosis	4.51E-02
165	GO:0044550: secondary metabolite biosynthetic process	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
2	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
3	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
4	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
5	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
6	GO:0005524: ATP binding	1.18E-06
7	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.56E-06
8	GO:0016301: kinase activity	4.11E-06
9	GO:0004674: protein serine/threonine kinase activity	5.00E-06
10	GO:0008519: ammonium transmembrane transporter activity	8.04E-05
11	GO:0102391: decanoate--CoA ligase activity	1.11E-04
12	GO:0008320: protein transmembrane transporter activity	1.47E-04
13	GO:0004467: long-chain fatty acid-CoA ligase activity	1.47E-04
14	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.18E-04
15	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.18E-04
16	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.18E-04
17	GO:2001147: camalexin binding	2.18E-04
18	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.18E-04
19	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.18E-04
20	GO:2001227: quercitrin binding	2.18E-04
21	GO:0015085: calcium ion transmembrane transporter activity	2.18E-04
22	GO:0004672: protein kinase activity	3.85E-04
23	GO:0019172: glyoxalase III activity	4.86E-04
24	GO:0004338: glucan exo-1,3-beta-glucosidase activity	4.86E-04
25	GO:0004617: phosphoglycerate dehydrogenase activity	4.86E-04
26	GO:0038199: ethylene receptor activity	4.86E-04
27	GO:0050897: cobalt ion binding	5.89E-04
28	GO:0005388: calcium-transporting ATPase activity	5.92E-04
29	GO:0004148: dihydrolipoyl dehydrogenase activity	7.90E-04
30	GO:0004557: alpha-galactosidase activity	7.90E-04
31	GO:0003840: gamma-glutamyltransferase activity	7.90E-04
32	GO:0036374: glutathione hydrolase activity	7.90E-04
33	GO:0052692: raffinose alpha-galactosidase activity	7.90E-04
34	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	7.90E-04
35	GO:0033612: receptor serine/threonine kinase binding	1.10E-03
36	GO:0051740: ethylene binding	1.13E-03
37	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.13E-03
38	GO:0005516: calmodulin binding	1.14E-03
39	GO:0043495: protein anchor	1.50E-03
40	GO:0030276: clathrin binding	1.78E-03
41	GO:0008725: DNA-3-methyladenine glycosylase activity	1.91E-03
42	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.35E-03
43	GO:0030976: thiamine pyrophosphate binding	2.35E-03
44	GO:0004012: phospholipid-translocating ATPase activity	2.83E-03
45	GO:0004602: glutathione peroxidase activity	2.83E-03
46	GO:0004656: procollagen-proline 4-dioxygenase activity	2.83E-03
47	GO:0003872: 6-phosphofructokinase activity	3.33E-03
48	GO:0043295: glutathione binding	3.33E-03
49	GO:0004143: diacylglycerol kinase activity	3.33E-03
50	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.33E-03
51	GO:0008235: metalloexopeptidase activity	3.33E-03
52	GO:0030247: polysaccharide binding	3.72E-03
53	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.75E-03
54	GO:0003843: 1,3-beta-D-glucan synthase activity	4.42E-03
55	GO:0008417: fucosyltransferase activity	5.00E-03
56	GO:0015112: nitrate transmembrane transporter activity	5.62E-03
57	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.62E-03
58	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.70E-03
59	GO:0004713: protein tyrosine kinase activity	6.25E-03
60	GO:0004673: protein histidine kinase activity	6.25E-03
61	GO:0004568: chitinase activity	6.25E-03
62	GO:0005545: 1-phosphatidylinositol binding	6.25E-03
63	GO:0005509: calcium ion binding	6.27E-03
64	GO:0004364: glutathione transferase activity	6.46E-03
65	GO:0005484: SNAP receptor activity	6.73E-03
66	GO:0001054: RNA polymerase I activity	6.91E-03
67	GO:0004177: aminopeptidase activity	6.91E-03
68	GO:0046872: metal ion binding	6.96E-03
69	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.30E-03
70	GO:0031072: heat shock protein binding	8.30E-03
71	GO:0000155: phosphorelay sensor kinase activity	8.30E-03
72	GO:0000175: 3'-5'-exoribonuclease activity	8.30E-03
73	GO:0004535: poly(A)-specific ribonuclease activity	9.03E-03
74	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.03E-03
75	GO:0003712: transcription cofactor activity	9.79E-03
76	GO:0004190: aspartic-type endopeptidase activity	9.79E-03
77	GO:0030552: cAMP binding	9.79E-03
78	GO:0030553: cGMP binding	9.79E-03
79	GO:0031418: L-ascorbic acid binding	1.14E-02
80	GO:0005216: ion channel activity	1.22E-02
81	GO:0004707: MAP kinase activity	1.30E-02
82	GO:0051082: unfolded protein binding	1.30E-02
83	GO:0008408: 3'-5' exonuclease activity	1.30E-02
84	GO:0004540: ribonuclease activity	1.30E-02
85	GO:0004722: protein serine/threonine phosphatase activity	1.33E-02
86	GO:0008810: cellulase activity	1.48E-02
87	GO:0003756: protein disulfide isomerase activity	1.57E-02
88	GO:0047134: protein-disulfide reductase activity	1.66E-02
89	GO:0005249: voltage-gated potassium channel activity	1.75E-02
90	GO:0030551: cyclic nucleotide binding	1.75E-02
91	GO:0004527: exonuclease activity	1.85E-02
92	GO:0008565: protein transporter activity	1.95E-02
93	GO:0004791: thioredoxin-disulfide reductase activity	1.95E-02
94	GO:0004872: receptor activity	2.05E-02
95	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.36E-02
96	GO:0005506: iron ion binding	2.36E-02
97	GO:0016597: amino acid binding	2.68E-02
98	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.14E-02
99	GO:0043531: ADP binding	3.80E-02
100	GO:0003746: translation elongation factor activity	3.99E-02
101	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.99E-02
102	GO:0000149: SNARE binding	4.25E-02
103	GO:0042393: histone binding	4.38E-02
104	GO:0019825: oxygen binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.76E-14
2	GO:0016021: integral component of membrane	1.61E-05
3	GO:0005783: endoplasmic reticulum	3.02E-05
4	GO:0009504: cell plate	1.91E-04
5	GO:0030014: CCR4-NOT complex	2.18E-04
6	GO:0005887: integral component of plasma membrane	2.91E-04
7	GO:0030665: clathrin-coated vesicle membrane	3.36E-04
8	GO:0005788: endoplasmic reticulum lumen	3.73E-04
9	GO:0017119: Golgi transport complex	3.94E-04
10	GO:0005789: endoplasmic reticulum membrane	4.25E-04
11	GO:0005901: caveola	4.86E-04
12	GO:0030134: ER to Golgi transport vesicle	4.86E-04
13	GO:0030139: endocytic vesicle	7.90E-04
14	GO:0046861: glyoxysomal membrane	7.90E-04
15	GO:0031902: late endosome membrane	8.21E-04
16	GO:0009506: plasmodesma	1.10E-03
17	GO:0070062: extracellular exosome	1.13E-03
18	GO:0009898: cytoplasmic side of plasma membrane	1.50E-03
19	GO:0000164: protein phosphatase type 1 complex	1.91E-03
20	GO:0005945: 6-phosphofructokinase complex	1.91E-03
21	GO:0032580: Golgi cisterna membrane	2.66E-03
22	GO:0005801: cis-Golgi network	2.83E-03
23	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.33E-03
24	GO:0030131: clathrin adaptor complex	3.86E-03
25	GO:0000148: 1,3-beta-D-glucan synthase complex	4.42E-03
26	GO:0009514: glyoxysome	4.42E-03
27	GO:0005736: DNA-directed RNA polymerase I complex	5.00E-03
28	GO:0005773: vacuole	8.29E-03
29	GO:0005795: Golgi stack	9.79E-03
30	GO:0005905: clathrin-coated pit	1.30E-02
31	GO:0030136: clathrin-coated vesicle	1.66E-02
32	GO:0016592: mediator complex	2.25E-02
33	GO:0000145: exocyst	2.25E-02
34	GO:0005774: vacuolar membrane	2.30E-02
35	GO:0030529: intracellular ribonucleoprotein complex	2.79E-02
36	GO:0005794: Golgi apparatus	2.99E-02
37	GO:0005829: cytosol	3.33E-02
38	GO:0000151: ubiquitin ligase complex	3.37E-02
39	GO:0019005: SCF ubiquitin ligase complex	3.37E-02
40	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.80E-02
41	GO:0031201: SNARE complex	4.51E-02