co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G18170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0006105: succinate metabolic process	0.00E+00
3	GO:0043171: peptide catabolic process	0.00E+00
4	GO:0010219: regulation of vernalization response	0.00E+00
5	GO:0019484: beta-alanine catabolic process	0.00E+00
6	GO:0009651: response to salt stress	2.52E-07
7	GO:0006979: response to oxidative stress	4.26E-06
8	GO:0006970: response to osmotic stress	5.98E-06
9	GO:0000380: alternative mRNA splicing, via spliceosome	6.50E-06
10	GO:0009450: gamma-aminobutyric acid catabolic process	6.10E-05
11	GO:0010184: cytokinin transport	6.10E-05
12	GO:0046520: sphingoid biosynthetic process	6.10E-05
13	GO:0009865: pollen tube adhesion	6.10E-05
14	GO:0006540: glutamate decarboxylation to succinate	6.10E-05
15	GO:0006369: termination of RNA polymerase II transcription	6.10E-05
16	GO:0051603: proteolysis involved in cellular protein catabolic process	1.45E-04
17	GO:0010033: response to organic substance	1.48E-04
18	GO:0048833: specification of floral organ number	1.48E-04
19	GO:0001736: establishment of planar polarity	1.48E-04
20	GO:0030029: actin filament-based process	2.51E-04
21	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	2.51E-04
22	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.87E-04
23	GO:0009414: response to water deprivation	3.11E-04
24	GO:0006624: vacuolar protein processing	3.65E-04
25	GO:0006020: inositol metabolic process	3.65E-04
26	GO:0015749: monosaccharide transport	3.65E-04
27	GO:1901332: negative regulation of lateral root development	3.65E-04
28	GO:0006882: cellular zinc ion homeostasis	3.65E-04
29	GO:0015743: malate transport	4.88E-04
30	GO:0048442: sepal development	4.88E-04
31	GO:0006536: glutamate metabolic process	4.88E-04
32	GO:0006878: cellular copper ion homeostasis	4.88E-04
33	GO:0006646: phosphatidylethanolamine biosynthetic process	4.88E-04
34	GO:0043097: pyrimidine nucleoside salvage	6.19E-04
35	GO:0006950: response to stress	6.93E-04
36	GO:0035194: posttranscriptional gene silencing by RNA	7.57E-04
37	GO:0006206: pyrimidine nucleobase metabolic process	7.57E-04
38	GO:0010043: response to zinc ion	8.77E-04
39	GO:0010119: regulation of stomatal movement	8.77E-04
40	GO:0045087: innate immune response	9.58E-04
41	GO:0016051: carbohydrate biosynthetic process	9.58E-04
42	GO:0098869: cellular oxidant detoxification	1.05E-03
43	GO:0009395: phospholipid catabolic process	1.05E-03
44	GO:0006333: chromatin assembly or disassembly	1.05E-03
45	GO:0006491: N-glycan processing	1.21E-03
46	GO:0032508: DNA duplex unwinding	1.21E-03
47	GO:0009926: auxin polar transport	1.22E-03
48	GO:0009737: response to abscisic acid	1.24E-03
49	GO:0001510: RNA methylation	1.38E-03
50	GO:0009051: pentose-phosphate shunt, oxidative branch	1.55E-03
51	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.73E-03
52	GO:0048441: petal development	1.92E-03
53	GO:0052544: defense response by callose deposition in cell wall	2.12E-03
54	GO:0048765: root hair cell differentiation	2.12E-03
55	GO:0006396: RNA processing	2.36E-03
56	GO:0009725: response to hormone	2.52E-03
57	GO:0010102: lateral root morphogenesis	2.52E-03
58	GO:0006006: glucose metabolic process	2.52E-03
59	GO:0009409: response to cold	2.70E-03
60	GO:0048440: carpel development	2.74E-03
61	GO:0006541: glutamine metabolic process	2.74E-03
62	GO:0002237: response to molecule of bacterial origin	2.74E-03
63	GO:0005985: sucrose metabolic process	2.96E-03
64	GO:0006863: purine nucleobase transport	3.18E-03
65	GO:0046686: response to cadmium ion	3.34E-03
66	GO:0006406: mRNA export from nucleus	3.42E-03
67	GO:0009269: response to desiccation	3.89E-03
68	GO:0010150: leaf senescence	3.93E-03
69	GO:0031348: negative regulation of defense response	4.15E-03
70	GO:0006012: galactose metabolic process	4.40E-03
71	GO:0001944: vasculature development	4.40E-03
72	GO:0048443: stamen development	4.65E-03
73	GO:0045492: xylan biosynthetic process	4.65E-03
74	GO:0010501: RNA secondary structure unwinding	5.19E-03
75	GO:0046323: glucose import	5.46E-03
76	GO:0010154: fruit development	5.46E-03
77	GO:0010182: sugar mediated signaling pathway	5.46E-03
78	GO:0010183: pollen tube guidance	6.03E-03
79	GO:0008654: phospholipid biosynthetic process	6.03E-03
80	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	6.32E-03
81	GO:0006635: fatty acid beta-oxidation	6.32E-03
82	GO:0071281: cellular response to iron ion	6.91E-03
83	GO:0009723: response to ethylene	7.01E-03
84	GO:0006914: autophagy	7.21E-03
85	GO:0010286: heat acclimation	7.52E-03
86	GO:0055114: oxidation-reduction process	7.62E-03
87	GO:0001666: response to hypoxia	8.16E-03
88	GO:0010029: regulation of seed germination	8.48E-03
89	GO:0042742: defense response to bacterium	8.51E-03
90	GO:0048573: photoperiodism, flowering	9.14E-03
91	GO:0006508: proteolysis	9.35E-03
92	GO:0048481: plant ovule development	9.82E-03
93	GO:0008219: cell death	9.82E-03
94	GO:0006811: ion transport	1.05E-02
95	GO:0009753: response to jasmonic acid	1.19E-02
96	GO:0006099: tricarboxylic acid cycle	1.20E-02
97	GO:0009640: photomorphogenesis	1.39E-02
98	GO:0009736: cytokinin-activated signaling pathway	1.71E-02
99	GO:0009735: response to cytokinin	1.81E-02
100	GO:0048367: shoot system development	1.97E-02
101	GO:0009626: plant-type hypersensitive response	2.02E-02
102	GO:0016310: phosphorylation	2.65E-02
103	GO:0009058: biosynthetic process	2.68E-02
104	GO:0009790: embryo development	2.88E-02
105	GO:0006633: fatty acid biosynthetic process	3.04E-02
106	GO:0007623: circadian rhythm	3.25E-02
107	GO:0010228: vegetative to reproductive phase transition of meristem	3.36E-02
108	GO:0009739: response to gibberellin	3.52E-02
109	GO:0009617: response to bacterium	3.68E-02
110	GO:0009860: pollen tube growth	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
2	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
3	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
4	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
5	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
6	GO:0009679: hexose:proton symporter activity	6.10E-05
7	GO:0000170: sphingosine hydroxylase activity	6.10E-05
8	GO:0010013: N-1-naphthylphthalamic acid binding	6.10E-05
9	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	6.10E-05
10	GO:0003867: 4-aminobutyrate transaminase activity	6.10E-05
11	GO:0070006: metalloaminopeptidase activity	6.10E-05
12	GO:0004609: phosphatidylserine decarboxylase activity	1.48E-04
13	GO:0047216: inositol 3-alpha-galactosyltransferase activity	1.48E-04
14	GO:0042284: sphingolipid delta-4 desaturase activity	1.48E-04
15	GO:0004108: citrate (Si)-synthase activity	3.65E-04
16	GO:0030527: structural constituent of chromatin	3.65E-04
17	GO:0004197: cysteine-type endopeptidase activity	4.41E-04
18	GO:0004737: pyruvate decarboxylase activity	4.88E-04
19	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.88E-04
20	GO:0005253: anion channel activity	4.88E-04
21	GO:0042277: peptide binding	4.88E-04
22	GO:0015145: monosaccharide transmembrane transporter activity	6.19E-04
23	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	6.19E-04
24	GO:0030976: thiamine pyrophosphate binding	7.57E-04
25	GO:0003950: NAD+ ADP-ribosyltransferase activity	9.01E-04
26	GO:0004849: uridine kinase activity	9.01E-04
27	GO:0004602: glutathione peroxidase activity	9.01E-04
28	GO:0016831: carboxy-lyase activity	1.05E-03
29	GO:0015140: malate transmembrane transporter activity	1.05E-03
30	GO:0004525: ribonuclease III activity	1.21E-03
31	GO:0001104: RNA polymerase II transcription cofactor activity	1.38E-03
32	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.55E-03
33	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	1.73E-03
34	GO:0004177: aminopeptidase activity	2.12E-03
35	GO:0004175: endopeptidase activity	2.74E-03
36	GO:0005345: purine nucleobase transmembrane transporter activity	3.65E-03
37	GO:0008168: methyltransferase activity	5.84E-03
38	GO:0005200: structural constituent of cytoskeleton	7.52E-03
39	GO:0005506: iron ion binding	8.34E-03
40	GO:0008375: acetylglucosaminyltransferase activity	8.81E-03
41	GO:0050897: cobalt ion binding	1.09E-02
42	GO:0003697: single-stranded DNA binding	1.16E-02
43	GO:0003993: acid phosphatase activity	1.20E-02
44	GO:0050661: NADP binding	1.27E-02
45	GO:0003729: mRNA binding	1.41E-02
46	GO:0016301: kinase activity	1.60E-02
47	GO:0003690: double-stranded DNA binding	1.76E-02
48	GO:0008234: cysteine-type peptidase activity	1.84E-02
49	GO:0016874: ligase activity	2.11E-02
50	GO:0016740: transferase activity	2.41E-02
51	GO:0016758: transferase activity, transferring hexosyl groups	2.53E-02
52	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.63E-02
53	GO:0004252: serine-type endopeptidase activity	2.78E-02
54	GO:0030170: pyridoxal phosphate binding	2.78E-02
55	GO:0015144: carbohydrate transmembrane transporter activity	2.94E-02
56	GO:0005351: sugar:proton symporter activity	3.20E-02
57	GO:0046982: protein heterodimerization activity	4.37E-02
58	GO:0000287: magnesium ion binding	4.37E-02
59	GO:0003824: catalytic activity	4.38E-02
60	GO:0016788: hydrolase activity, acting on ester bonds	4.49E-02
61	GO:0003682: chromatin binding	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0000323: lytic vacuole	2.00E-06
2	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	1.48E-04
3	GO:0005776: autophagosome	4.88E-04
4	GO:0005847: mRNA cleavage and polyadenylation specificity factor complex	6.19E-04
5	GO:0070847: core mediator complex	7.57E-04
6	GO:0016363: nuclear matrix	9.01E-04
7	GO:0031090: organelle membrane	1.55E-03
8	GO:0005764: lysosome	2.74E-03
9	GO:0005789: endoplasmic reticulum membrane	3.25E-03
10	GO:0005777: peroxisome	4.15E-03
11	GO:0031410: cytoplasmic vesicle	4.15E-03
12	GO:0005794: Golgi apparatus	6.38E-03
13	GO:0016592: mediator complex	6.61E-03
14	GO:0000785: chromatin	6.61E-03
15	GO:0005783: endoplasmic reticulum	9.88E-03
16	GO:0000786: nucleosome	1.12E-02
17	GO:0005829: cytosol	1.45E-02
18	GO:0010008: endosome membrane	1.97E-02
19	GO:0005834: heterotrimeric G-protein complex	2.02E-02
20	GO:0016021: integral component of membrane	2.41E-02
21	GO:0005802: trans-Golgi network	3.17E-02
22	GO:0009705: plant-type vacuole membrane	3.25E-02
23	GO:0005615: extracellular space	3.52E-02
24	GO:0005768: endosome	3.60E-02
25	GO:0048046: apoplast	4.31E-02
26	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.73E-02
27	GO:0005886: plasma membrane	4.88E-02