GO Enrichment Analysis of Co-expressed Genes with
AT2G28840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0012502: induction of programmed cell death | 0.00E+00 |
| 2 | GO:0010378: temperature compensation of the circadian clock | 0.00E+00 |
| 3 | GO:0000380: alternative mRNA splicing, via spliceosome | 2.12E-06 |
| 4 | GO:0042542: response to hydrogen peroxide | 2.21E-05 |
| 5 | GO:1990641: response to iron ion starvation | 3.12E-05 |
| 6 | GO:0006101: citrate metabolic process | 7.88E-05 |
| 7 | GO:0009651: response to salt stress | 9.94E-05 |
| 8 | GO:0007623: circadian rhythm | 1.46E-04 |
| 9 | GO:0015749: monosaccharide transport | 2.04E-04 |
| 10 | GO:0015743: malate transport | 2.76E-04 |
| 11 | GO:0010508: positive regulation of autophagy | 2.76E-04 |
| 12 | GO:0006646: phosphatidylethanolamine biosynthetic process | 2.76E-04 |
| 13 | GO:0006970: response to osmotic stress | 2.93E-04 |
| 14 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 3.53E-04 |
| 15 | GO:0010043: response to zinc ion | 3.84E-04 |
| 16 | GO:0045087: innate immune response | 4.20E-04 |
| 17 | GO:0035194: posttranscriptional gene silencing by RNA | 4.34E-04 |
| 18 | GO:0009414: response to water deprivation | 4.41E-04 |
| 19 | GO:0006491: N-glycan processing | 6.99E-04 |
| 20 | GO:0032508: DNA duplex unwinding | 6.99E-04 |
| 21 | GO:0006102: isocitrate metabolic process | 6.99E-04 |
| 22 | GO:0009409: response to cold | 7.26E-04 |
| 23 | GO:0001510: RNA methylation | 7.94E-04 |
| 24 | GO:0009808: lignin metabolic process | 7.94E-04 |
| 25 | GO:0007064: mitotic sister chromatid cohesion | 1.10E-03 |
| 26 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.77E-03 |
| 27 | GO:0006406: mRNA export from nucleus | 1.92E-03 |
| 28 | GO:0010468: regulation of gene expression | 2.01E-03 |
| 29 | GO:0009269: response to desiccation | 2.19E-03 |
| 30 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.75E-03 |
| 31 | GO:0042391: regulation of membrane potential | 2.90E-03 |
| 32 | GO:0010501: RNA secondary structure unwinding | 2.90E-03 |
| 33 | GO:0046323: glucose import | 3.05E-03 |
| 34 | GO:0042752: regulation of circadian rhythm | 3.20E-03 |
| 35 | GO:0008654: phospholipid biosynthetic process | 3.36E-03 |
| 36 | GO:0006914: autophagy | 4.00E-03 |
| 37 | GO:0001666: response to hypoxia | 4.52E-03 |
| 38 | GO:0010029: regulation of seed germination | 4.69E-03 |
| 39 | GO:0006950: response to stress | 5.05E-03 |
| 40 | GO:0009817: defense response to fungus, incompatible interaction | 5.42E-03 |
| 41 | GO:0010218: response to far red light | 5.79E-03 |
| 42 | GO:0010119: regulation of stomatal movement | 5.99E-03 |
| 43 | GO:0009637: response to blue light | 6.38E-03 |
| 44 | GO:0006099: tricarboxylic acid cycle | 6.58E-03 |
| 45 | GO:0007165: signal transduction | 7.18E-03 |
| 46 | GO:0009737: response to abscisic acid | 7.39E-03 |
| 47 | GO:0009735: response to cytokinin | 7.61E-03 |
| 48 | GO:0009644: response to high light intensity | 8.03E-03 |
| 49 | GO:0009636: response to toxic substance | 8.24E-03 |
| 50 | GO:0000165: MAPK cascade | 8.68E-03 |
| 51 | GO:0035556: intracellular signal transduction | 8.79E-03 |
| 52 | GO:0009585: red, far-red light phototransduction | 9.36E-03 |
| 53 | GO:0051603: proteolysis involved in cellular protein catabolic process | 9.59E-03 |
| 54 | GO:0006396: RNA processing | 1.22E-02 |
| 55 | GO:0006633: fatty acid biosynthetic process | 1.65E-02 |
| 56 | GO:0006413: translational initiation | 1.68E-02 |
| 57 | GO:0006979: response to oxidative stress | 1.71E-02 |
| 58 | GO:0009739: response to gibberellin | 1.91E-02 |
| 59 | GO:0009617: response to bacterium | 2.00E-02 |
| 60 | GO:0080167: response to karrikin | 2.81E-02 |
| 61 | GO:0044550: secondary metabolite biosynthetic process | 2.98E-02 |
| 62 | GO:0009408: response to heat | 3.71E-02 |
| 63 | GO:0008152: metabolic process | 3.97E-02 |
| 64 | GO:0016310: phosphorylation | 4.14E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity | 0.00E+00 |
| 2 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 3 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 4 | GO:0009679: hexose:proton symporter activity | 3.12E-05 |
| 5 | GO:0003994: aconitate hydratase activity | 7.88E-05 |
| 6 | GO:0047209: coniferyl-alcohol glucosyltransferase activity | 7.88E-05 |
| 7 | GO:0004609: phosphatidylserine decarboxylase activity | 7.88E-05 |
| 8 | GO:0048027: mRNA 5'-UTR binding | 2.04E-04 |
| 9 | GO:0004737: pyruvate decarboxylase activity | 2.76E-04 |
| 10 | GO:0005253: anion channel activity | 2.76E-04 |
| 11 | GO:0015145: monosaccharide transmembrane transporter activity | 3.53E-04 |
| 12 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 3.53E-04 |
| 13 | GO:0030976: thiamine pyrophosphate binding | 4.34E-04 |
| 14 | GO:0016831: carboxy-lyase activity | 6.07E-04 |
| 15 | GO:0015140: malate transmembrane transporter activity | 6.07E-04 |
| 16 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 8.92E-04 |
| 17 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 9.92E-04 |
| 18 | GO:0030552: cAMP binding | 1.67E-03 |
| 19 | GO:0030553: cGMP binding | 1.67E-03 |
| 20 | GO:0051087: chaperone binding | 2.05E-03 |
| 21 | GO:0005216: ion channel activity | 2.05E-03 |
| 22 | GO:0004707: MAP kinase activity | 2.19E-03 |
| 23 | GO:0030551: cyclic nucleotide binding | 2.90E-03 |
| 24 | GO:0005249: voltage-gated potassium channel activity | 2.90E-03 |
| 25 | GO:0004197: cysteine-type endopeptidase activity | 3.68E-03 |
| 26 | GO:0003697: single-stranded DNA binding | 6.38E-03 |
| 27 | GO:0051539: 4 iron, 4 sulfur cluster binding | 6.98E-03 |
| 28 | GO:0003690: double-stranded DNA binding | 9.59E-03 |
| 29 | GO:0016301: kinase activity | 9.79E-03 |
| 30 | GO:0008234: cysteine-type peptidase activity | 1.01E-02 |
| 31 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.13E-02 |
| 32 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.13E-02 |
| 33 | GO:0005507: copper ion binding | 1.19E-02 |
| 34 | GO:0005516: calmodulin binding | 1.25E-02 |
| 35 | GO:0015144: carbohydrate transmembrane transporter activity | 1.60E-02 |
| 36 | GO:0005351: sugar:proton symporter activity | 1.74E-02 |
| 37 | GO:0008194: UDP-glycosyltransferase activity | 1.91E-02 |
| 38 | GO:0003743: translation initiation factor activity | 1.97E-02 |
| 39 | GO:0008168: methyltransferase activity | 2.34E-02 |
| 40 | GO:0000287: magnesium ion binding | 2.38E-02 |
| 41 | GO:0003682: chromatin binding | 2.51E-02 |
| 42 | GO:0003729: mRNA binding | 2.52E-02 |
| 43 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000323: lytic vacuole | 2.04E-04 |
| 2 | GO:0005847: mRNA cleavage and polyadenylation specificity factor complex | 3.53E-04 |
| 3 | GO:0005851: eukaryotic translation initiation factor 2B complex | 4.34E-04 |
| 4 | GO:0005764: lysosome | 1.55E-03 |
| 5 | GO:0005886: plasma membrane | 6.29E-03 |
| 6 | GO:0009506: plasmodesma | 6.46E-03 |
| 7 | GO:0005777: peroxisome | 9.56E-03 |
| 8 | GO:0005834: heterotrimeric G-protein complex | 1.10E-02 |
| 9 | GO:0005654: nucleoplasm | 1.38E-02 |
| 10 | GO:0048046: apoplast | 1.46E-02 |
| 11 | GO:0009705: plant-type vacuole membrane | 1.77E-02 |
| 12 | GO:0005615: extracellular space | 1.91E-02 |
| 13 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.57E-02 |
| 14 | GO:0005737: cytoplasm | 2.95E-02 |
| 15 | GO:0043231: intracellular membrane-bounded organelle | 3.97E-02 |
| 16 | GO:0005887: integral component of plasma membrane | 4.61E-02 |