co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G16600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
3	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
4	GO:0080056: petal vascular tissue pattern formation	0.00E+00
5	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
6	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
7	GO:0010401: pectic galactan metabolic process	0.00E+00
8	GO:0043687: post-translational protein modification	0.00E+00
9	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
10	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
11	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
12	GO:0032324: molybdopterin cofactor biosynthetic process	0.00E+00
13	GO:0051553: flavone biosynthetic process	0.00E+00
14	GO:0006024: glycosaminoglycan biosynthetic process	1.59E-06
15	GO:0015012: heparan sulfate proteoglycan biosynthetic process	1.59E-06
16	GO:0000187: activation of MAPK activity	1.35E-05
17	GO:0018279: protein N-linked glycosylation via asparagine	4.05E-05
18	GO:0006468: protein phosphorylation	5.61E-05
19	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	6.00E-05
20	GO:2000037: regulation of stomatal complex patterning	8.36E-05
21	GO:0006486: protein glycosylation	1.10E-04
22	GO:0006102: isocitrate metabolic process	1.43E-04
23	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.82E-04
24	GO:0016337: single organismal cell-cell adhesion	1.82E-04
25	GO:0048482: plant ovule morphogenesis	1.82E-04
26	GO:0010365: positive regulation of ethylene biosynthetic process	1.82E-04
27	GO:0006422: aspartyl-tRNA aminoacylation	1.82E-04
28	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	1.82E-04
29	GO:0002143: tRNA wobble position uridine thiolation	1.82E-04
30	GO:0032491: detection of molecule of fungal origin	1.82E-04
31	GO:0080185: effector dependent induction by symbiont of host immune response	4.10E-04
32	GO:0050684: regulation of mRNA processing	4.10E-04
33	GO:0052541: plant-type cell wall cellulose metabolic process	4.10E-04
34	GO:0006212: uracil catabolic process	4.10E-04
35	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	4.10E-04
36	GO:0030010: establishment of cell polarity	4.10E-04
37	GO:0019483: beta-alanine biosynthetic process	4.10E-04
38	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.10E-04
39	GO:0010229: inflorescence development	4.63E-04
40	GO:0006099: tricarboxylic acid cycle	5.07E-04
41	GO:0046621: negative regulation of organ growth	6.69E-04
42	GO:0015783: GDP-fucose transport	6.69E-04
43	GO:0006517: protein deglycosylation	6.69E-04
44	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	6.69E-04
45	GO:0032784: regulation of DNA-templated transcription, elongation	6.69E-04
46	GO:0042780: tRNA 3'-end processing	6.69E-04
47	GO:0000027: ribosomal large subunit assembly	7.17E-04
48	GO:0009814: defense response, incompatible interaction	9.43E-04
49	GO:0006882: cellular zinc ion homeostasis	9.55E-04
50	GO:0006515: misfolded or incompletely synthesized protein catabolic process	9.55E-04
51	GO:0002239: response to oomycetes	9.55E-04
52	GO:0010104: regulation of ethylene-activated signaling pathway	9.55E-04
53	GO:0072583: clathrin-dependent endocytosis	9.55E-04
54	GO:0006516: glycoprotein catabolic process	9.55E-04
55	GO:0002679: respiratory burst involved in defense response	9.55E-04
56	GO:0071323: cellular response to chitin	9.55E-04
57	GO:0010227: floral organ abscission	1.02E-03
58	GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly	1.27E-03
59	GO:0060548: negative regulation of cell death	1.27E-03
60	GO:0000460: maturation of 5.8S rRNA	1.27E-03
61	GO:0071219: cellular response to molecule of bacterial origin	1.27E-03
62	GO:2000038: regulation of stomatal complex development	1.27E-03
63	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.27E-03
64	GO:0010188: response to microbial phytotoxin	1.27E-03
65	GO:0009620: response to fungus	1.32E-03
66	GO:0006665: sphingolipid metabolic process	1.61E-03
67	GO:0018344: protein geranylgeranylation	1.61E-03
68	GO:0005513: detection of calcium ion	1.61E-03
69	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.61E-03
70	GO:0002229: defense response to oomycetes	1.71E-03
71	GO:0000470: maturation of LSU-rRNA	1.98E-03
72	GO:0048317: seed morphogenesis	1.98E-03
73	GO:0047484: regulation of response to osmotic stress	1.98E-03
74	GO:0009751: response to salicylic acid	2.32E-03
75	GO:0043966: histone H3 acetylation	2.38E-03
76	GO:0009612: response to mechanical stimulus	2.38E-03
77	GO:0006694: steroid biosynthetic process	2.38E-03
78	GO:0016126: sterol biosynthetic process	2.46E-03
79	GO:0048364: root development	2.52E-03
80	GO:0006413: translational initiation	2.71E-03
81	GO:0009627: systemic acquired resistance	2.74E-03
82	GO:0043090: amino acid import	2.80E-03
83	GO:0008219: cell death	3.20E-03
84	GO:0009817: defense response to fungus, incompatible interaction	3.20E-03
85	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.24E-03
86	GO:0030162: regulation of proteolysis	3.24E-03
87	GO:0006491: N-glycan processing	3.24E-03
88	GO:0006875: cellular metal ion homeostasis	3.24E-03
89	GO:0032875: regulation of DNA endoreduplication	3.24E-03
90	GO:0006470: protein dephosphorylation	3.51E-03
91	GO:0006499: N-terminal protein myristoylation	3.53E-03
92	GO:0043562: cellular response to nitrogen levels	3.71E-03
93	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.71E-03
94	GO:0006002: fructose 6-phosphate metabolic process	3.71E-03
95	GO:0009880: embryonic pattern specification	3.71E-03
96	GO:0006261: DNA-dependent DNA replication	3.71E-03
97	GO:0006367: transcription initiation from RNA polymerase II promoter	3.71E-03
98	GO:0009617: response to bacterium	3.71E-03
99	GO:0015780: nucleotide-sugar transport	4.20E-03
100	GO:0009821: alkaloid biosynthetic process	4.20E-03
101	GO:0051865: protein autoubiquitination	4.20E-03
102	GO:0042742: defense response to bacterium	4.59E-03
103	GO:0071577: zinc II ion transmembrane transport	4.71E-03
104	GO:0009086: methionine biosynthetic process	4.71E-03
105	GO:0042761: very long-chain fatty acid biosynthetic process	4.71E-03
106	GO:0006995: cellular response to nitrogen starvation	5.24E-03
107	GO:0006913: nucleocytoplasmic transport	5.79E-03
108	GO:0019684: photosynthesis, light reaction	5.79E-03
109	GO:0006352: DNA-templated transcription, initiation	5.79E-03
110	GO:0000165: MAPK cascade	6.31E-03
111	GO:0010588: cotyledon vascular tissue pattern formation	6.94E-03
112	GO:0006807: nitrogen compound metabolic process	6.94E-03
113	GO:0009736: cytokinin-activated signaling pathway	7.02E-03
114	GO:0046777: protein autophosphorylation	7.38E-03
115	GO:0044550: secondary metabolite biosynthetic process	7.54E-03
116	GO:0070588: calcium ion transmembrane transport	8.18E-03
117	GO:0010053: root epidermal cell differentiation	8.18E-03
118	GO:0042343: indole glucosinolate metabolic process	8.18E-03
119	GO:0009626: plant-type hypersensitive response	8.84E-03
120	GO:0006874: cellular calcium ion homeostasis	1.02E-02
121	GO:0032259: methylation	1.05E-02
122	GO:0009742: brassinosteroid mediated signaling pathway	1.06E-02
123	GO:0098542: defense response to other organism	1.09E-02
124	GO:0061077: chaperone-mediated protein folding	1.09E-02
125	GO:0031348: negative regulation of defense response	1.16E-02
126	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.16E-02
127	GO:0030433: ubiquitin-dependent ERAD pathway	1.16E-02
128	GO:0010087: phloem or xylem histogenesis	1.46E-02
129	GO:0042391: regulation of membrane potential	1.46E-02
130	GO:0010305: leaf vascular tissue pattern formation	1.54E-02
131	GO:0006623: protein targeting to vacuole	1.70E-02
132	GO:0010193: response to ozone	1.79E-02
133	GO:0007264: small GTPase mediated signal transduction	1.87E-02
134	GO:0030163: protein catabolic process	1.96E-02
135	GO:0009615: response to virus	2.32E-02
136	GO:0009816: defense response to bacterium, incompatible interaction	2.42E-02
137	GO:0016049: cell growth	2.71E-02
138	GO:0009813: flavonoid biosynthetic process	2.91E-02
139	GO:0048527: lateral root development	3.11E-02
140	GO:0048366: leaf development	3.16E-02
141	GO:0006865: amino acid transport	3.22E-02
142	GO:0009867: jasmonic acid mediated signaling pathway	3.32E-02
143	GO:0045087: innate immune response	3.32E-02
144	GO:0010200: response to chitin	3.44E-02
145	GO:0030001: metal ion transport	3.65E-02
146	GO:0008643: carbohydrate transport	4.21E-02
147	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.56E-02
148	GO:0006364: rRNA processing	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0015370: solute:sodium symporter activity	0.00E+00
3	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
4	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
5	GO:0003837: beta-ureidopropionase activity	0.00E+00
6	GO:0004164: diphthine synthase activity	0.00E+00
7	GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity	0.00E+00
8	GO:0061598: molybdopterin adenylyltransferase activity	0.00E+00
9	GO:0004631: phosphomevalonate kinase activity	0.00E+00
10	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
11	GO:0000247: C-8 sterol isomerase activity	0.00E+00
12	GO:0047750: cholestenol delta-isomerase activity	0.00E+00
13	GO:2001080: chitosan binding	0.00E+00
14	GO:0061599: molybdopterin molybdotransferase activity	0.00E+00
15	GO:0016301: kinase activity	1.22E-05
16	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.35E-05
17	GO:0019199: transmembrane receptor protein kinase activity	2.51E-05
18	GO:0004576: oligosaccharyl transferase activity	2.51E-05
19	GO:0004674: protein serine/threonine kinase activity	3.29E-05
20	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	4.05E-05
21	GO:0004708: MAP kinase kinase activity	1.43E-04
22	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.82E-04
23	GO:0042134: rRNA primary transcript binding	1.82E-04
24	GO:0032050: clathrin heavy chain binding	1.82E-04
25	GO:1901149: salicylic acid binding	1.82E-04
26	GO:0015085: calcium ion transmembrane transporter activity	1.82E-04
27	GO:0004815: aspartate-tRNA ligase activity	1.82E-04
28	GO:0001102: RNA polymerase II activating transcription factor binding	1.82E-04
29	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.82E-04
30	GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters	4.10E-04
31	GO:0005524: ATP binding	4.48E-04
32	GO:0005457: GDP-fucose transmembrane transporter activity	6.69E-04
33	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	6.69E-04
34	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	6.69E-04
35	GO:0042781: 3'-tRNA processing endoribonuclease activity	6.69E-04
36	GO:0004663: Rab geranylgeranyltransferase activity	6.69E-04
37	GO:0033612: receptor serine/threonine kinase binding	8.65E-04
38	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	9.55E-04
39	GO:0004792: thiosulfate sulfurtransferase activity	9.55E-04
40	GO:0015204: urea transmembrane transporter activity	1.27E-03
41	GO:0030151: molybdenum ion binding	1.61E-03
42	GO:0008641: small protein activating enzyme activity	1.61E-03
43	GO:0004040: amidase activity	1.61E-03
44	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.19E-03
45	GO:0004559: alpha-mannosidase activity	2.38E-03
46	GO:0004656: procollagen-proline 4-dioxygenase activity	2.38E-03
47	GO:0004672: protein kinase activity	2.64E-03
48	GO:0046872: metal ion binding	2.74E-03
49	GO:0003872: 6-phosphofructokinase activity	2.80E-03
50	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.24E-03
51	GO:0003743: translation initiation factor activity	3.61E-03
52	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.05E-03
53	GO:0008417: fucosyltransferase activity	4.20E-03
54	GO:0005506: iron ion binding	4.47E-03
55	GO:0016844: strictosidine synthase activity	4.71E-03
56	GO:0008168: methyltransferase activity	4.91E-03
57	GO:0004713: protein tyrosine kinase activity	5.24E-03
58	GO:0003824: catalytic activity	5.40E-03
59	GO:0015293: symporter activity	5.85E-03
60	GO:0005198: structural molecule activity	5.85E-03
61	GO:0005388: calcium-transporting ATPase activity	6.94E-03
62	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.94E-03
63	GO:0031625: ubiquitin protein ligase binding	7.77E-03
64	GO:0004190: aspartic-type endopeptidase activity	8.18E-03
65	GO:0030552: cAMP binding	8.18E-03
66	GO:0030553: cGMP binding	8.18E-03
67	GO:0017025: TBP-class protein binding	8.18E-03
68	GO:0005217: intracellular ligand-gated ion channel activity	8.18E-03
69	GO:0008061: chitin binding	8.18E-03
70	GO:0003712: transcription cofactor activity	8.18E-03
71	GO:0004970: ionotropic glutamate receptor activity	8.18E-03
72	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	9.40E-03
73	GO:0051536: iron-sulfur cluster binding	9.48E-03
74	GO:0031418: L-ascorbic acid binding	9.48E-03
75	GO:0005385: zinc ion transmembrane transporter activity	9.48E-03
76	GO:0003954: NADH dehydrogenase activity	9.48E-03
77	GO:0043130: ubiquitin binding	9.48E-03
78	GO:0005528: FK506 binding	9.48E-03
79	GO:0004722: protein serine/threonine phosphatase activity	9.58E-03
80	GO:0019825: oxygen binding	9.67E-03
81	GO:0005216: ion channel activity	1.02E-02
82	GO:0035251: UDP-glucosyltransferase activity	1.09E-02
83	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.29E-02
84	GO:0005249: voltage-gated potassium channel activity	1.46E-02
85	GO:0004402: histone acetyltransferase activity	1.46E-02
86	GO:0030551: cyclic nucleotide binding	1.46E-02
87	GO:0005509: calcium ion binding	1.46E-02
88	GO:0004527: exonuclease activity	1.54E-02
89	GO:0046873: metal ion transmembrane transporter activity	1.54E-02
90	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.62E-02
91	GO:0000166: nucleotide binding	2.30E-02
92	GO:0008375: acetylglucosaminyltransferase activity	2.51E-02
93	GO:0046982: protein heterodimerization activity	2.64E-02
94	GO:0005096: GTPase activator activity	2.91E-02
95	GO:0020037: heme binding	3.23E-02
96	GO:0030246: carbohydrate binding	3.33E-02
97	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.54E-02
98	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.44E-02
99	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005783: endoplasmic reticulum	1.47E-06
3	GO:0016021: integral component of membrane	7.58E-06
4	GO:0008250: oligosaccharyltransferase complex	4.05E-05
5	GO:0045252: oxoglutarate dehydrogenase complex	1.82E-04
6	GO:0005886: plasma membrane	3.74E-04
7	GO:0031304: intrinsic component of mitochondrial inner membrane	4.10E-04
8	GO:0000124: SAGA complex	4.10E-04
9	GO:0005968: Rab-protein geranylgeranyltransferase complex	9.55E-04
10	GO:0005768: endosome	1.00E-03
11	GO:0005794: Golgi apparatus	1.24E-03
12	GO:0005945: 6-phosphofructokinase complex	1.61E-03
13	GO:0030687: preribosome, large subunit precursor	2.80E-03
14	GO:0005789: endoplasmic reticulum membrane	2.85E-03
15	GO:0005802: trans-Golgi network	3.05E-03
16	GO:0005669: transcription factor TFIID complex	3.24E-03
17	GO:0005887: integral component of plasma membrane	3.77E-03
18	GO:0030665: clathrin-coated vesicle membrane	4.71E-03
19	GO:0031902: late endosome membrane	4.80E-03
20	GO:0016020: membrane	5.06E-03
21	GO:0017119: Golgi transport complex	5.24E-03
22	GO:0030125: clathrin vesicle coat	5.24E-03
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	5.80E-03
24	GO:0000139: Golgi membrane	7.79E-03
25	GO:0005795: Golgi stack	8.18E-03
26	GO:0043234: protein complex	8.82E-03
27	GO:0031965: nuclear membrane	1.70E-02
28	GO:0071944: cell periphery	1.96E-02
29	GO:0032580: Golgi cisterna membrane	2.05E-02
30	GO:0019005: SCF ubiquitin ligase complex	2.81E-02
31	GO:0005819: spindle	3.54E-02
32	GO:0005730: nucleolus	3.57E-02
33	GO:0005774: vacuolar membrane	3.84E-02