Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G25110

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901137: carbohydrate derivative biosynthetic process0.00E+00
2GO:0044794: positive regulation by host of viral process0.00E+00
3GO:0070212: protein poly-ADP-ribosylation0.00E+00
4GO:0045792: negative regulation of cell size0.00E+00
5GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
6GO:0006042: glucosamine biosynthetic process0.00E+00
7GO:0006457: protein folding1.33E-13
8GO:0055074: calcium ion homeostasis1.76E-06
9GO:0034976: response to endoplasmic reticulum stress6.83E-06
10GO:0006465: signal peptide processing1.32E-05
11GO:0009626: plant-type hypersensitive response3.02E-05
12GO:0030968: endoplasmic reticulum unfolded protein response6.46E-05
13GO:0009609: response to symbiotic bacterium9.33E-05
14GO:0050691: regulation of defense response to virus by host9.33E-05
15GO:0002237: response to molecule of bacterial origin2.08E-04
16GO:0045041: protein import into mitochondrial intermembrane space2.20E-04
17GO:0031204: posttranslational protein targeting to membrane, translocation2.20E-04
18GO:0009838: abscission2.20E-04
19GO:0010200: response to chitin3.38E-04
20GO:0048281: inflorescence morphogenesis3.67E-04
21GO:0010581: regulation of starch biosynthetic process3.67E-04
22GO:0006954: inflammatory response3.67E-04
23GO:1902626: assembly of large subunit precursor of preribosome3.67E-04
24GO:0071398: cellular response to fatty acid3.67E-04
25GO:0006651: diacylglycerol biosynthetic process3.67E-04
26GO:0009620: response to fungus4.21E-04
27GO:0009553: embryo sac development4.55E-04
28GO:0009306: protein secretion4.62E-04
29GO:0046686: response to cadmium ion4.66E-04
30GO:0043207: response to external biotic stimulus5.28E-04
31GO:0072334: UDP-galactose transmembrane transport5.28E-04
32GO:0009651: response to salt stress5.88E-04
33GO:0080037: negative regulation of cytokinin-activated signaling pathway7.02E-04
34GO:0010193: response to ozone7.11E-04
35GO:2000762: regulation of phenylpropanoid metabolic process8.88E-04
36GO:0046283: anthocyanin-containing compound metabolic process8.88E-04
37GO:0006979: response to oxidative stress9.16E-04
38GO:0009617: response to bacterium1.16E-03
39GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.29E-03
40GO:0042026: protein refolding1.29E-03
41GO:0006458: 'de novo' protein folding1.29E-03
42GO:0009610: response to symbiotic fungus1.51E-03
43GO:0050829: defense response to Gram-negative bacterium1.51E-03
44GO:0030162: regulation of proteolysis1.75E-03
45GO:0006605: protein targeting1.75E-03
46GO:0006102: isocitrate metabolic process1.75E-03
47GO:0010204: defense response signaling pathway, resistance gene-independent2.00E-03
48GO:0051707: response to other organism2.10E-03
49GO:0010112: regulation of systemic acquired resistance2.25E-03
50GO:0006189: 'de novo' IMP biosynthetic process2.25E-03
51GO:0015780: nucleotide-sugar transport2.25E-03
52GO:0009835: fruit ripening2.25E-03
53GO:0031347: regulation of defense response2.54E-03
54GO:0051555: flavonol biosynthetic process2.80E-03
55GO:0009870: defense response signaling pathway, resistance gene-dependent2.80E-03
56GO:0006032: chitin catabolic process2.80E-03
57GO:0051603: proteolysis involved in cellular protein catabolic process2.91E-03
58GO:0072593: reactive oxygen species metabolic process3.09E-03
59GO:0009751: response to salicylic acid3.38E-03
60GO:0009408: response to heat3.45E-03
61GO:0010075: regulation of meristem growth3.69E-03
62GO:0008152: metabolic process3.90E-03
63GO:0009934: regulation of meristem structural organization4.01E-03
64GO:0048467: gynoecium development4.01E-03
65GO:0042742: defense response to bacterium4.05E-03
66GO:0000027: ribosomal large subunit assembly5.01E-03
67GO:0009863: salicylic acid mediated signaling pathway5.01E-03
68GO:0009695: jasmonic acid biosynthetic process5.36E-03
69GO:0061077: chaperone-mediated protein folding5.72E-03
70GO:0016998: cell wall macromolecule catabolic process5.72E-03
71GO:0015031: protein transport5.82E-03
72GO:0030433: ubiquitin-dependent ERAD pathway6.09E-03
73GO:0009693: ethylene biosynthetic process6.47E-03
74GO:0009411: response to UV6.47E-03
75GO:0009555: pollen development7.13E-03
76GO:0010118: stomatal movement7.65E-03
77GO:0000413: protein peptidyl-prolyl isomerization7.65E-03
78GO:0010197: polar nucleus fusion8.06E-03
79GO:0048868: pollen tube development8.06E-03
80GO:0016032: viral process9.78E-03
81GO:0009567: double fertilization forming a zygote and endosperm1.07E-02
82GO:0042254: ribosome biogenesis1.09E-02
83GO:0001666: response to hypoxia1.21E-02
84GO:0009615: response to virus1.21E-02
85GO:0009816: defense response to bacterium, incompatible interaction1.26E-02
86GO:0009627: systemic acquired resistance1.31E-02
87GO:0006906: vesicle fusion1.31E-02
88GO:0016192: vesicle-mediated transport1.39E-02
89GO:0046777: protein autophosphorylation1.42E-02
90GO:0008219: cell death1.46E-02
91GO:0045454: cell redox homeostasis1.59E-02
92GO:0007568: aging1.62E-02
93GO:0006886: intracellular protein transport1.64E-02
94GO:0006099: tricarboxylic acid cycle1.78E-02
95GO:0006952: defense response1.78E-02
96GO:0006839: mitochondrial transport1.89E-02
97GO:0006887: exocytosis1.95E-02
98GO:0042542: response to hydrogen peroxide2.01E-02
99GO:0006508: proteolysis2.20E-02
100GO:0009965: leaf morphogenesis2.24E-02
101GO:0006855: drug transmembrane transport2.31E-02
102GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.37E-02
103GO:0009909: regulation of flower development2.75E-02
104GO:0009735: response to cytokinin3.18E-02
105GO:0009624: response to nematode3.28E-02
106GO:0018105: peptidyl-serine phosphorylation3.35E-02
107GO:0009611: response to wounding3.55E-02
108GO:0009845: seed germination4.07E-02
109GO:0006511: ubiquitin-dependent protein catabolic process4.69E-02
110GO:0010150: leaf senescence4.84E-02
RankGO TermAdjusted P value
1GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
2GO:0052873: FMN reductase (NADPH) activity0.00E+00
3GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity0.00E+00
4GO:0008752: FMN reductase activity0.00E+00
5GO:0051082: unfolded protein binding2.58E-11
6GO:0005460: UDP-glucose transmembrane transporter activity4.19E-06
7GO:0005459: UDP-galactose transmembrane transporter activity1.32E-05
8GO:0004638: phosphoribosylaminoimidazole carboxylase activity9.33E-05
9GO:0097367: carbohydrate derivative binding9.33E-05
10GO:0080042: ADP-glucose pyrophosphohydrolase activity9.33E-05
11GO:0003746: translation elongation factor activity1.40E-04
12GO:0005509: calcium ion binding1.50E-04
13GO:0017110: nucleoside-diphosphatase activity2.20E-04
14GO:0004338: glucan exo-1,3-beta-glucosidase activity2.20E-04
15GO:0008517: folic acid transporter activity2.20E-04
16GO:0080041: ADP-ribose pyrophosphohydrolase activity2.20E-04
17GO:0008233: peptidase activity3.11E-04
18GO:0004298: threonine-type endopeptidase activity3.56E-04
19GO:0003955: NAD(P)H dehydrogenase (quinone) activity3.67E-04
20GO:0046423: allene-oxide cyclase activity3.67E-04
21GO:0003756: protein disulfide isomerase activity4.62E-04
22GO:0004449: isocitrate dehydrogenase (NAD+) activity5.28E-04
23GO:0010178: IAA-amino acid conjugate hydrolase activity5.28E-04
24GO:0005086: ARF guanyl-nucleotide exchange factor activity7.02E-04
25GO:0005524: ATP binding7.09E-04
26GO:0047631: ADP-ribose diphosphatase activity8.88E-04
27GO:0000210: NAD+ diphosphatase activity1.08E-03
28GO:0008195: phosphatidate phosphatase activity1.29E-03
29GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.30E-03
30GO:0008320: protein transmembrane transporter activity1.51E-03
31GO:0047893: flavonol 3-O-glucosyltransferase activity1.75E-03
32GO:0030246: carbohydrate binding2.18E-03
33GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity2.25E-03
34GO:0051287: NAD binding2.54E-03
35GO:0004568: chitinase activity2.80E-03
36GO:0044183: protein binding involved in protein folding3.09E-03
37GO:0008559: xenobiotic-transporting ATPase activity3.09E-03
38GO:0031625: ubiquitin protein ligase binding3.11E-03
39GO:0080044: quercetin 7-O-glucosyltransferase activity3.65E-03
40GO:0080043: quercetin 3-O-glucosyltransferase activity3.65E-03
41GO:0015114: phosphate ion transmembrane transporter activity3.69E-03
42GO:0031072: heat shock protein binding3.69E-03
43GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.01E-03
44GO:0016758: transferase activity, transferring hexosyl groups4.86E-03
45GO:0031418: L-ascorbic acid binding5.01E-03
46GO:0035251: UDP-glucosyltransferase activity5.72E-03
47GO:0016887: ATPase activity6.00E-03
48GO:0008810: cellulase activity6.47E-03
49GO:0008194: UDP-glycosyltransferase activity7.69E-03
50GO:0016853: isomerase activity8.47E-03
51GO:0010181: FMN binding8.47E-03
52GO:0008483: transaminase activity1.11E-02
53GO:0008237: metallopeptidase activity1.11E-02
54GO:0043531: ADP binding1.17E-02
55GO:0009931: calcium-dependent protein serine/threonine kinase activity1.31E-02
56GO:0004806: triglyceride lipase activity1.36E-02
57GO:0030247: polysaccharide binding1.36E-02
58GO:0004683: calmodulin-dependent protein kinase activity1.36E-02
59GO:0004222: metalloendopeptidase activity1.56E-02
60GO:0050897: cobalt ion binding1.62E-02
61GO:0000149: SNARE binding1.84E-02
62GO:0003924: GTPase activity1.96E-02
63GO:0005484: SNAP receptor activity2.07E-02
64GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.31E-02
65GO:0016298: lipase activity2.62E-02
66GO:0008565: protein transporter activity4.38E-02
67GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.61E-02
RankGO TermAdjusted P value
1GO:0031205: endoplasmic reticulum Sec complex0.00E+00
2GO:0005784: Sec61 translocon complex0.00E+00
3GO:0005788: endoplasmic reticulum lumen6.11E-16
4GO:0005783: endoplasmic reticulum2.32E-12
5GO:0005774: vacuolar membrane4.26E-09
6GO:0005773: vacuole5.23E-09
7GO:0005886: plasma membrane7.84E-08
8GO:0009507: chloroplast2.33E-06
9GO:0005618: cell wall4.55E-05
10GO:0031090: organelle membrane8.01E-05
11GO:0005787: signal peptidase complex9.33E-05
12GO:0030134: ER to Golgi transport vesicle2.20E-04
13GO:0030176: integral component of endoplasmic reticulum membrane2.34E-04
14GO:0000502: proteasome complex2.99E-04
15GO:0005839: proteasome core complex3.56E-04
16GO:0009506: plasmodesma5.02E-04
17GO:0030173: integral component of Golgi membrane1.29E-03
18GO:0005801: cis-Golgi network1.29E-03
19GO:0005789: endoplasmic reticulum membrane1.89E-03
20GO:0005740: mitochondrial envelope2.80E-03
21GO:0005747: mitochondrial respiratory chain complex I3.43E-03
22GO:0031012: extracellular matrix3.69E-03
23GO:0009505: plant-type cell wall5.70E-03
24GO:0005741: mitochondrial outer membrane5.72E-03
25GO:0005739: mitochondrion8.39E-03
26GO:0048046: apoplast8.60E-03
27GO:0016592: mediator complex9.78E-03
28GO:0022625: cytosolic large ribosomal subunit1.39E-02
29GO:0019005: SCF ubiquitin ligase complex1.46E-02
30GO:0000151: ubiquitin ligase complex1.46E-02
31GO:0000325: plant-type vacuole1.62E-02
32GO:0031201: SNARE complex1.95E-02
33GO:0043231: intracellular membrane-bounded organelle2.16E-02
34GO:0005794: Golgi apparatus2.17E-02
35GO:0016020: membrane2.19E-02
36GO:0005829: cytosol2.81E-02
37GO:0005623: cell3.93E-02
38GO:0016021: integral component of membrane4.10E-02
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Gene type



Gene DE type