Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G26690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904964: positive regulation of phytol biosynthetic process0.00E+00
2GO:0015739: sialic acid transport0.00E+00
3GO:0090071: negative regulation of ribosome biogenesis0.00E+00
4GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
5GO:0035674: tricarboxylic acid transmembrane transport0.00E+00
6GO:0031129: inductive cell-cell signaling0.00E+00
7GO:1904966: positive regulation of vitamin E biosynthetic process0.00E+00
8GO:0015670: carbon dioxide transport0.00E+00
9GO:0006086: acetyl-CoA biosynthetic process from pyruvate8.86E-07
10GO:0010027: thylakoid membrane organization9.61E-07
11GO:1902326: positive regulation of chlorophyll biosynthetic process2.37E-06
12GO:0090391: granum assembly8.63E-06
13GO:0016120: carotene biosynthetic process5.76E-05
14GO:0015979: photosynthesis8.85E-05
15GO:0006810: transport1.07E-04
16GO:0010196: nonphotochemical quenching1.54E-04
17GO:0043686: co-translational protein modification2.25E-04
18GO:1902458: positive regulation of stomatal opening2.25E-04
19GO:0006835: dicarboxylic acid transport2.25E-04
20GO:0071588: hydrogen peroxide mediated signaling pathway2.25E-04
21GO:0051180: vitamin transport2.25E-04
22GO:0010482: regulation of epidermal cell division2.25E-04
23GO:0030974: thiamine pyrophosphate transport2.25E-04
24GO:0032544: plastid translation2.44E-04
25GO:0055114: oxidation-reduction process4.49E-04
26GO:0009773: photosynthetic electron transport in photosystem I4.76E-04
27GO:0042814: monopolar cell growth5.00E-04
28GO:0006729: tetrahydrobiopterin biosynthetic process5.00E-04
29GO:1903426: regulation of reactive oxygen species biosynthetic process5.00E-04
30GO:0010275: NAD(P)H dehydrogenase complex assembly5.00E-04
31GO:0010115: regulation of abscisic acid biosynthetic process5.00E-04
32GO:2000039: regulation of trichome morphogenesis5.00E-04
33GO:0015893: drug transport5.00E-04
34GO:0018298: protein-chromophore linkage5.19E-04
35GO:0006869: lipid transport6.77E-04
36GO:0010207: photosystem II assembly6.96E-04
37GO:0006954: inflammatory response8.13E-04
38GO:0045604: regulation of epidermal cell differentiation8.13E-04
39GO:0009062: fatty acid catabolic process8.13E-04
40GO:0006833: water transport8.64E-04
41GO:0055085: transmembrane transport8.97E-04
42GO:0031408: oxylipin biosynthetic process1.15E-03
43GO:0071484: cellular response to light intensity1.16E-03
44GO:0080170: hydrogen peroxide transmembrane transport1.16E-03
45GO:0006424: glutamyl-tRNA aminoacylation1.16E-03
46GO:0048530: fruit morphogenesis1.16E-03
47GO:0009658: chloroplast organization1.49E-03
48GO:0009765: photosynthesis, light harvesting1.54E-03
49GO:0006183: GTP biosynthetic process1.54E-03
50GO:0031122: cytoplasmic microtubule organization1.54E-03
51GO:0006096: glycolytic process1.71E-03
52GO:0034220: ion transmembrane transport1.73E-03
53GO:0042335: cuticle development1.73E-03
54GO:0010182: sugar mediated signaling pathway1.87E-03
55GO:0006564: L-serine biosynthetic process1.97E-03
56GO:0010236: plastoquinone biosynthetic process1.97E-03
57GO:0045038: protein import into chloroplast thylakoid membrane1.97E-03
58GO:0031365: N-terminal protein amino acid modification1.97E-03
59GO:0030308: negative regulation of cell growth1.97E-03
60GO:0032543: mitochondrial translation1.97E-03
61GO:0071555: cell wall organization2.25E-03
62GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.30E-03
63GO:0006561: proline biosynthetic process2.43E-03
64GO:0010405: arabinogalactan protein metabolic process2.43E-03
65GO:0042549: photosystem II stabilization2.43E-03
66GO:0010190: cytochrome b6f complex assembly2.43E-03
67GO:0018258: protein O-linked glycosylation via hydroxyproline2.43E-03
68GO:0010189: vitamin E biosynthetic process2.91E-03
69GO:0010019: chloroplast-nucleus signaling pathway2.91E-03
70GO:0048444: floral organ morphogenesis2.91E-03
71GO:0009955: adaxial/abaxial pattern specification2.91E-03
72GO:0042372: phylloquinone biosynthetic process2.91E-03
73GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.91E-03
74GO:1901259: chloroplast rRNA processing2.91E-03
75GO:0017148: negative regulation of translation2.91E-03
76GO:0006694: steroid biosynthetic process2.91E-03
77GO:0048280: vesicle fusion with Golgi apparatus2.91E-03
78GO:0006400: tRNA modification3.43E-03
79GO:0009395: phospholipid catabolic process3.43E-03
80GO:1900057: positive regulation of leaf senescence3.43E-03
81GO:0010444: guard mother cell differentiation3.43E-03
82GO:0015995: chlorophyll biosynthetic process3.89E-03
83GO:2000070: regulation of response to water deprivation3.98E-03
84GO:0016559: peroxisome fission3.98E-03
85GO:0008610: lipid biosynthetic process3.98E-03
86GO:0006605: protein targeting3.98E-03
87GO:0007623: circadian rhythm4.34E-03
88GO:0009808: lignin metabolic process4.56E-03
89GO:0015996: chlorophyll catabolic process4.56E-03
90GO:0007186: G-protein coupled receptor signaling pathway4.56E-03
91GO:0015780: nucleotide-sugar transport5.16E-03
92GO:0010206: photosystem II repair5.16E-03
93GO:0010205: photoinhibition5.79E-03
94GO:0006839: mitochondrial transport6.22E-03
95GO:0009688: abscisic acid biosynthetic process6.45E-03
96GO:0006896: Golgi to vacuole transport6.45E-03
97GO:0019538: protein metabolic process6.45E-03
98GO:0009750: response to fructose7.13E-03
99GO:0008643: carbohydrate transport7.61E-03
100GO:0042254: ribosome biogenesis7.75E-03
101GO:0010152: pollen maturation7.84E-03
102GO:0045037: protein import into chloroplast stroma7.84E-03
103GO:0009718: anthocyanin-containing compound biosynthetic process8.57E-03
104GO:0009725: response to hormone8.57E-03
105GO:0007049: cell cycle8.71E-03
106GO:0006412: translation8.83E-03
107GO:0009416: response to light stimulus8.96E-03
108GO:0010020: chloroplast fission9.33E-03
109GO:0010025: wax biosynthetic process1.09E-02
110GO:0006636: unsaturated fatty acid biosynthetic process1.09E-02
111GO:0000027: ribosomal large subunit assembly1.17E-02
112GO:0007017: microtubule-based process1.26E-02
113GO:0009695: jasmonic acid biosynthetic process1.26E-02
114GO:0016998: cell wall macromolecule catabolic process1.34E-02
115GO:0030245: cellulose catabolic process1.43E-02
116GO:0005975: carbohydrate metabolic process1.61E-02
117GO:0009306: protein secretion1.62E-02
118GO:0048443: stamen development1.62E-02
119GO:0006817: phosphate ion transport1.62E-02
120GO:0010091: trichome branching1.62E-02
121GO:0042127: regulation of cell proliferation1.62E-02
122GO:0016117: carotenoid biosynthetic process1.71E-02
123GO:0042147: retrograde transport, endosome to Golgi1.71E-02
124GO:0000413: protein peptidyl-prolyl isomerization1.81E-02
125GO:0000226: microtubule cytoskeleton organization1.81E-02
126GO:0048868: pollen tube development1.91E-02
127GO:0008360: regulation of cell shape1.91E-02
128GO:0042744: hydrogen peroxide catabolic process1.94E-02
129GO:0006623: protein targeting to vacuole2.11E-02
130GO:0006635: fatty acid beta-oxidation2.22E-02
131GO:0016132: brassinosteroid biosynthetic process2.22E-02
132GO:0071554: cell wall organization or biogenesis2.22E-02
133GO:0000302: response to reactive oxygen species2.22E-02
134GO:0006891: intra-Golgi vesicle-mediated transport2.22E-02
135GO:1901657: glycosyl compound metabolic process2.43E-02
136GO:0009414: response to water deprivation2.49E-02
137GO:0009735: response to cytokinin3.00E-02
138GO:0048573: photoperiodism, flowering3.24E-02
139GO:0010411: xyloglucan metabolic process3.24E-02
140GO:0006888: ER to Golgi vesicle-mediated transport3.24E-02
141GO:0016311: dephosphorylation3.36E-02
142GO:0000160: phosphorelay signal transduction system3.61E-02
143GO:0010311: lateral root formation3.61E-02
144GO:0009834: plant-type secondary cell wall biogenesis3.73E-02
145GO:0009407: toxin catabolic process3.73E-02
146GO:0009631: cold acclimation3.86E-02
147GO:0045893: positive regulation of transcription, DNA-templated3.97E-02
148GO:0009637: response to blue light4.12E-02
149GO:0034599: cellular response to oxidative stress4.25E-02
150GO:0080167: response to karrikin4.49E-02
151GO:0009744: response to sucrose4.93E-02
152GO:0051707: response to other organism4.93E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:1990534: thermospermine oxidase activity0.00E+00
3GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
4GO:0015142: tricarboxylic acid transmembrane transporter activity0.00E+00
5GO:0050614: delta24-sterol reductase activity0.00E+00
6GO:0045436: lycopene beta cyclase activity0.00E+00
7GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity0.00E+00
8GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
9GO:0010301: xanthoxin dehydrogenase activity0.00E+00
10GO:0038198: auxin receptor activity0.00E+00
11GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
12GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity0.00E+00
13GO:0015136: sialic acid transmembrane transporter activity0.00E+00
14GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
15GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity1.99E-07
16GO:0019843: rRNA binding4.38E-06
17GO:0043495: protein anchor3.60E-05
18GO:0022891: substrate-specific transmembrane transporter activity1.04E-04
19GO:0019899: enzyme binding1.54E-04
20GO:0042802: identical protein binding1.89E-04
21GO:0004328: formamidase activity2.25E-04
22GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity2.25E-04
23GO:0008809: carnitine racemase activity2.25E-04
24GO:0050139: nicotinate-N-glucosyltransferase activity2.25E-04
25GO:0030794: (S)-coclaurine-N-methyltransferase activity2.25E-04
26GO:0090422: thiamine pyrophosphate transporter activity2.25E-04
27GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity2.25E-04
28GO:0008568: microtubule-severing ATPase activity2.25E-04
29GO:0042586: peptide deformylase activity2.25E-04
30GO:0004321: fatty-acyl-CoA synthase activity2.25E-04
31GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity2.25E-04
32GO:0005080: protein kinase C binding2.25E-04
33GO:0016788: hydrolase activity, acting on ester bonds2.89E-04
34GO:0016168: chlorophyll binding3.95E-04
35GO:0004617: phosphoglycerate dehydrogenase activity5.00E-04
36GO:0003938: IMP dehydrogenase activity5.00E-04
37GO:0004802: transketolase activity5.00E-04
38GO:0000822: inositol hexakisphosphate binding5.00E-04
39GO:0005310: dicarboxylic acid transmembrane transporter activity8.13E-04
40GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity1.16E-03
41GO:0043023: ribosomal large subunit binding1.16E-03
42GO:0004165: dodecenoyl-CoA delta-isomerase activity1.16E-03
43GO:0017077: oxidative phosphorylation uncoupler activity1.16E-03
44GO:0001872: (1->3)-beta-D-glucan binding1.16E-03
45GO:0016851: magnesium chelatase activity1.16E-03
46GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.16E-03
47GO:0008289: lipid binding1.48E-03
48GO:0010011: auxin binding1.54E-03
49GO:0004045: aminoacyl-tRNA hydrolase activity1.54E-03
50GO:0080032: methyl jasmonate esterase activity1.54E-03
51GO:0052793: pectin acetylesterase activity1.54E-03
52GO:0052689: carboxylic ester hydrolase activity2.41E-03
53GO:0016688: L-ascorbate peroxidase activity2.43E-03
54GO:0080030: methyl indole-3-acetate esterase activity2.43E-03
55GO:1990714: hydroxyproline O-galactosyltransferase activity2.43E-03
56GO:0004130: cytochrome-c peroxidase activity2.43E-03
57GO:0016208: AMP binding2.43E-03
58GO:0015250: water channel activity3.31E-03
59GO:0004620: phospholipase activity3.43E-03
60GO:0005338: nucleotide-sugar transmembrane transporter activity3.43E-03
61GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.70E-03
62GO:0016491: oxidoreductase activity3.88E-03
63GO:0052747: sinapyl alcohol dehydrogenase activity3.98E-03
64GO:0004033: aldo-keto reductase (NADP) activity3.98E-03
65GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.56E-03
66GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors5.16E-03
67GO:0016207: 4-coumarate-CoA ligase activity5.16E-03
68GO:0003993: acid phosphatase activity5.71E-03
69GO:0047372: acylglycerol lipase activity7.13E-03
70GO:0045551: cinnamyl-alcohol dehydrogenase activity7.84E-03
71GO:0008378: galactosyltransferase activity7.84E-03
72GO:0051287: NAD binding8.53E-03
73GO:0005315: inorganic phosphate transmembrane transporter activity8.57E-03
74GO:0031072: heat shock protein binding8.57E-03
75GO:0004565: beta-galactosidase activity8.57E-03
76GO:0004022: alcohol dehydrogenase (NAD) activity8.57E-03
77GO:0003735: structural constituent of ribosome8.69E-03
78GO:0008131: primary amine oxidase activity9.33E-03
79GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.33E-03
80GO:0008146: sulfotransferase activity1.01E-02
81GO:0043424: protein histidine kinase binding1.26E-02
82GO:0016874: ligase activity1.28E-02
83GO:0030570: pectate lyase activity1.53E-02
84GO:0008810: cellulase activity1.53E-02
85GO:0008514: organic anion transmembrane transporter activity1.62E-02
86GO:0003924: GTPase activity1.63E-02
87GO:0016758: transferase activity, transferring hexosyl groups1.65E-02
88GO:0004872: receptor activity2.11E-02
89GO:0016762: xyloglucan:xyloglucosyl transferase activity2.22E-02
90GO:0000156: phosphorelay response regulator activity2.43E-02
91GO:0016759: cellulose synthase activity2.54E-02
92GO:0005200: structural constituent of cytoskeleton2.65E-02
93GO:0016413: O-acetyltransferase activity2.77E-02
94GO:0016597: amino acid binding2.77E-02
95GO:0003824: catalytic activity2.96E-02
96GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.99E-02
97GO:0005215: transporter activity2.99E-02
98GO:0016798: hydrolase activity, acting on glycosyl bonds3.24E-02
99GO:0102483: scopolin beta-glucosidase activity3.24E-02
100GO:0030247: polysaccharide binding3.24E-02
101GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.36E-02
102GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.48E-02
103GO:0008168: methyltransferase activity3.50E-02
104GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.73E-02
105GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.86E-02
106GO:0000149: SNARE binding4.39E-02
107GO:0008422: beta-glucosidase activity4.39E-02
108GO:0051539: 4 iron, 4 sulfur cluster binding4.52E-02
109GO:0004364: glutathione transferase activity4.79E-02
110GO:0030246: carbohydrate binding4.82E-02
111GO:0005484: SNAP receptor activity4.93E-02
RankGO TermAdjusted P value
1GO:0010240: plastid pyruvate dehydrogenase complex0.00E+00
2GO:0009515: granal stacked thylakoid0.00E+00
3GO:0009507: chloroplast1.57E-28
4GO:0009535: chloroplast thylakoid membrane5.36E-15
5GO:0009941: chloroplast envelope5.38E-12
6GO:0009570: chloroplast stroma7.88E-10
7GO:0009534: chloroplast thylakoid3.06E-09
8GO:0046658: anchored component of plasma membrane1.92E-06
9GO:0009579: thylakoid3.13E-05
10GO:0016021: integral component of membrane1.23E-04
11GO:0009523: photosystem II2.03E-04
12GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex2.25E-04
13GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.95E-04
14GO:0009706: chloroplast inner membrane3.32E-04
15GO:0031969: chloroplast membrane4.16E-04
16GO:0009543: chloroplast thylakoid lumen4.74E-04
17GO:0009528: plastid inner membrane8.13E-04
18GO:0010007: magnesium chelatase complex8.13E-04
19GO:0042651: thylakoid membrane1.05E-03
20GO:0015630: microtubule cytoskeleton1.16E-03
21GO:0031225: anchored component of membrane1.34E-03
22GO:0009527: plastid outer membrane1.54E-03
23GO:0009533: chloroplast stromal thylakoid3.43E-03
24GO:0012507: ER to Golgi transport vesicle membrane3.98E-03
25GO:0019005: SCF ubiquitin ligase complex4.31E-03
26GO:0009707: chloroplast outer membrane4.31E-03
27GO:0005763: mitochondrial small ribosomal subunit5.16E-03
28GO:0008180: COP9 signalosome5.16E-03
29GO:0031977: thylakoid lumen6.49E-03
30GO:0005840: ribosome8.47E-03
31GO:0000312: plastid small ribosomal subunit9.33E-03
32GO:0030095: chloroplast photosystem II9.33E-03
33GO:0009505: plant-type cell wall1.16E-02
34GO:0009654: photosystem II oxygen evolving complex1.26E-02
35GO:0000139: Golgi membrane1.32E-02
36GO:0015935: small ribosomal subunit1.34E-02
37GO:0009532: plastid stroma1.34E-02
38GO:0019898: extrinsic component of membrane2.11E-02
39GO:0005778: peroxisomal membrane2.65E-02
40GO:0010319: stromule2.65E-02
41GO:0048046: apoplast2.75E-02
42GO:0030529: intracellular ribonucleoprotein complex2.88E-02
43GO:0005886: plasma membrane3.16E-02
44GO:0005618: cell wall3.22E-02
45GO:0009536: plastid3.48E-02
46GO:0000151: ubiquitin ligase complex3.48E-02
47GO:0015934: large ribosomal subunit3.86E-02
48GO:0005777: peroxisome3.97E-02
49GO:0005874: microtubule4.34E-02
50GO:0031201: SNARE complex4.66E-02
51GO:0031902: late endosome membrane4.66E-02
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Gene type



Gene DE type