Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G19130

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
2GO:0010401: pectic galactan metabolic process0.00E+00
3GO:0009312: oligosaccharide biosynthetic process0.00E+00
4GO:0010793: regulation of mRNA export from nucleus0.00E+00
5GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
6GO:0010398: xylogalacturonan metabolic process0.00E+00
7GO:0006212: uracil catabolic process7.28E-07
8GO:0019483: beta-alanine biosynthetic process7.28E-07
9GO:0006468: protein phosphorylation1.66E-05
10GO:0009819: drought recovery7.49E-05
11GO:0043562: cellular response to nitrogen levels9.46E-05
12GO:0016337: single organismal cell-cell adhesion1.20E-04
13GO:0010941: regulation of cell death1.20E-04
14GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic1.20E-04
15GO:0035344: hypoxanthine transport1.20E-04
16GO:0071366: cellular response to indolebutyric acid stimulus1.20E-04
17GO:0002143: tRNA wobble position uridine thiolation1.20E-04
18GO:0031338: regulation of vesicle fusion1.20E-04
19GO:0098721: uracil import across plasma membrane1.20E-04
20GO:0098702: adenine import across plasma membrane1.20E-04
21GO:0098710: guanine import across plasma membrane1.20E-04
22GO:0006024: glycosaminoglycan biosynthetic process2.77E-04
23GO:0051262: protein tetramerization2.77E-04
24GO:0050684: regulation of mRNA processing2.77E-04
25GO:0052541: plant-type cell wall cellulose metabolic process2.77E-04
26GO:0030010: establishment of cell polarity2.77E-04
27GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine2.77E-04
28GO:0015012: heparan sulfate proteoglycan biosynthetic process2.77E-04
29GO:0010498: proteasomal protein catabolic process4.58E-04
30GO:0042344: indole glucosinolate catabolic process4.58E-04
31GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening4.58E-04
32GO:0032784: regulation of DNA-templated transcription, elongation4.58E-04
33GO:0061158: 3'-UTR-mediated mRNA destabilization4.58E-04
34GO:0080055: low-affinity nitrate transport4.58E-04
35GO:0042780: tRNA 3'-end processing4.58E-04
36GO:0090630: activation of GTPase activity4.58E-04
37GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic4.58E-04
38GO:0031348: negative regulation of defense response5.41E-04
39GO:0046777: protein autophosphorylation6.03E-04
40GO:2001289: lipid X metabolic process6.57E-04
41GO:0070301: cellular response to hydrogen peroxide6.57E-04
42GO:0072334: UDP-galactose transmembrane transport6.57E-04
43GO:0072583: clathrin-dependent endocytosis6.57E-04
44GO:0002679: respiratory burst involved in defense response6.57E-04
45GO:0048194: Golgi vesicle budding6.57E-04
46GO:0033320: UDP-D-xylose biosynthetic process8.72E-04
47GO:0006665: sphingolipid metabolic process1.10E-03
48GO:0006090: pyruvate metabolic process1.10E-03
49GO:0005513: detection of calcium ion1.10E-03
50GO:0042732: D-xylose metabolic process1.35E-03
51GO:1900425: negative regulation of defense response to bacterium1.35E-03
52GO:0015691: cadmium ion transport1.35E-03
53GO:0006777: Mo-molybdopterin cofactor biosynthetic process1.35E-03
54GO:0010150: leaf senescence1.42E-03
55GO:0015977: carbon fixation1.61E-03
56GO:0009612: response to mechanical stimulus1.61E-03
57GO:0042742: defense response to bacterium1.63E-03
58GO:0009817: defense response to fungus, incompatible interaction1.81E-03
59GO:0008219: cell death1.81E-03
60GO:0043090: amino acid import1.89E-03
61GO:0006499: N-terminal protein myristoylation1.99E-03
62GO:1900150: regulation of defense response to fungus2.19E-03
63GO:0006099: tricarboxylic acid cycle2.38E-03
64GO:0006002: fructose 6-phosphate metabolic process2.50E-03
65GO:0006075: (1->3)-beta-D-glucan biosynthetic process2.50E-03
66GO:0009880: embryonic pattern specification2.50E-03
67GO:0009051: pentose-phosphate shunt, oxidative branch2.82E-03
68GO:0009821: alkaloid biosynthetic process2.82E-03
69GO:0051865: protein autoubiquitination2.82E-03
70GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway3.16E-03
71GO:0042761: very long-chain fatty acid biosynthetic process3.16E-03
72GO:0010200: response to chitin3.37E-03
73GO:0010629: negative regulation of gene expression3.51E-03
74GO:0006995: cellular response to nitrogen starvation3.51E-03
75GO:0009870: defense response signaling pathway, resistance gene-dependent3.51E-03
76GO:0052544: defense response by callose deposition in cell wall3.88E-03
77GO:0015706: nitrate transport4.26E-03
78GO:0071365: cellular response to auxin stimulus4.26E-03
79GO:0006096: glycolytic process4.64E-03
80GO:0010102: lateral root morphogenesis4.64E-03
81GO:0006807: nitrogen compound metabolic process4.64E-03
82GO:0006108: malate metabolic process4.64E-03
83GO:0055046: microgametogenesis4.64E-03
84GO:0009620: response to fungus5.10E-03
85GO:0009225: nucleotide-sugar metabolic process5.46E-03
86GO:0010053: root epidermal cell differentiation5.46E-03
87GO:2000377: regulation of reactive oxygen species metabolic process6.32E-03
88GO:0006874: cellular calcium ion homeostasis6.76E-03
89GO:0061077: chaperone-mediated protein folding7.22E-03
90GO:0051260: protein homooligomerization7.22E-03
91GO:0010227: floral organ abscission8.18E-03
92GO:0009561: megagametogenesis8.66E-03
93GO:0045490: pectin catabolic process9.64E-03
94GO:0010087: phloem or xylem histogenesis9.68E-03
95GO:0045489: pectin biosynthetic process1.02E-02
96GO:0008360: regulation of cell shape1.02E-02
97GO:0046323: glucose import1.02E-02
98GO:0009738: abscisic acid-activated signaling pathway1.05E-02
99GO:0048544: recognition of pollen1.07E-02
100GO:0006470: protein dephosphorylation1.10E-02
101GO:0006623: protein targeting to vacuole1.13E-02
102GO:0009749: response to glucose1.13E-02
103GO:0009617: response to bacterium1.15E-02
104GO:0071554: cell wall organization or biogenesis1.18E-02
105GO:0000302: response to reactive oxygen species1.18E-02
106GO:0007264: small GTPase mediated signal transduction1.24E-02
107GO:0019760: glucosinolate metabolic process1.36E-02
108GO:0010252: auxin homeostasis1.36E-02
109GO:0051607: defense response to virus1.47E-02
110GO:0001666: response to hypoxia1.54E-02
111GO:0009615: response to virus1.54E-02
112GO:0009607: response to biotic stimulus1.60E-02
113GO:0009627: systemic acquired resistance1.66E-02
114GO:0042128: nitrate assimilation1.66E-02
115GO:0006950: response to stress1.72E-02
116GO:0048366: leaf development1.76E-02
117GO:0007275: multicellular organism development1.88E-02
118GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.92E-02
119GO:0010311: lateral root formation1.92E-02
120GO:0048527: lateral root development2.05E-02
121GO:0006865: amino acid transport2.12E-02
122GO:0006886: intracellular protein transport2.30E-02
123GO:0009744: response to sucrose2.63E-02
124GO:0071555: cell wall organization2.67E-02
125GO:0000209: protein polyubiquitination2.70E-02
126GO:0009751: response to salicylic acid2.71E-02
127GO:0006855: drug transmembrane transport2.93E-02
128GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.01E-02
129GO:0006952: defense response3.16E-02
130GO:0006486: protein glycosylation3.25E-02
131GO:0009736: cytokinin-activated signaling pathway3.25E-02
132GO:0006857: oligopeptide transport3.41E-02
133GO:0006417: regulation of translation3.49E-02
134GO:0009626: plant-type hypersensitive response3.83E-02
135GO:0042545: cell wall modification4.09E-02
136GO:0018105: peptidyl-serine phosphorylation4.26E-02
137GO:0051726: regulation of cell cycle4.35E-02
138GO:0009742: brassinosteroid mediated signaling pathway4.35E-02
RankGO TermAdjusted P value
1GO:0015370: solute:sodium symporter activity0.00E+00
2GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
3GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
4GO:0003837: beta-ureidopropionase activity0.00E+00
5GO:0070577: lysine-acetylated histone binding0.00E+00
6GO:0015575: mannitol transmembrane transporter activity0.00E+00
7GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
8GO:0015591: D-ribose transmembrane transporter activity0.00E+00
9GO:0015148: D-xylose transmembrane transporter activity0.00E+00
10GO:0004157: dihydropyrimidinase activity0.00E+00
11GO:0016504: peptidase activator activity0.00E+00
12GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
13GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
14GO:0015576: sorbitol transmembrane transporter activity0.00E+00
15GO:0016301: kinase activity6.70E-06
16GO:0005524: ATP binding9.60E-05
17GO:0032050: clathrin heavy chain binding1.20E-04
18GO:0015208: guanine transmembrane transporter activity1.20E-04
19GO:0015294: solute:cation symporter activity1.20E-04
20GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity1.20E-04
21GO:0015207: adenine transmembrane transporter activity1.20E-04
22GO:0015168: glycerol transmembrane transporter activity1.20E-04
23GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity1.20E-04
24GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.59E-04
25GO:0004674: protein serine/threonine kinase activity2.70E-04
26GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters2.77E-04
27GO:0015293: symporter activity3.66E-04
28GO:0008265: Mo-molybdopterin cofactor sulfurase activity4.58E-04
29GO:0042781: 3'-tRNA processing endoribonuclease activity4.58E-04
30GO:0004557: alpha-galactosidase activity4.58E-04
31GO:0008964: phosphoenolpyruvate carboxylase activity4.58E-04
32GO:0003955: NAD(P)H dehydrogenase (quinone) activity4.58E-04
33GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity4.58E-04
34GO:0052692: raffinose alpha-galactosidase activity4.58E-04
35GO:0080054: low-affinity nitrate transmembrane transporter activity4.58E-04
36GO:0005354: galactose transmembrane transporter activity6.57E-04
37GO:0015086: cadmium ion transmembrane transporter activity6.57E-04
38GO:0004792: thiosulfate sulfurtransferase activity6.57E-04
39GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor8.72E-04
40GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity8.72E-04
41GO:0015210: uracil transmembrane transporter activity8.72E-04
42GO:0019199: transmembrane receptor protein kinase activity8.72E-04
43GO:0070628: proteasome binding8.72E-04
44GO:0004470: malic enzyme activity8.72E-04
45GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor8.72E-04
46GO:0015204: urea transmembrane transporter activity8.72E-04
47GO:0005516: calmodulin binding9.76E-04
48GO:0005459: UDP-galactose transmembrane transporter activity1.10E-03
49GO:0015145: monosaccharide transmembrane transporter activity1.10E-03
50GO:0008641: small protein activating enzyme activity1.10E-03
51GO:0008948: oxaloacetate decarboxylase activity1.10E-03
52GO:0017137: Rab GTPase binding1.10E-03
53GO:0048040: UDP-glucuronate decarboxylase activity1.35E-03
54GO:0035252: UDP-xylosyltransferase activity1.35E-03
55GO:0070403: NAD+ binding1.61E-03
56GO:0004012: phospholipid-translocating ATPase activity1.61E-03
57GO:0003872: 6-phosphofructokinase activity1.89E-03
58GO:0005096: GTPase activator activity1.89E-03
59GO:0004714: transmembrane receptor protein tyrosine kinase activity2.19E-03
60GO:0000287: magnesium ion binding2.40E-03
61GO:0003843: 1,3-beta-D-glucan synthase activity2.50E-03
62GO:0008138: protein tyrosine/serine/threonine phosphatase activity2.82E-03
63GO:0004743: pyruvate kinase activity3.16E-03
64GO:0030955: potassium ion binding3.16E-03
65GO:0016844: strictosidine synthase activity3.16E-03
66GO:0004713: protein tyrosine kinase activity3.51E-03
67GO:0030246: carbohydrate binding3.64E-03
68GO:0000175: 3'-5'-exoribonuclease activity4.64E-03
69GO:0004535: poly(A)-specific ribonuclease activity5.04E-03
70GO:0005217: intracellular ligand-gated ion channel activity5.46E-03
71GO:0004970: ionotropic glutamate receptor activity5.46E-03
72GO:0004725: protein tyrosine phosphatase activity5.88E-03
73GO:0005528: FK506 binding6.32E-03
74GO:0035251: UDP-glucosyltransferase activity7.22E-03
75GO:0004540: ribonuclease activity7.22E-03
76GO:0008408: 3'-5' exonuclease activity7.22E-03
77GO:0015144: carbohydrate transmembrane transporter activity8.35E-03
78GO:0003727: single-stranded RNA binding8.66E-03
79GO:0046872: metal ion binding9.28E-03
80GO:0005351: sugar:proton symporter activity9.42E-03
81GO:0043565: sequence-specific DNA binding9.53E-03
82GO:0001085: RNA polymerase II transcription factor binding1.02E-02
83GO:0010181: FMN binding1.07E-02
84GO:0005355: glucose transmembrane transporter activity1.07E-02
85GO:0016413: O-acetyltransferase activity1.47E-02
86GO:0051213: dioxygenase activity1.54E-02
87GO:0008375: acetylglucosaminyltransferase activity1.66E-02
88GO:0009931: calcium-dependent protein serine/threonine kinase activity1.66E-02
89GO:0004683: calmodulin-dependent protein kinase activity1.72E-02
90GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.05E-02
91GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.19E-02
92GO:0003993: acid phosphatase activity2.26E-02
93GO:0004712: protein serine/threonine/tyrosine kinase activity2.33E-02
94GO:0005509: calcium ion binding2.42E-02
95GO:0004722: protein serine/threonine phosphatase activity2.44E-02
96GO:0005198: structural molecule activity2.85E-02
97GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.93E-02
98GO:0003824: catalytic activity3.00E-02
99GO:0051287: NAD binding3.01E-02
100GO:0015171: amino acid transmembrane transporter activity3.49E-02
101GO:0045330: aspartyl esterase activity3.49E-02
102GO:0030599: pectinesterase activity4.00E-02
103GO:0022857: transmembrane transporter activity4.00E-02
104GO:0016887: ATPase activity4.24E-02
105GO:0016746: transferase activity, transferring acyl groups4.26E-02
106GO:0004672: protein kinase activity4.29E-02
107GO:0003729: mRNA binding4.36E-02
108GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.99E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane4.06E-07
2GO:0016021: integral component of membrane1.44E-06
3GO:0045252: oxoglutarate dehydrogenase complex1.20E-04
4GO:0030014: CCR4-NOT complex1.20E-04
5GO:0016020: membrane2.02E-04
6GO:0005794: Golgi apparatus4.42E-04
7GO:0005945: 6-phosphofructokinase complex1.10E-03
8GO:0030173: integral component of Golgi membrane1.61E-03
9GO:0000148: 1,3-beta-D-glucan synthase complex2.50E-03
10GO:0017119: Golgi transport complex3.51E-03
11GO:0030125: clathrin vesicle coat3.51E-03
12GO:0005802: trans-Golgi network4.75E-03
13GO:0012505: endomembrane system5.42E-03
14GO:0030176: integral component of endoplasmic reticulum membrane5.46E-03
15GO:0005795: Golgi stack5.46E-03
16GO:0005839: proteasome core complex7.22E-03
17GO:0005773: vacuole1.02E-02
18GO:0009504: cell plate1.13E-02
19GO:0071944: cell periphery1.30E-02
20GO:0005774: vacuolar membrane1.43E-02
21GO:0005667: transcription factor complex1.66E-02
22GO:0005829: cytosol1.68E-02
23GO:0005783: endoplasmic reticulum1.74E-02
24GO:0000786: nucleosome2.12E-02
25GO:0005768: endosome2.34E-02
26GO:0009506: plasmodesma2.37E-02
27GO:0005887: integral component of plasma membrane3.72E-02
28GO:0000139: Golgi membrane3.89E-02
29GO:0005789: endoplasmic reticulum membrane4.51E-02
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Gene type



Gene DE type