Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G22990

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
2GO:0061157: mRNA destabilization0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
5GO:0015717: triose phosphate transport0.00E+00
6GO:0000476: maturation of 4.5S rRNA2.41E-05
7GO:0000967: rRNA 5'-end processing2.41E-05
8GO:0034470: ncRNA processing6.16E-05
9GO:0090342: regulation of cell aging6.16E-05
10GO:0035436: triose phosphate transmembrane transport1.09E-04
11GO:0015995: chlorophyll biosynthetic process2.15E-04
12GO:0009765: photosynthesis, light harvesting2.21E-04
13GO:0051205: protein insertion into membrane2.21E-04
14GO:0015713: phosphoglycerate transport2.21E-04
15GO:0015979: photosynthesis2.72E-04
16GO:0045038: protein import into chloroplast thylakoid membrane2.84E-04
17GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.51E-04
18GO:0009228: thiamine biosynthetic process3.51E-04
19GO:0009643: photosynthetic acclimation3.51E-04
20GO:0010114: response to red light3.92E-04
21GO:0009769: photosynthesis, light harvesting in photosystem II4.92E-04
22GO:0009645: response to low light intensity stimulus4.92E-04
23GO:0009642: response to light intensity5.68E-04
24GO:0009734: auxin-activated signaling pathway5.88E-04
25GO:0009657: plastid organization6.45E-04
26GO:0006949: syncytium formation8.92E-04
27GO:0043085: positive regulation of catalytic activity9.78E-04
28GO:0040008: regulation of growth1.18E-03
29GO:0009768: photosynthesis, light harvesting in photosystem I1.65E-03
30GO:0009269: response to desiccation1.76E-03
31GO:0016114: terpenoid biosynthetic process1.76E-03
32GO:0019748: secondary metabolic process1.87E-03
33GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.98E-03
34GO:0006662: glycerol ether metabolic process2.45E-03
35GO:0010193: response to ozone2.82E-03
36GO:0009828: plant-type cell wall loosening3.22E-03
37GO:0010027: thylakoid membrane organization3.63E-03
38GO:0018298: protein-chromophore linkage4.34E-03
39GO:0010218: response to far red light4.64E-03
40GO:0009637: response to blue light5.11E-03
41GO:0034599: cellular response to oxidative stress5.26E-03
42GO:0009644: response to high light intensity6.42E-03
43GO:0009664: plant-type cell wall organization7.11E-03
44GO:0010224: response to UV-B7.65E-03
45GO:0006417: regulation of translation8.02E-03
46GO:0043086: negative regulation of catalytic activity8.40E-03
47GO:0006396: RNA processing9.75E-03
48GO:0009733: response to auxin1.37E-02
49GO:0007623: circadian rhythm1.40E-02
50GO:0009826: unidimensional cell growth1.86E-02
51GO:0009658: chloroplast organization1.92E-02
52GO:0007275: multicellular organism development2.41E-02
53GO:0045454: cell redox homeostasis2.54E-02
54GO:0016042: lipid catabolic process2.89E-02
55GO:0006629: lipid metabolic process2.95E-02
56GO:0006397: mRNA processing3.04E-02
57GO:0006508: proteolysis3.75E-02
58GO:0009735: response to cytokinin4.16E-02
59GO:0009416: response to light stimulus4.43E-02
60GO:0009611: response to wounding4.50E-02
RankGO TermAdjusted P value
1GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
2GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.41E-05
3GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity6.16E-05
4GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity6.16E-05
5GO:0003727: single-stranded RNA binding7.37E-05
6GO:0071917: triose-phosphate transmembrane transporter activity1.09E-04
7GO:0015120: phosphoglycerate transmembrane transporter activity2.21E-04
8GO:0004602: glutathione peroxidase activity4.20E-04
9GO:0008047: enzyme activator activity8.92E-04
10GO:0004190: aspartic-type endopeptidase activity1.35E-03
11GO:0031409: pigment binding1.45E-03
12GO:0047134: protein-disulfide reductase activity2.21E-03
13GO:0004791: thioredoxin-disulfide reductase activity2.57E-03
14GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.08E-03
15GO:0016168: chlorophyll binding3.76E-03
16GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.34E-03
17GO:0008289: lipid binding4.72E-03
18GO:0004712: protein serine/threonine/tyrosine kinase activity5.42E-03
19GO:0004185: serine-type carboxypeptidase activity6.08E-03
20GO:0043621: protein self-association6.42E-03
21GO:0016298: lipase activity7.65E-03
22GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups8.59E-03
23GO:0015035: protein disulfide oxidoreductase activity9.75E-03
24GO:0046910: pectinesterase inhibitor activity1.34E-02
25GO:0015297: antiporter activity1.36E-02
26GO:0016788: hydrolase activity, acting on ester bonds1.94E-02
27GO:0008233: peptidase activity2.20E-02
28GO:0052689: carboxylic ester hydrolase activity2.40E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009534: chloroplast thylakoid2.43E-10
3GO:0009535: chloroplast thylakoid membrane2.10E-09
4GO:0009507: chloroplast2.29E-06
5GO:0009570: chloroplast stroma3.01E-05
6GO:0009517: PSII associated light-harvesting complex II2.21E-04
7GO:0030660: Golgi-associated vesicle membrane2.21E-04
8GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.21E-04
9GO:0009538: photosystem I reaction center5.68E-04
10GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.68E-04
11GO:0009941: chloroplast envelope5.89E-04
12GO:0010287: plastoglobule8.66E-04
13GO:0009543: chloroplast thylakoid lumen9.10E-04
14GO:0009579: thylakoid9.76E-04
15GO:0005765: lysosomal membrane9.78E-04
16GO:0030095: chloroplast photosystem II1.25E-03
17GO:0030076: light-harvesting complex1.35E-03
18GO:0031969: chloroplast membrane2.32E-03
19GO:0009522: photosystem I2.57E-03
20GO:0009523: photosystem II2.70E-03
21GO:0031977: thylakoid lumen5.75E-03
22GO:0010008: endosome membrane8.59E-03
23GO:0009706: chloroplast inner membrane9.56E-03
24GO:0016021: integral component of membrane1.11E-02
25GO:0005623: cell1.14E-02
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Gene type



Gene DE type