GO Enrichment Analysis of Co-expressed Genes with
AT2G21530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 5.76E-11 |
| 4 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 3.58E-07 |
| 5 | GO:0006810: transport | 4.48E-07 |
| 6 | GO:0006000: fructose metabolic process | 1.37E-06 |
| 7 | GO:0015979: photosynthesis | 1.76E-06 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.27E-06 |
| 9 | GO:0006546: glycine catabolic process | 6.24E-06 |
| 10 | GO:0019464: glycine decarboxylation via glycine cleavage system | 6.24E-06 |
| 11 | GO:0016123: xanthophyll biosynthetic process | 1.04E-05 |
| 12 | GO:0009658: chloroplast organization | 1.26E-05 |
| 13 | GO:0016117: carotenoid biosynthetic process | 1.51E-05 |
| 14 | GO:0006002: fructose 6-phosphate metabolic process | 5.19E-05 |
| 15 | GO:0018298: protein-chromophore linkage | 7.45E-05 |
| 16 | GO:0006094: gluconeogenesis | 1.49E-04 |
| 17 | GO:0005986: sucrose biosynthetic process | 1.49E-04 |
| 18 | GO:0019253: reductive pentose-phosphate cycle | 1.70E-04 |
| 19 | GO:0080183: response to photooxidative stress | 1.93E-04 |
| 20 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.67E-04 |
| 21 | GO:0061077: chaperone-mediated protein folding | 2.94E-04 |
| 22 | GO:0006696: ergosterol biosynthetic process | 3.24E-04 |
| 23 | GO:0090506: axillary shoot meristem initiation | 3.24E-04 |
| 24 | GO:0006020: inositol metabolic process | 4.66E-04 |
| 25 | GO:0006021: inositol biosynthetic process | 6.21E-04 |
| 26 | GO:0010037: response to carbon dioxide | 6.21E-04 |
| 27 | GO:0015976: carbon utilization | 6.21E-04 |
| 28 | GO:0009765: photosynthesis, light harvesting | 6.21E-04 |
| 29 | GO:0045727: positive regulation of translation | 6.21E-04 |
| 30 | GO:2000122: negative regulation of stomatal complex development | 6.21E-04 |
| 31 | GO:0016120: carotene biosynthetic process | 7.86E-04 |
| 32 | GO:0006656: phosphatidylcholine biosynthetic process | 7.86E-04 |
| 33 | GO:0009735: response to cytokinin | 9.11E-04 |
| 34 | GO:0010190: cytochrome b6f complex assembly | 9.59E-04 |
| 35 | GO:0032973: amino acid export | 9.59E-04 |
| 36 | GO:0046855: inositol phosphate dephosphorylation | 9.59E-04 |
| 37 | GO:0010067: procambium histogenesis | 1.14E-03 |
| 38 | GO:0009645: response to low light intensity stimulus | 1.34E-03 |
| 39 | GO:0043090: amino acid import | 1.34E-03 |
| 40 | GO:0010196: nonphotochemical quenching | 1.34E-03 |
| 41 | GO:0048564: photosystem I assembly | 1.54E-03 |
| 42 | GO:0009819: drought recovery | 1.54E-03 |
| 43 | GO:0032544: plastid translation | 1.76E-03 |
| 44 | GO:0017004: cytochrome complex assembly | 1.76E-03 |
| 45 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 1.76E-03 |
| 46 | GO:0010206: photosystem II repair | 1.98E-03 |
| 47 | GO:0080144: amino acid homeostasis | 1.98E-03 |
| 48 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.98E-03 |
| 49 | GO:0045454: cell redox homeostasis | 2.08E-03 |
| 50 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.22E-03 |
| 51 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.46E-03 |
| 52 | GO:0043085: positive regulation of catalytic activity | 2.71E-03 |
| 53 | GO:0000272: polysaccharide catabolic process | 2.71E-03 |
| 54 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.71E-03 |
| 55 | GO:0006790: sulfur compound metabolic process | 2.97E-03 |
| 56 | GO:0042742: defense response to bacterium | 3.02E-03 |
| 57 | GO:0009767: photosynthetic electron transport chain | 3.24E-03 |
| 58 | GO:0010223: secondary shoot formation | 3.52E-03 |
| 59 | GO:0046854: phosphatidylinositol phosphorylation | 3.81E-03 |
| 60 | GO:0005985: sucrose metabolic process | 3.81E-03 |
| 61 | GO:0006413: translational initiation | 5.30E-03 |
| 62 | GO:0016226: iron-sulfur cluster assembly | 5.34E-03 |
| 63 | GO:0001944: vasculature development | 5.67E-03 |
| 64 | GO:0010089: xylem development | 6.01E-03 |
| 65 | GO:0010087: phloem or xylem histogenesis | 6.70E-03 |
| 66 | GO:0042631: cellular response to water deprivation | 6.70E-03 |
| 67 | GO:0006662: glycerol ether metabolic process | 7.06E-03 |
| 68 | GO:0008360: regulation of cell shape | 7.06E-03 |
| 69 | GO:0015986: ATP synthesis coupled proton transport | 7.42E-03 |
| 70 | GO:0019252: starch biosynthetic process | 7.79E-03 |
| 71 | GO:0009791: post-embryonic development | 7.79E-03 |
| 72 | GO:0007264: small GTPase mediated signal transduction | 8.56E-03 |
| 73 | GO:0010090: trichome morphogenesis | 8.94E-03 |
| 74 | GO:0042254: ribosome biogenesis | 8.96E-03 |
| 75 | GO:0010286: heat acclimation | 9.75E-03 |
| 76 | GO:0010027: thylakoid membrane organization | 1.06E-02 |
| 77 | GO:0015995: chlorophyll biosynthetic process | 1.19E-02 |
| 78 | GO:0009817: defense response to fungus, incompatible interaction | 1.27E-02 |
| 79 | GO:0010218: response to far red light | 1.37E-02 |
| 80 | GO:0010119: regulation of stomatal movement | 1.41E-02 |
| 81 | GO:0016051: carbohydrate biosynthetic process | 1.51E-02 |
| 82 | GO:0009637: response to blue light | 1.51E-02 |
| 83 | GO:0009853: photorespiration | 1.51E-02 |
| 84 | GO:0034599: cellular response to oxidative stress | 1.56E-02 |
| 85 | GO:0010114: response to red light | 1.80E-02 |
| 86 | GO:0055114: oxidation-reduction process | 1.85E-02 |
| 87 | GO:0009644: response to high light intensity | 1.91E-02 |
| 88 | GO:0009409: response to cold | 2.01E-02 |
| 89 | GO:0042538: hyperosmotic salinity response | 2.12E-02 |
| 90 | GO:0006364: rRNA processing | 2.23E-02 |
| 91 | GO:0009416: response to light stimulus | 2.87E-02 |
| 92 | GO:0009845: seed germination | 3.56E-02 |
| 93 | GO:0006412: translation | 3.60E-02 |
| 94 | GO:0007623: circadian rhythm | 4.23E-02 |
| 95 | GO:0010468: regulation of gene expression | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 2 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 3 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 6 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 7 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 8 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 3.58E-07 |
| 9 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 3.27E-06 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.24E-06 |
| 11 | GO:0019843: rRNA binding | 4.09E-05 |
| 12 | GO:0016168: chlorophyll binding | 5.40E-05 |
| 13 | GO:0051996: squalene synthase activity | 8.09E-05 |
| 14 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.93E-04 |
| 15 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 1.93E-04 |
| 16 | GO:0010291: carotene beta-ring hydroxylase activity | 1.93E-04 |
| 17 | GO:0010297: heteropolysaccharide binding | 1.93E-04 |
| 18 | GO:0004047: aminomethyltransferase activity | 1.93E-04 |
| 19 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.93E-04 |
| 20 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.93E-04 |
| 21 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.93E-04 |
| 22 | GO:0008967: phosphoglycolate phosphatase activity | 1.93E-04 |
| 23 | GO:0031409: pigment binding | 2.16E-04 |
| 24 | GO:0005528: FK506 binding | 2.41E-04 |
| 25 | GO:0003913: DNA photolyase activity | 3.24E-04 |
| 26 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.24E-04 |
| 27 | GO:0048038: quinone binding | 5.92E-04 |
| 28 | GO:0005319: lipid transporter activity | 6.21E-04 |
| 29 | GO:1990137: plant seed peroxidase activity | 6.21E-04 |
| 30 | GO:0042578: phosphoric ester hydrolase activity | 9.59E-04 |
| 31 | GO:0051920: peroxiredoxin activity | 1.14E-03 |
| 32 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.14E-03 |
| 33 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.14E-03 |
| 34 | GO:0009881: photoreceptor activity | 1.34E-03 |
| 35 | GO:0016209: antioxidant activity | 1.54E-03 |
| 36 | GO:0008135: translation factor activity, RNA binding | 1.76E-03 |
| 37 | GO:0003843: 1,3-beta-D-glucan synthase activity | 1.76E-03 |
| 38 | GO:0015078: hydrogen ion transmembrane transporter activity | 1.76E-03 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.03E-03 |
| 40 | GO:0008047: enzyme activator activity | 2.46E-03 |
| 41 | GO:0004089: carbonate dehydratase activity | 3.24E-03 |
| 42 | GO:0031072: heat shock protein binding | 3.24E-03 |
| 43 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.24E-03 |
| 44 | GO:0051536: iron-sulfur cluster binding | 4.40E-03 |
| 45 | GO:0046872: metal ion binding | 4.78E-03 |
| 46 | GO:0033612: receptor serine/threonine kinase binding | 5.02E-03 |
| 47 | GO:0022891: substrate-specific transmembrane transporter activity | 5.67E-03 |
| 48 | GO:0047134: protein-disulfide reductase activity | 6.35E-03 |
| 49 | GO:0005102: receptor binding | 6.35E-03 |
| 50 | GO:0003743: translation initiation factor activity | 6.64E-03 |
| 51 | GO:0050662: coenzyme binding | 7.42E-03 |
| 52 | GO:0004791: thioredoxin-disulfide reductase activity | 7.42E-03 |
| 53 | GO:0004518: nuclease activity | 8.56E-03 |
| 54 | GO:0003735: structural constituent of ribosome | 8.57E-03 |
| 55 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.94E-03 |
| 56 | GO:0016759: cellulose synthase activity | 9.34E-03 |
| 57 | GO:0008483: transaminase activity | 9.75E-03 |
| 58 | GO:0008237: metallopeptidase activity | 9.75E-03 |
| 59 | GO:0008236: serine-type peptidase activity | 1.23E-02 |
| 60 | GO:0005509: calcium ion binding | 1.24E-02 |
| 61 | GO:0004222: metalloendopeptidase activity | 1.37E-02 |
| 62 | GO:0050897: cobalt ion binding | 1.41E-02 |
| 63 | GO:0003746: translation elongation factor activity | 1.51E-02 |
| 64 | GO:0003824: catalytic activity | 1.54E-02 |
| 65 | GO:0003924: GTPase activity | 1.62E-02 |
| 66 | GO:0009055: electron carrier activity | 1.73E-02 |
| 67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.91E-02 |
| 68 | GO:0015171: amino acid transmembrane transporter activity | 2.40E-02 |
| 69 | GO:0051082: unfolded protein binding | 2.87E-02 |
| 70 | GO:0015035: protein disulfide oxidoreductase activity | 2.93E-02 |
| 71 | GO:0016787: hydrolase activity | 3.56E-02 |
| 72 | GO:0004252: serine-type endopeptidase activity | 3.62E-02 |
| 73 | GO:0005525: GTP binding | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.70E-44 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 5.16E-26 |
| 3 | GO:0009941: chloroplast envelope | 1.63E-14 |
| 4 | GO:0009579: thylakoid | 6.54E-13 |
| 5 | GO:0009570: chloroplast stroma | 3.44E-12 |
| 6 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.25E-11 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.41E-09 |
| 8 | GO:0009534: chloroplast thylakoid | 9.17E-09 |
| 9 | GO:0031969: chloroplast membrane | 1.18E-06 |
| 10 | GO:0010287: plastoglobule | 1.60E-06 |
| 11 | GO:0005960: glycine cleavage complex | 3.27E-06 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 7.07E-06 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 8.09E-05 |
| 14 | GO:0009782: photosystem I antenna complex | 8.09E-05 |
| 15 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 8.09E-05 |
| 16 | GO:0048046: apoplast | 9.99E-05 |
| 17 | GO:0031977: thylakoid lumen | 1.36E-04 |
| 18 | GO:0030095: chloroplast photosystem II | 1.70E-04 |
| 19 | GO:0030076: light-harvesting complex | 1.93E-04 |
| 20 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.93E-04 |
| 21 | GO:0019898: extrinsic component of membrane | 5.54E-04 |
| 22 | GO:0009517: PSII associated light-harvesting complex II | 6.21E-04 |
| 23 | GO:0010319: stromule | 7.56E-04 |
| 24 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 9.59E-04 |
| 25 | GO:0015934: large ribosomal subunit | 1.25E-03 |
| 26 | GO:0009533: chloroplast stromal thylakoid | 1.34E-03 |
| 27 | GO:0009539: photosystem II reaction center | 1.76E-03 |
| 28 | GO:0005811: lipid particle | 1.76E-03 |
| 29 | GO:0000148: 1,3-beta-D-glucan synthase complex | 1.76E-03 |
| 30 | GO:0000311: plastid large ribosomal subunit | 2.97E-03 |
| 31 | GO:0005840: ribosome | 3.24E-03 |
| 32 | GO:0009706: chloroplast inner membrane | 3.31E-03 |
| 33 | GO:0042651: thylakoid membrane | 4.70E-03 |
| 34 | GO:0009522: photosystem I | 7.42E-03 |
| 35 | GO:0009523: photosystem II | 7.79E-03 |
| 36 | GO:0005778: peroxisomal membrane | 9.75E-03 |
| 37 | GO:0009707: chloroplast outer membrane | 1.27E-02 |
| 38 | GO:0005747: mitochondrial respiratory chain complex I | 2.57E-02 |
| 39 | GO:0022626: cytosolic ribosome | 2.75E-02 |
| 40 | GO:0016020: membrane | 2.91E-02 |
| 41 | GO:0016021: integral component of membrane | 3.26E-02 |
| 42 | GO:0005759: mitochondrial matrix | 3.96E-02 |
| 43 | GO:0005615: extracellular space | 4.58E-02 |