GO Enrichment Analysis of Co-expressed Genes with
AT2G19540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071433: cell wall repair | 0.00E+00 |
| 2 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 3 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 4 | GO:0006364: rRNA processing | 1.11E-06 |
| 5 | GO:0006177: GMP biosynthetic process | 3.37E-05 |
| 6 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 8.48E-05 |
| 7 | GO:0045039: protein import into mitochondrial inner membrane | 1.47E-04 |
| 8 | GO:0010197: polar nucleus fusion | 1.53E-04 |
| 9 | GO:0007276: gamete generation | 2.18E-04 |
| 10 | GO:0009855: determination of bilateral symmetry | 2.18E-04 |
| 11 | GO:0010188: response to microbial phytotoxin | 2.95E-04 |
| 12 | GO:0046345: abscisic acid catabolic process | 2.95E-04 |
| 13 | GO:0042273: ribosomal large subunit biogenesis | 2.95E-04 |
| 14 | GO:0051205: protein insertion into membrane | 2.95E-04 |
| 15 | GO:0006564: L-serine biosynthetic process | 3.77E-04 |
| 16 | GO:0006461: protein complex assembly | 3.77E-04 |
| 17 | GO:0000741: karyogamy | 4.63E-04 |
| 18 | GO:0045454: cell redox homeostasis | 5.03E-04 |
| 19 | GO:0080186: developmental vegetative growth | 6.47E-04 |
| 20 | GO:0006189: 'de novo' IMP biosynthetic process | 9.49E-04 |
| 21 | GO:0007338: single fertilization | 9.49E-04 |
| 22 | GO:0009553: embryo sac development | 1.07E-03 |
| 23 | GO:0010162: seed dormancy process | 1.17E-03 |
| 24 | GO:0046688: response to copper ion | 1.78E-03 |
| 25 | GO:0000027: ribosomal large subunit assembly | 2.05E-03 |
| 26 | GO:0030150: protein import into mitochondrial matrix | 2.05E-03 |
| 27 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.05E-03 |
| 28 | GO:0006825: copper ion transport | 2.19E-03 |
| 29 | GO:0051302: regulation of cell division | 2.19E-03 |
| 30 | GO:0009617: response to bacterium | 2.21E-03 |
| 31 | GO:0009294: DNA mediated transformation | 2.63E-03 |
| 32 | GO:0010091: trichome branching | 2.78E-03 |
| 33 | GO:0010501: RNA secondary structure unwinding | 3.09E-03 |
| 34 | GO:0006662: glycerol ether metabolic process | 3.25E-03 |
| 35 | GO:0009960: endosperm development | 3.25E-03 |
| 36 | GO:0009567: double fertilization forming a zygote and endosperm | 4.28E-03 |
| 37 | GO:0046686: response to cadmium ion | 5.64E-03 |
| 38 | GO:0034599: cellular response to oxidative stress | 7.04E-03 |
| 39 | GO:0000154: rRNA modification | 8.82E-03 |
| 40 | GO:0009555: pollen development | 9.19E-03 |
| 41 | GO:0050832: defense response to fungus | 1.28E-02 |
| 42 | GO:0006396: RNA processing | 1.31E-02 |
| 43 | GO:0042742: defense response to bacterium | 1.87E-02 |
| 44 | GO:0009451: RNA modification | 1.92E-02 |
| 45 | GO:0015031: protein transport | 2.38E-02 |
| 46 | GO:0009409: response to cold | 2.53E-02 |
| 47 | GO:0006412: translation | 2.60E-02 |
| 48 | GO:0042254: ribosome biogenesis | 2.62E-02 |
| 49 | GO:0010200: response to chitin | 3.08E-02 |
| 50 | GO:0016192: vesicle-mediated transport | 3.12E-02 |
| 51 | GO:0044550: secondary metabolite biosynthetic process | 3.20E-02 |
| 52 | GO:0055114: oxidation-reduction process | 3.24E-02 |
| 53 | GO:0045892: negative regulation of transcription, DNA-templated | 3.46E-02 |
| 54 | GO:0006886: intracellular protein transport | 3.50E-02 |
| 55 | GO:0006629: lipid metabolic process | 3.97E-02 |
| 56 | GO:0048364: root development | 4.10E-02 |
| 57 | GO:0009793: embryo development ending in seed dormancy | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 2 | GO:0030515: snoRNA binding | 7.64E-06 |
| 3 | GO:0003746: translation elongation factor activity | 1.83E-05 |
| 4 | GO:0042134: rRNA primary transcript binding | 3.37E-05 |
| 5 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 3.37E-05 |
| 6 | GO:0015035: protein disulfide oxidoreductase activity | 7.92E-05 |
| 7 | GO:0004617: phosphoglycerate dehydrogenase activity | 8.48E-05 |
| 8 | GO:0043021: ribonucleoprotein complex binding | 8.48E-05 |
| 9 | GO:0003938: IMP dehydrogenase activity | 8.48E-05 |
| 10 | GO:0016531: copper chaperone activity | 1.47E-04 |
| 11 | GO:0000166: nucleotide binding | 1.72E-04 |
| 12 | GO:0008320: protein transmembrane transporter activity | 6.47E-04 |
| 13 | GO:0008135: translation factor activity, RNA binding | 8.45E-04 |
| 14 | GO:0001054: RNA polymerase I activity | 1.28E-03 |
| 15 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.28E-03 |
| 16 | GO:0004407: histone deacetylase activity | 2.05E-03 |
| 17 | GO:0005525: GTP binding | 2.47E-03 |
| 18 | GO:0047134: protein-disulfide reductase activity | 2.94E-03 |
| 19 | GO:0004791: thioredoxin-disulfide reductase activity | 3.42E-03 |
| 20 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 4.10E-03 |
| 21 | GO:0016597: amino acid binding | 4.64E-03 |
| 22 | GO:0004004: ATP-dependent RNA helicase activity | 5.40E-03 |
| 23 | GO:0004721: phosphoprotein phosphatase activity | 5.40E-03 |
| 24 | GO:0009055: electron carrier activity | 5.56E-03 |
| 25 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.79E-03 |
| 26 | GO:0050897: cobalt ion binding | 6.40E-03 |
| 27 | GO:0051287: NAD binding | 9.30E-03 |
| 28 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.00E-02 |
| 29 | GO:0016298: lipase activity | 1.03E-02 |
| 30 | GO:0003723: RNA binding | 1.19E-02 |
| 31 | GO:0016746: transferase activity, transferring acyl groups | 1.31E-02 |
| 32 | GO:0008026: ATP-dependent helicase activity | 1.34E-02 |
| 33 | GO:0004386: helicase activity | 1.37E-02 |
| 34 | GO:0019843: rRNA binding | 1.51E-02 |
| 35 | GO:0043531: ADP binding | 2.76E-02 |
| 36 | GO:0003729: mRNA binding | 2.78E-02 |
| 37 | GO:0004497: monooxygenase activity | 3.01E-02 |
| 38 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.62E-02 |
| 39 | GO:0003735: structural constituent of ribosome | 3.71E-02 |
| 40 | GO:0003924: GTPase activity | 3.97E-02 |
| 41 | GO:0016787: hydrolase activity | 4.00E-02 |
| 42 | GO:0004519: endonuclease activity | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0034455: t-UTP complex | 0.00E+00 |
| 3 | GO:0019034: viral replication complex | 0.00E+00 |
| 4 | GO:0005730: nucleolus | 9.73E-08 |
| 5 | GO:0032040: small-subunit processome | 3.56E-05 |
| 6 | GO:0070545: PeBoW complex | 8.48E-05 |
| 7 | GO:0030134: ER to Golgi transport vesicle | 8.48E-05 |
| 8 | GO:0031428: box C/D snoRNP complex | 4.63E-04 |
| 9 | GO:0016363: nuclear matrix | 5.53E-04 |
| 10 | GO:0005801: cis-Golgi network | 5.53E-04 |
| 11 | GO:0005739: mitochondrion | 6.01E-04 |
| 12 | GO:0030687: preribosome, large subunit precursor | 6.47E-04 |
| 13 | GO:0005736: DNA-directed RNA polymerase I complex | 9.49E-04 |
| 14 | GO:0005834: heterotrimeric G-protein complex | 9.79E-04 |
| 15 | GO:0015030: Cajal body | 1.06E-03 |
| 16 | GO:0019013: viral nucleocapsid | 1.52E-03 |
| 17 | GO:0005759: mitochondrial matrix | 1.70E-03 |
| 18 | GO:0043234: protein complex | 1.91E-03 |
| 19 | GO:0005758: mitochondrial intermembrane space | 2.05E-03 |
| 20 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.78E-03 |
| 21 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.12E-03 |
| 22 | GO:0005743: mitochondrial inner membrane | 4.82E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 4.83E-03 |
| 24 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.37E-02 |
| 25 | GO:0005829: cytosol | 1.48E-02 |
| 26 | GO:0005618: cell wall | 1.84E-02 |
| 27 | GO:0005840: ribosome | 1.96E-02 |