co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G20060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071731: response to nitric oxide	0.00E+00
2	GO:0043462: regulation of ATPase activity	0.00E+00
3	GO:0045041: protein import into mitochondrial intermembrane space	0.00E+00
4	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
5	GO:0061077: chaperone-mediated protein folding	9.94E-10
6	GO:0042026: protein refolding	3.02E-09
7	GO:0006458: 'de novo' protein folding	3.02E-09
8	GO:0009408: response to heat	6.00E-09
9	GO:0046686: response to cadmium ion	4.96E-08
10	GO:0006457: protein folding	8.26E-08
11	GO:1990258: histone glutamine methylation	1.67E-05
12	GO:0048448: stamen morphogenesis	1.67E-05
13	GO:0010450: inflorescence meristem growth	1.67E-05
14	GO:0000494: box C/D snoRNA 3'-end processing	1.67E-05
15	GO:0006334: nucleosome assembly	3.20E-05
16	GO:0007005: mitochondrion organization	3.57E-05
17	GO:0048833: specification of floral organ number	4.35E-05
18	GO:0006954: inflammatory response	7.77E-05
19	GO:0051131: chaperone-mediated protein complex assembly	1.17E-04
20	GO:0006986: response to unfolded protein	1.17E-04
21	GO:0051085: chaperone mediated protein folding requiring cofactor	1.17E-04
22	GO:0009651: response to salt stress	1.27E-04
23	GO:0031167: rRNA methylation	2.09E-04
24	GO:0016444: somatic cell DNA recombination	3.11E-04
25	GO:0009735: response to cytokinin	3.93E-04
26	GO:0042255: ribosome assembly	4.23E-04
27	GO:0000028: ribosomal small subunit assembly	4.23E-04
28	GO:0009880: embryonic pattern specification	4.82E-04
29	GO:0001510: RNA methylation	4.82E-04
30	GO:0010120: camalexin biosynthetic process	4.82E-04
31	GO:0006189: 'de novo' IMP biosynthetic process	5.42E-04
32	GO:0046685: response to arsenic-containing substance	5.42E-04
33	GO:0090332: stomatal closure	6.04E-04
34	GO:0006541: glutamine metabolic process	9.39E-04
35	GO:0010187: negative regulation of seed germination	1.16E-03
36	GO:0042254: ribosome biogenesis	1.24E-03
37	GO:0015992: proton transport	1.31E-03
38	GO:0098542: defense response to other organism	1.31E-03
39	GO:0009814: defense response, incompatible interaction	1.39E-03
40	GO:0009693: ethylene biosynthetic process	1.47E-03
41	GO:0070417: cellular response to cold	1.64E-03
42	GO:0008033: tRNA processing	1.73E-03
43	GO:0000413: protein peptidyl-prolyl isomerization	1.73E-03
44	GO:0032502: developmental process	2.18E-03
45	GO:0010286: heat acclimation	2.48E-03
46	GO:0009911: positive regulation of flower development	2.68E-03
47	GO:0009615: response to virus	2.68E-03
48	GO:0009816: defense response to bacterium, incompatible interaction	2.78E-03
49	GO:0048573: photoperiodism, flowering	2.99E-03
50	GO:0016049: cell growth	3.09E-03
51	GO:0010311: lateral root formation	3.31E-03
52	GO:0048527: lateral root development	3.53E-03
53	GO:0000724: double-strand break repair via homologous recombination	3.64E-03
54	GO:0009555: pollen development	3.83E-03
55	GO:0008283: cell proliferation	4.47E-03
56	GO:0009965: leaf morphogenesis	4.83E-03
57	GO:0006364: rRNA processing	5.48E-03
58	GO:0051603: proteolysis involved in cellular protein catabolic process	5.61E-03
59	GO:0009620: response to fungus	6.56E-03
60	GO:0042742: defense response to bacterium	7.73E-03
61	GO:0006413: translational initiation	9.74E-03
62	GO:0010150: leaf senescence	1.02E-02
63	GO:0009723: response to ethylene	1.54E-02
64	GO:0010200: response to chitin	1.66E-02
65	GO:0046777: protein autophosphorylation	1.70E-02
66	GO:0048364: root development	2.21E-02
67	GO:0009873: ethylene-activated signaling pathway	2.57E-02
68	GO:0009611: response to wounding	3.27E-02
69	GO:0051301: cell division	3.42E-02
70	GO:0045893: positive regulation of transcription, DNA-templated	3.55E-02
71	GO:0006511: ubiquitin-dependent protein catabolic process	4.01E-02
72	GO:0006412: translation	4.04E-02
73	GO:0006414: translational elongation	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0003922: GMP synthase (glutamine-hydrolyzing) activity	0.00E+00
2	GO:0051082: unfolded protein binding	1.65E-15
3	GO:0044183: protein binding involved in protein folding	4.19E-08
4	GO:0005524: ATP binding	1.52E-05
5	GO:0030295: protein kinase activator activity	1.67E-05
6	GO:1990259: histone-glutamine methyltransferase activity	1.67E-05
7	GO:0004638: phosphoribosylaminoimidazole carboxylase activity	1.67E-05
8	GO:0008649: rRNA methyltransferase activity	7.77E-05
9	GO:0002020: protease binding	2.09E-04
10	GO:0042393: histone binding	2.19E-04
11	GO:0016462: pyrophosphatase activity	2.59E-04
12	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.91E-04
13	GO:0030515: snoRNA binding	3.66E-04
14	GO:0004708: MAP kinase kinase activity	4.23E-04
15	GO:0001055: RNA polymerase II activity	6.04E-04
16	GO:0005507: copper ion binding	6.86E-04
17	GO:0001054: RNA polymerase I activity	7.34E-04
18	GO:0001056: RNA polymerase III activity	8.01E-04
19	GO:0031072: heat shock protein binding	8.70E-04
20	GO:0005528: FK506 binding	1.16E-03
21	GO:0051087: chaperone binding	1.23E-03
22	GO:0004298: threonine-type endopeptidase activity	1.31E-03
23	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.48E-03
24	GO:0003735: structural constituent of ribosome	2.50E-03
25	GO:0050897: cobalt ion binding	3.53E-03
26	GO:0003746: translation elongation factor activity	3.76E-03
27	GO:0043621: protein self-association	4.71E-03
28	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.48E-03
29	GO:0003743: translation initiation factor activity	1.14E-02
30	GO:0003723: RNA binding	1.41E-02
31	GO:0003682: chromatin binding	1.45E-02
32	GO:0008233: peptidase activity	1.60E-02
33	GO:0003924: GTPase activity	2.14E-02
34	GO:0000166: nucleotide binding	3.22E-02
35	GO:0016740: transferase activity	3.71E-02
36	GO:0005525: GTP binding	4.59E-02

Rank	GO Term	Adjusted P value
1	GO:0005774: vacuolar membrane	1.53E-09
2	GO:0005829: cytosol	2.39E-09
3	GO:0005747: mitochondrial respiratory chain complex I	1.48E-05
4	GO:0005730: nucleolus	2.84E-05
5	GO:0005759: mitochondrial matrix	3.92E-05
6	GO:0005739: mitochondrion	9.58E-05
7	GO:0005618: cell wall	1.77E-04
8	GO:0031428: box C/D snoRNP complex	2.59E-04
9	GO:0005762: mitochondrial large ribosomal subunit	3.11E-04
10	GO:0022626: cytosolic ribosome	4.17E-04
11	GO:0005763: mitochondrial small ribosomal subunit	5.42E-04
12	GO:0005736: DNA-directed RNA polymerase I complex	5.42E-04
13	GO:0005666: DNA-directed RNA polymerase III complex	6.04E-04
14	GO:0015030: Cajal body	6.04E-04
15	GO:0000418: DNA-directed RNA polymerase IV complex	6.68E-04
16	GO:0005852: eukaryotic translation initiation factor 3 complex	7.34E-04
17	GO:0005665: DNA-directed RNA polymerase II, core complex	8.01E-04
18	GO:0032040: small-subunit processome	8.01E-04
19	GO:0005737: cytoplasm	8.52E-04
20	GO:0000419: DNA-directed RNA polymerase V complex	1.08E-03
21	GO:0005839: proteasome core complex	1.31E-03
22	GO:0000502: proteasome complex	5.48E-03
23	GO:0005886: plasma membrane	8.63E-03
24	GO:0005773: vacuole	8.65E-03
25	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.49E-02
26	GO:0022625: cytosolic large ribosomal subunit	1.68E-02
27	GO:0009506: plasmodesma	2.75E-02
28	GO:0048046: apoplast	2.83E-02