GO Enrichment Analysis of Co-expressed Genes with
AT2G30860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 2 | GO:0002376: immune system process | 0.00E+00 |
| 3 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 4 | GO:0010499: proteasomal ubiquitin-independent protein catabolic process | 0.00E+00 |
| 5 | GO:0001881: receptor recycling | 0.00E+00 |
| 6 | GO:0072722: response to amitrole | 0.00E+00 |
| 7 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 8 | GO:0048227: plasma membrane to endosome transport | 0.00E+00 |
| 9 | GO:0045454: cell redox homeostasis | 9.62E-10 |
| 10 | GO:0046685: response to arsenic-containing substance | 4.68E-06 |
| 11 | GO:0034976: response to endoplasmic reticulum stress | 3.12E-05 |
| 12 | GO:0080120: CAAX-box protein maturation | 1.82E-04 |
| 13 | GO:0071586: CAAX-box protein processing | 1.82E-04 |
| 14 | GO:0006805: xenobiotic metabolic process | 1.82E-04 |
| 15 | GO:0006422: aspartyl-tRNA aminoacylation | 1.82E-04 |
| 16 | GO:0042742: defense response to bacterium | 3.14E-04 |
| 17 | GO:0009790: embryo development | 3.77E-04 |
| 18 | GO:0015706: nitrate transport | 4.06E-04 |
| 19 | GO:0019752: carboxylic acid metabolic process | 4.10E-04 |
| 20 | GO:1902000: homogentisate catabolic process | 4.10E-04 |
| 21 | GO:0008535: respiratory chain complex IV assembly | 4.10E-04 |
| 22 | GO:0031648: protein destabilization | 4.10E-04 |
| 23 | GO:0010150: leaf senescence | 4.90E-04 |
| 24 | GO:0007034: vacuolar transport | 5.21E-04 |
| 25 | GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening | 6.69E-04 |
| 26 | GO:0080055: low-affinity nitrate transport | 6.69E-04 |
| 27 | GO:0010288: response to lead ion | 6.69E-04 |
| 28 | GO:0010272: response to silver ion | 6.69E-04 |
| 29 | GO:0045039: protein import into mitochondrial inner membrane | 6.69E-04 |
| 30 | GO:0009072: aromatic amino acid family metabolic process | 6.69E-04 |
| 31 | GO:0008333: endosome to lysosome transport | 6.69E-04 |
| 32 | GO:0001676: long-chain fatty acid metabolic process | 9.55E-04 |
| 33 | GO:0048194: Golgi vesicle budding | 9.55E-04 |
| 34 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 9.55E-04 |
| 35 | GO:0072583: clathrin-dependent endocytosis | 9.55E-04 |
| 36 | GO:0010188: response to microbial phytotoxin | 1.27E-03 |
| 37 | GO:0033320: UDP-D-xylose biosynthetic process | 1.27E-03 |
| 38 | GO:0051205: protein insertion into membrane | 1.27E-03 |
| 39 | GO:0006662: glycerol ether metabolic process | 1.39E-03 |
| 40 | GO:0006623: protein targeting to vacuole | 1.60E-03 |
| 41 | GO:0006564: L-serine biosynthetic process | 1.61E-03 |
| 42 | GO:0006461: protein complex assembly | 1.61E-03 |
| 43 | GO:0000302: response to reactive oxygen species | 1.71E-03 |
| 44 | GO:0007264: small GTPase mediated signal transduction | 1.82E-03 |
| 45 | GO:0010405: arabinogalactan protein metabolic process | 1.98E-03 |
| 46 | GO:0006751: glutathione catabolic process | 1.98E-03 |
| 47 | GO:0042732: D-xylose metabolic process | 1.98E-03 |
| 48 | GO:0015031: protein transport | 1.98E-03 |
| 49 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.98E-03 |
| 50 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.38E-03 |
| 51 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.38E-03 |
| 52 | GO:0009615: response to virus | 2.46E-03 |
| 53 | GO:0042128: nitrate assimilation | 2.74E-03 |
| 54 | GO:0070370: cellular heat acclimation | 2.80E-03 |
| 55 | GO:0050790: regulation of catalytic activity | 2.80E-03 |
| 56 | GO:0043090: amino acid import | 2.80E-03 |
| 57 | GO:1900056: negative regulation of leaf senescence | 2.80E-03 |
| 58 | GO:0000028: ribosomal small subunit assembly | 3.24E-03 |
| 59 | GO:0009819: drought recovery | 3.24E-03 |
| 60 | GO:0030968: endoplasmic reticulum unfolded protein response | 3.71E-03 |
| 61 | GO:0006002: fructose 6-phosphate metabolic process | 3.71E-03 |
| 62 | GO:0009821: alkaloid biosynthetic process | 4.20E-03 |
| 63 | GO:0034599: cellular response to oxidative stress | 4.23E-03 |
| 64 | GO:0010205: photoinhibition | 4.71E-03 |
| 65 | GO:0043067: regulation of programmed cell death | 4.71E-03 |
| 66 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.71E-03 |
| 67 | GO:0000103: sulfate assimilation | 5.24E-03 |
| 68 | GO:0006032: chitin catabolic process | 5.24E-03 |
| 69 | GO:0072593: reactive oxygen species metabolic process | 5.79E-03 |
| 70 | GO:0000272: polysaccharide catabolic process | 5.79E-03 |
| 71 | GO:0010102: lateral root morphogenesis | 6.94E-03 |
| 72 | GO:0034605: cellular response to heat | 7.55E-03 |
| 73 | GO:0002237: response to molecule of bacterial origin | 7.55E-03 |
| 74 | GO:0010053: root epidermal cell differentiation | 8.18E-03 |
| 75 | GO:0009225: nucleotide-sugar metabolic process | 8.18E-03 |
| 76 | GO:0010167: response to nitrate | 8.18E-03 |
| 77 | GO:0006457: protein folding | 8.37E-03 |
| 78 | GO:2000377: regulation of reactive oxygen species metabolic process | 9.48E-03 |
| 79 | GO:0000027: ribosomal large subunit assembly | 9.48E-03 |
| 80 | GO:0030150: protein import into mitochondrial matrix | 9.48E-03 |
| 81 | GO:0009553: embryo sac development | 9.71E-03 |
| 82 | GO:0046686: response to cadmium ion | 9.94E-03 |
| 83 | GO:0006874: cellular calcium ion homeostasis | 1.02E-02 |
| 84 | GO:0016998: cell wall macromolecule catabolic process | 1.09E-02 |
| 85 | GO:0007005: mitochondrion organization | 1.16E-02 |
| 86 | GO:0031348: negative regulation of defense response | 1.16E-02 |
| 87 | GO:0009625: response to insect | 1.23E-02 |
| 88 | GO:0010227: floral organ abscission | 1.23E-02 |
| 89 | GO:0006012: galactose metabolic process | 1.23E-02 |
| 90 | GO:0010091: trichome branching | 1.31E-02 |
| 91 | GO:0009651: response to salt stress | 1.32E-02 |
| 92 | GO:0042147: retrograde transport, endosome to Golgi | 1.38E-02 |
| 93 | GO:0010501: RNA secondary structure unwinding | 1.46E-02 |
| 94 | GO:0042631: cellular response to water deprivation | 1.46E-02 |
| 95 | GO:0042391: regulation of membrane potential | 1.46E-02 |
| 96 | GO:0006520: cellular amino acid metabolic process | 1.54E-02 |
| 97 | GO:0009646: response to absence of light | 1.62E-02 |
| 98 | GO:0006979: response to oxidative stress | 1.66E-02 |
| 99 | GO:0010193: response to ozone | 1.79E-02 |
| 100 | GO:0030163: protein catabolic process | 1.96E-02 |
| 101 | GO:0009735: response to cytokinin | 2.05E-02 |
| 102 | GO:0009416: response to light stimulus | 2.30E-02 |
| 103 | GO:0001666: response to hypoxia | 2.32E-02 |
| 104 | GO:0009607: response to biotic stimulus | 2.42E-02 |
| 105 | GO:0009627: systemic acquired resistance | 2.51E-02 |
| 106 | GO:0006468: protein phosphorylation | 2.66E-02 |
| 107 | GO:0008219: cell death | 2.81E-02 |
| 108 | GO:0009860: pollen tube growth | 2.89E-02 |
| 109 | GO:0055114: oxidation-reduction process | 2.97E-02 |
| 110 | GO:0009407: toxin catabolic process | 3.01E-02 |
| 111 | GO:0006499: N-terminal protein myristoylation | 3.01E-02 |
| 112 | GO:0009723: response to ethylene | 3.11E-02 |
| 113 | GO:0010043: response to zinc ion | 3.11E-02 |
| 114 | GO:0006865: amino acid transport | 3.22E-02 |
| 115 | GO:0046777: protein autophosphorylation | 3.56E-02 |
| 116 | GO:0006631: fatty acid metabolic process | 3.76E-02 |
| 117 | GO:0006886: intracellular protein transport | 4.11E-02 |
| 118 | GO:0009644: response to high light intensity | 4.21E-02 |
| 119 | GO:0009636: response to toxic substance | 4.32E-02 |
| 120 | GO:0031347: regulation of defense response | 4.56E-02 |
| 121 | GO:0009846: pollen germination | 4.68E-02 |
| 122 | GO:0009751: response to salicylic acid | 4.82E-02 |
| 123 | GO:0006364: rRNA processing | 4.92E-02 |
| 124 | GO:0006486: protein glycosylation | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016504: peptidase activator activity | 0.00E+00 |
| 2 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 3 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 4 | GO:0070577: lysine-acetylated histone binding | 0.00E+00 |
| 5 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 6 | GO:0015035: protein disulfide oxidoreductase activity | 1.84E-05 |
| 7 | GO:0003756: protein disulfide isomerase activity | 7.58E-05 |
| 8 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 1.82E-04 |
| 9 | GO:0032050: clathrin heavy chain binding | 1.82E-04 |
| 10 | GO:0004815: aspartate-tRNA ligase activity | 1.82E-04 |
| 11 | GO:0008794: arsenate reductase (glutaredoxin) activity | 3.54E-04 |
| 12 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 4.10E-04 |
| 13 | GO:0032791: lead ion binding | 4.10E-04 |
| 14 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.10E-04 |
| 15 | GO:0003840: gamma-glutamyltransferase activity | 6.69E-04 |
| 16 | GO:0036374: glutathione hydrolase activity | 6.69E-04 |
| 17 | GO:0052692: raffinose alpha-galactosidase activity | 6.69E-04 |
| 18 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 6.69E-04 |
| 19 | GO:0005093: Rab GDP-dissociation inhibitor activity | 6.69E-04 |
| 20 | GO:0008430: selenium binding | 6.69E-04 |
| 21 | GO:0004557: alpha-galactosidase activity | 6.69E-04 |
| 22 | GO:0031176: endo-1,4-beta-xylanase activity | 9.55E-04 |
| 23 | GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity | 9.55E-04 |
| 24 | GO:0047134: protein-disulfide reductase activity | 1.20E-03 |
| 25 | GO:0000062: fatty-acyl-CoA binding | 1.27E-03 |
| 26 | GO:0004301: epoxide hydrolase activity | 1.27E-03 |
| 27 | GO:0070628: proteasome binding | 1.27E-03 |
| 28 | GO:0004791: thioredoxin-disulfide reductase activity | 1.49E-03 |
| 29 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.94E-03 |
| 30 | GO:0030976: thiamine pyrophosphate binding | 1.98E-03 |
| 31 | GO:0048040: UDP-glucuronate decarboxylase activity | 1.98E-03 |
| 32 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.98E-03 |
| 33 | GO:0031593: polyubiquitin binding | 1.98E-03 |
| 34 | GO:0003978: UDP-glucose 4-epimerase activity | 2.38E-03 |
| 35 | GO:0070403: NAD+ binding | 2.38E-03 |
| 36 | GO:0102391: decanoate--CoA ligase activity | 2.38E-03 |
| 37 | GO:0004012: phospholipid-translocating ATPase activity | 2.38E-03 |
| 38 | GO:0005516: calmodulin binding | 2.73E-03 |
| 39 | GO:0030515: snoRNA binding | 2.80E-03 |
| 40 | GO:0008320: protein transmembrane transporter activity | 2.80E-03 |
| 41 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.80E-03 |
| 42 | GO:0016831: carboxy-lyase activity | 2.80E-03 |
| 43 | GO:0003872: 6-phosphofructokinase activity | 2.80E-03 |
| 44 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 3.24E-03 |
| 45 | GO:0003678: DNA helicase activity | 4.20E-03 |
| 46 | GO:0016844: strictosidine synthase activity | 4.71E-03 |
| 47 | GO:0015112: nitrate transmembrane transporter activity | 4.71E-03 |
| 48 | GO:0004364: glutathione transferase activity | 5.00E-03 |
| 49 | GO:0004568: chitinase activity | 5.24E-03 |
| 50 | GO:0001054: RNA polymerase I activity | 5.79E-03 |
| 51 | GO:0015293: symporter activity | 5.85E-03 |
| 52 | GO:0008378: galactosyltransferase activity | 6.35E-03 |
| 53 | GO:0000175: 3'-5'-exoribonuclease activity | 6.94E-03 |
| 54 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 6.94E-03 |
| 55 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 7.02E-03 |
| 56 | GO:0004535: poly(A)-specific ribonuclease activity | 7.55E-03 |
| 57 | GO:0004175: endopeptidase activity | 7.55E-03 |
| 58 | GO:0005217: intracellular ligand-gated ion channel activity | 8.18E-03 |
| 59 | GO:0008061: chitin binding | 8.18E-03 |
| 60 | GO:0003712: transcription cofactor activity | 8.18E-03 |
| 61 | GO:0004970: ionotropic glutamate receptor activity | 8.18E-03 |
| 62 | GO:0004190: aspartic-type endopeptidase activity | 8.18E-03 |
| 63 | GO:0030552: cAMP binding | 8.18E-03 |
| 64 | GO:0030553: cGMP binding | 8.18E-03 |
| 65 | GO:0003954: NADH dehydrogenase activity | 9.48E-03 |
| 66 | GO:0005528: FK506 binding | 9.48E-03 |
| 67 | GO:0005216: ion channel activity | 1.02E-02 |
| 68 | GO:0004298: threonine-type endopeptidase activity | 1.09E-02 |
| 69 | GO:0008408: 3'-5' exonuclease activity | 1.09E-02 |
| 70 | GO:0004540: ribonuclease activity | 1.09E-02 |
| 71 | GO:0009055: electron carrier activity | 1.22E-02 |
| 72 | GO:0005524: ATP binding | 1.32E-02 |
| 73 | GO:0005249: voltage-gated potassium channel activity | 1.46E-02 |
| 74 | GO:0030551: cyclic nucleotide binding | 1.46E-02 |
| 75 | GO:0005509: calcium ion binding | 1.46E-02 |
| 76 | GO:0016787: hydrolase activity | 1.72E-02 |
| 77 | GO:0004197: cysteine-type endopeptidase activity | 1.87E-02 |
| 78 | GO:0016597: amino acid binding | 2.23E-02 |
| 79 | GO:0000166: nucleotide binding | 2.30E-02 |
| 80 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.51E-02 |
| 81 | GO:0004721: phosphoprotein phosphatase activity | 2.61E-02 |
| 82 | GO:0004004: ATP-dependent RNA helicase activity | 2.61E-02 |
| 83 | GO:0004683: calmodulin-dependent protein kinase activity | 2.61E-02 |
| 84 | GO:0004601: peroxidase activity | 2.69E-02 |
| 85 | GO:0004674: protein serine/threonine kinase activity | 2.74E-02 |
| 86 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.81E-02 |
| 87 | GO:0005096: GTPase activator activity | 2.91E-02 |
| 88 | GO:0004672: protein kinase activity | 2.91E-02 |
| 89 | GO:0043531: ADP binding | 2.95E-02 |
| 90 | GO:0004222: metalloendopeptidase activity | 3.01E-02 |
| 91 | GO:0050897: cobalt ion binding | 3.11E-02 |
| 92 | GO:0003746: translation elongation factor activity | 3.32E-02 |
| 93 | GO:0003697: single-stranded DNA binding | 3.32E-02 |
| 94 | GO:0005515: protein binding | 3.59E-02 |
| 95 | GO:0005525: GTP binding | 4.26E-02 |
| 96 | GO:0005198: structural molecule activity | 4.32E-02 |
| 97 | GO:0004722: protein serine/threonine phosphatase activity | 4.36E-02 |
| 98 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.44E-02 |
| 99 | GO:0051287: NAD binding | 4.56E-02 |
| 100 | GO:0003924: GTPase activity | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0005783: endoplasmic reticulum | 1.47E-06 |
| 4 | GO:0005829: cytosol | 6.56E-05 |
| 5 | GO:0030014: CCR4-NOT complex | 1.82E-04 |
| 6 | GO:0034388: Pwp2p-containing subcomplex of 90S preribosome | 1.82E-04 |
| 7 | GO:0005788: endoplasmic reticulum lumen | 2.66E-04 |
| 8 | GO:0031304: intrinsic component of mitochondrial inner membrane | 4.10E-04 |
| 9 | GO:0030134: ER to Golgi transport vesicle | 4.10E-04 |
| 10 | GO:0030139: endocytic vesicle | 6.69E-04 |
| 11 | GO:0005886: plasma membrane | 6.99E-04 |
| 12 | GO:0005839: proteasome core complex | 8.65E-04 |
| 13 | GO:0005773: vacuole | 1.61E-03 |
| 14 | GO:0005945: 6-phosphofructokinase complex | 1.61E-03 |
| 15 | GO:0016021: integral component of membrane | 1.93E-03 |
| 16 | GO:0005771: multivesicular body | 1.98E-03 |
| 17 | GO:0030904: retromer complex | 1.98E-03 |
| 18 | GO:0005778: peroxisomal membrane | 2.19E-03 |
| 19 | GO:0016272: prefoldin complex | 2.38E-03 |
| 20 | GO:0005801: cis-Golgi network | 2.38E-03 |
| 21 | GO:0005789: endoplasmic reticulum membrane | 2.85E-03 |
| 22 | GO:0005794: Golgi apparatus | 2.95E-03 |
| 23 | GO:0000326: protein storage vacuole | 3.71E-03 |
| 24 | GO:0009514: glyoxysome | 3.71E-03 |
| 25 | GO:0019773: proteasome core complex, alpha-subunit complex | 3.71E-03 |
| 26 | GO:0005736: DNA-directed RNA polymerase I complex | 4.20E-03 |
| 27 | GO:0031902: late endosome membrane | 4.80E-03 |
| 28 | GO:0005774: vacuolar membrane | 4.88E-03 |
| 29 | GO:0017119: Golgi transport complex | 5.24E-03 |
| 30 | GO:0030125: clathrin vesicle coat | 5.24E-03 |
| 31 | GO:0048046: apoplast | 5.42E-03 |
| 32 | GO:0031307: integral component of mitochondrial outer membrane | 6.35E-03 |
| 33 | GO:0032040: small-subunit processome | 6.35E-03 |
| 34 | GO:0005764: lysosome | 7.55E-03 |
| 35 | GO:0030176: integral component of endoplasmic reticulum membrane | 8.18E-03 |
| 36 | GO:0043234: protein complex | 8.82E-03 |
| 37 | GO:0005743: mitochondrial inner membrane | 1.01E-02 |
| 38 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.31E-02 |
| 39 | GO:0009505: plant-type cell wall | 2.30E-02 |
| 40 | GO:0030529: intracellular ribonucleoprotein complex | 2.32E-02 |
| 41 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.95E-02 |
| 42 | GO:0005819: spindle | 3.54E-02 |
| 43 | GO:0005730: nucleolus | 3.57E-02 |
| 44 | GO:0005802: trans-Golgi network | 4.12E-02 |
| 45 | GO:0005768: endosome | 4.82E-02 |
| 46 | GO:0000502: proteasome complex | 4.92E-02 |